RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 U90926O08546 118 aa10.33□□□□□ -0.76
Col3a1-201ENSMUST00000087883 Gm21748Q3UE70 102 aa10.33□□□□□ -0.76
Col3a1-201ENSMUST00000087883 Ighv3-3A0A0A6YWL2 116 aa10.33□□□□□ -0.76
Col3a1-201ENSMUST00000087883 Gm10337F7DEP7 55 aa10.33□□□□□ -0.76
Col3a1-201ENSMUST00000087883 CenpeQ6RT24 2474 aaKnown RBP10.32□□□□□ -0.76
Col3a1-201ENSMUST00000087883 Tcf20Q9EPQ8 1987 aa10.32□□□□□ -0.76
Col3a1-201ENSMUST00000087883 Pla2g2eQ9QUL3 142 aa10.32□□□□□ -0.76
Col3a1-201ENSMUST00000087883 4930564D02RikQ9D4S4 103 aa10.32□□□□□ -0.76
Col3a1-201ENSMUST00000087883 Wfdc12Q9JHY3 85 aa10.31□□□□□ -0.76
Col3a1-201ENSMUST00000087883 A0A286YCN5 57 aa10.31□□□□□ -0.76
Col3a1-201ENSMUST00000087883 Gm10226O88253 85 aa10.31□□□□□ -0.76
Col3a1-201ENSMUST00000087883 Pip4p1Q3TWL2 284 aa10.31□□□□□ -0.76
Col3a1-201ENSMUST00000087883 Gm10647E9Q8X0 124 aa10.31□□□□□ -0.76
Col3a1-201ENSMUST00000087883 Polr2kQ63871 58 aa10.31□□□□□ -0.76
Col3a1-201ENSMUST00000087883 1700011M02RikB1AX35 88 aa10.31□□□□□ -0.76
Col3a1-201ENSMUST00000087883 Wfdc10Q3V2J9 124 aa10.31□□□□□ -0.76
Col3a1-201ENSMUST00000087883 Ighv1-5A0A0A6YWG2 117 aa10.3□□□□□ -0.76
Col3a1-201ENSMUST00000087883 Arhgef17Q80U35 2057 aa10.3□□□□□ -0.76
Col3a1-201ENSMUST00000087883 Ccdc179J3QM76 67 aa10.3□□□□□ -0.76
Col3a1-201ENSMUST00000087883 Ube2d1P61080 147 aaKnown RBP10.3□□□□□ -0.76
Col3a1-201ENSMUST00000087883 Sdk1Q3UH53 2193 aa10.3□□□□□ -0.76
Col3a1-201ENSMUST00000087883 Tcl1b5P56845 121 aa10.3□□□□□ -0.76
Col3a1-201ENSMUST00000087883 Obox2E9PXV9 151 aa10.29□□□□□ -0.76
Col3a1-201ENSMUST00000087883 Gm10577Q3UDV9 132 aa10.29□□□□□ -0.76
Col3a1-201ENSMUST00000087883 Gm20604F8WIA3 75 aa10.29□□□□□ -0.76
Col3a1-201ENSMUST00000087883 P84750 121 aa10.29□□□□□ -0.76
Col3a1-201ENSMUST00000087883 Psmb11Q8BG41 302 aa10.29□□□□□ -0.76
Col3a1-201ENSMUST00000087883 Ncor1Q60974 2453 aa10.28□□□□□ -0.76
Col3a1-201ENSMUST00000087883 PrlhG3UWC3 86 aa10.28□□□□□ -0.76
Col3a1-201ENSMUST00000087883 PlaurP35456 327 aa10.28□□□□□ -0.76
Col3a1-201ENSMUST00000087883 Ighv1-59A0A0A6YXE0 117 aa10.28□□□□□ -0.76
Col3a1-201ENSMUST00000087883 A0A286YE49 62 aa10.28□□□□□ -0.76
Col3a1-201ENSMUST00000087883 Gm19935A0A1B0GSF9 52 aa10.27□□□□□ -0.76
Col3a1-201ENSMUST00000087883 PscaP57096 123 aa10.27□□□□□ -0.76
Col3a1-201ENSMUST00000087883 SrarpQ3ULG3 163 aa10.27□□□□□ -0.76
Col3a1-201ENSMUST00000087883 Gm10322F7D7I4 111 aa10.27□□□□□ -0.77
Col3a1-201ENSMUST00000087883 1110002E22RikE0CYV9 1786 aa10.27□□□□□ -0.77
Col3a1-201ENSMUST00000087883 Nup210Q9QY81 1886 aaKnown RBP10.27□□□□□ -0.77
Col3a1-201ENSMUST00000087883 Igkv3-12A0A140T8P0 119 aa10.27□□□□□ -0.77
Col3a1-201ENSMUST00000087883 CdsnQ7TPC1 561 aa10.27□□□□□ -0.77
Col3a1-201ENSMUST00000087883 H2al1mQ9DAD9 105 aa10.27□□□□□ -0.77
Col3a1-201ENSMUST00000087883 HelzQ6DFV5 1964 aaKnown RBP10.26□□□□□ -0.77
Col3a1-201ENSMUST00000087883 Gm10490F6VBM2 120 aa10.26□□□□□ -0.77
Col3a1-201ENSMUST00000087883 Dkk4Q8VEJ3 221 aa10.26□□□□□ -0.77
Col3a1-201ENSMUST00000087883 Notch4P31695 1964 aa10.26□□□□□ -0.77
Col3a1-201ENSMUST00000087883 CnfnQ6PCW6 111 aa10.26□□□□□ -0.77
Col3a1-201ENSMUST00000087883 LhbO09108 141 aa10.26□□□□□ -0.77
Col3a1-201ENSMUST00000087883 Gm11011D3Z3L9 86 aa10.25□□□□□ -0.77
Col3a1-201ENSMUST00000087883 ColqO35348 457 aa10.25□□□□□ -0.77
Col3a1-201ENSMUST00000087883 Gvin1Q80SU7 2427 aa10.25□□□□□ -0.77
Col3a1-201ENSMUST00000087883 E130114P18RikF6S0S7 154 aa10.25□□□□□ -0.77
Col3a1-201ENSMUST00000087883 Fhl2O70433 279 aa10.25□□□□□ -0.77
Col3a1-201ENSMUST00000087883 Sec16aA2AIX1 2377 aa10.25□□□□□ -0.77
Col3a1-201ENSMUST00000087883 Wfdc15aQ8BH89 80 aa10.25□□□□□ -0.77
Col3a1-201ENSMUST00000087883 Trbv13-2A0A140T8N6 113 aa10.25□□□□□ -0.77
Col3a1-201ENSMUST00000087883 Cyyr1Q8VIH7 165 aa10.24□□□□□ -0.77
Col3a1-201ENSMUST00000087883 A830031A19RikQ8BNT5 113 aa10.24□□□□□ -0.77
Col3a1-201ENSMUST00000087883 Chchd7Q8K2Q5 85 aa10.23□□□□□ -0.77
Col3a1-201ENSMUST00000087883 H2al1kJ3QP08 105 aa10.23□□□□□ -0.77
Col3a1-201ENSMUST00000087883 Serp1Q9Z1W5 66 aa10.22□□□□□ -0.77
Col3a1-201ENSMUST00000087883 Igkv8-30A0A140T8M3 121 aa10.22□□□□□ -0.77
Col3a1-201ENSMUST00000087883 2310009B15RikA0A0A6YWI4 143 aa10.21□□□□□ -0.77
Col3a1-201ENSMUST00000087883 AgrnA2ASQ1 1950 aa10.21□□□□□ -0.77
Col3a1-201ENSMUST00000087883 Wfdc13Q5DQQ6 81 aa10.21□□□□□ -0.78
Col3a1-201ENSMUST00000087883 Cdc42se2Q8BGH7 84 aa10.21□□□□□ -0.78
Col3a1-201ENSMUST00000087883 Smrp1Q2MH31 260 aa10.2□□□□□ -0.78
Col3a1-201ENSMUST00000087883 Gm9925F6T2U3 160 aa10.2□□□□□ -0.78
Col3a1-201ENSMUST00000087883 Gpha2Q925Q5 128 aa10.19□□□□□ -0.78
Col3a1-201ENSMUST00000087883 4930524J08RikQ9CUJ5 163 aa10.19□□□□□ -0.78
Col3a1-201ENSMUST00000087883 Gm10509O88255 85 aa10.19□□□□□ -0.78
Col3a1-201ENSMUST00000087883 Q8K1L6 76 aa10.19□□□□□ -0.78
Col3a1-201ENSMUST00000087883 SycnQ8VCK7 134 aa10.19□□□□□ -0.78
Col3a1-201ENSMUST00000087883 Ube2d3P61079 147 aa10.18□□□□□ -0.78
Col3a1-201ENSMUST00000087883 Ube2d2P62838 147 aa10.18□□□□□ -0.78
Col3a1-201ENSMUST00000087883 Gm10267M0QWD8 85 aa10.18□□□□□ -0.78
Col3a1-201ENSMUST00000087883 Fer1l4A3KGK3 1992 aa10.18□□□□□ -0.78
Col3a1-201ENSMUST00000087883 SonQ9QX47 2444 aaKnown RBP10.17□□□□□ -0.78
Col3a1-201ENSMUST00000087883 Ifitm6A0A1B0GS75 124 aa10.17□□□□□ -0.78
Col3a1-201ENSMUST00000087883 DysfQ9ESD7 2090 aa10.16□□□□□ -0.78
Col3a1-201ENSMUST00000087883 Gm6899Q3USS0 134 aa10.16□□□□□ -0.78
Col3a1-201ENSMUST00000087883 Med13lQ6JPI3 2207 aa10.16□□□□□ -0.78
Col3a1-201ENSMUST00000087883 Defb38Q7TNV7 63 aa10.16□□□□□ -0.78
Col3a1-201ENSMUST00000087883 Wdr90Q6ZPG2 1874 aa10.16□□□□□ -0.78
Col3a1-201ENSMUST00000087883 B430305J03RikQ8BQQ8 176 aa10.16□□□□□ -0.78
Col3a1-201ENSMUST00000087883 Gm26566Q8CAC1 153 aa10.16□□□□□ -0.78
Col3a1-201ENSMUST00000087883 Wnk1P83741 2377 aa10.15□□□□□ -0.78
Col3a1-201ENSMUST00000087883 Rpl28P41105 137 aaKnown RBP10.15□□□□□ -0.78
Col3a1-201ENSMUST00000087883 Lce6aD3YV94 81 aa10.15□□□□□ -0.78
Col3a1-201ENSMUST00000087883 FshbQ60687 130 aa10.15□□□□□ -0.78
Col3a1-201ENSMUST00000087883 Defb42Q8BVB5 75 aa10.15□□□□□ -0.78
Col3a1-201ENSMUST00000087883 Gm5142Q8C5X9 133 aa10.15□□□□□ -0.78
Col3a1-201ENSMUST00000087883 Ep300B2RWS6 2412 aa10.15□□□□□ -0.79
Col3a1-201ENSMUST00000087883 Nupr2Q497P3 102 aa10.15□□□□□ -0.79
Col3a1-201ENSMUST00000087883 TeppQ6IMH0 216 aa10.15□□□□□ -0.79
Col3a1-201ENSMUST00000087883 Prrc2aQ7TSC1 2158 aaKnown RBP10.14□□□□□ -0.79
Col3a1-201ENSMUST00000087883 Ovol3D3YYM0 189 aa10.14□□□□□ -0.79
Col3a1-201ENSMUST00000087883 P06329 120 aa10.14□□□□□ -0.79
Col3a1-201ENSMUST00000087883 Sprr2jO70561 109 aa10.14□□□□□ -0.79
Col3a1-201ENSMUST00000087883 1700056E22RikF7CNM6 234 aa10.14□□□□□ -0.79
Col3a1-201ENSMUST00000087883 Gm8439G3UWA7 96 aa10.14□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 131.4 ms