RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Chd9Q8BYH8 2885 aa7.1□□□□□ -1.27
Pcdh1-201ENSMUST00000057185 March3Q8BRX9 218 aa7.1□□□□□ -1.27
Pcdh1-201ENSMUST00000057185 Igkv4-62A0A0G2JDW9 117 aa7.09□□□□□ -1.27
Pcdh1-201ENSMUST00000057185 P01729 129 aa7.09□□□□□ -1.27
Pcdh1-201ENSMUST00000057185 Hbb-b2P02089 147 aa7.09□□□□□ -1.27
Pcdh1-201ENSMUST00000057185 Defa25Q5G864 92 aa7.09□□□□□ -1.27
Pcdh1-201ENSMUST00000057185 Igfn1Q3KNY0 2849 aa7.09□□□□□ -1.27
Pcdh1-201ENSMUST00000057185 Nf1Q04690 2841 aa7.09□□□□□ -1.27
Pcdh1-201ENSMUST00000057185 Igkv4-78A0A0A6YYE5 119 aa7.09□□□□□ -1.27
Pcdh1-201ENSMUST00000057185 A930009A15RikG3UYI6 118 aa7.09□□□□□ -1.27
Pcdh1-201ENSMUST00000057185 Rpl32P62911 135 aaKnown RBP7.09□□□□□ -1.27
Pcdh1-201ENSMUST00000057185 Wdr38Q9D994 303 aa7.09□□□□□ -1.27
Pcdh1-201ENSMUST00000057185 Ly6hQ9WUC3 139 aa7.09□□□□□ -1.27
Pcdh1-201ENSMUST00000057185 P01823 113 aa7.09□□□□□ -1.27
Pcdh1-201ENSMUST00000057185 Defb2P82020 71 aa7.09□□□□□ -1.27
Pcdh1-201ENSMUST00000057185 BC025920Q3US60 128 aa7.09□□□□□ -1.27
Pcdh1-201ENSMUST00000057185 Foxc1Q61572 553 aa7.09□□□□□ -1.27
Pcdh1-201ENSMUST00000057185 Igkv1-35A0A0G2JDE5 120 aa7.08□□□□□ -1.28
Pcdh1-201ENSMUST00000057185 Trav13d-4A0A0G2JFX3 110 aa7.08□□□□□ -1.28
Pcdh1-201ENSMUST00000057185 Igkv6-13A0A0G2JGY3 119 aa7.08□□□□□ -1.28
Pcdh1-201ENSMUST00000057185 4930442H23RikQ9D5G7 103 aa7.08□□□□□ -1.28
Pcdh1-201ENSMUST00000057185 Cdip1Q9DB75 208 aa7.08□□□□□ -1.28
Pcdh1-201ENSMUST00000057185 Q99M08 65 aa7.08□□□□□ -1.28
Pcdh1-201ENSMUST00000057185 Spry2Q9QXV8 315 aa7.08□□□□□ -1.28
Pcdh1-201ENSMUST00000057185 NpwA0A1L1STR8 176 aa7.08□□□□□ -1.28
Pcdh1-201ENSMUST00000057185 Igkv1-99F6XWB2 120 aa7.08□□□□□ -1.28
Pcdh1-201ENSMUST00000057185 CicQ924A2 2510 aa7.07□□□□□ -1.28
Pcdh1-201ENSMUST00000057185 Rnase1P00683 149 aa7.07□□□□□ -1.28
Pcdh1-201ENSMUST00000057185 Fam110dQ80X91 271 aa7.07□□□□□ -1.28
Pcdh1-201ENSMUST00000057185 Muc4Q8JZM8 3443 aa7.07□□□□□ -1.28
Pcdh1-201ENSMUST00000057185 Defa7P50705 93 aa7.07□□□□□ -1.28
Pcdh1-201ENSMUST00000057185 Gm904Q3V2L5 102 aa7.07□□□□□ -1.28
Pcdh1-201ENSMUST00000057185 AtrQ9JKK8 2635 aa7.07□□□□□ -1.28
Pcdh1-201ENSMUST00000057185 Cmya5Q70KF4 3739 aa7.07□□□□□ -1.28
Pcdh1-201ENSMUST00000057185 Trav13-1A0A075B644 110 aa7.07□□□□□ -1.28
Pcdh1-201ENSMUST00000057185 MalO09198 153 aa7.07□□□□□ -1.28
Pcdh1-201ENSMUST00000057185 AngP21570 145 aa7.07□□□□□ -1.28
Pcdh1-201ENSMUST00000057185 4930564D02RikQ9D4S4 103 aa7.07□□□□□ -1.28
Pcdh1-201ENSMUST00000057185 Ighv1-63A0A075B5X2 117 aa7.06□□□□□ -1.28
Pcdh1-201ENSMUST00000057185 Ighv2-6-8A0A0A6YWY9 116 aa7.06□□□□□ -1.28
Pcdh1-201ENSMUST00000057185 Il19Q8CJ70 176 aa7.06□□□□□ -1.28
Pcdh1-201ENSMUST00000057185 Psmb8P28063 276 aa7.06□□□□□ -1.28
Pcdh1-201ENSMUST00000057185 Igkv4-79A0A075B5L8 119 aa7.06□□□□□ -1.28
Pcdh1-201ENSMUST00000057185 Trav13n-2A0A0G2JF93 110 aa7.06□□□□□ -1.28
Pcdh1-201ENSMUST00000057185 CdsnQ7TPC1 561 aa7.06□□□□□ -1.28
Pcdh1-201ENSMUST00000057185 Gm10509O88255 85 aa7.05□□□□□ -1.28
Pcdh1-201ENSMUST00000057185 Pglyrp4Q0VB07 374 aa7.05□□□□□ -1.28
Pcdh1-201ENSMUST00000057185 Ss18l2Q9D174 77 aa7.05□□□□□ -1.28
Pcdh1-201ENSMUST00000057185 LrbaQ9ESE1 2856 aa7.05□□□□□ -1.28
Pcdh1-201ENSMUST00000057185 PemtQ61907 199 aa7.05□□□□□ -1.28
Pcdh1-201ENSMUST00000057185 Vmo1Q5SXG7 201 aa7.04□□□□□ -1.28
Pcdh1-201ENSMUST00000057185 Spata25Q9DA57 226 aa7.04□□□□□ -1.28
Pcdh1-201ENSMUST00000057185 Ighv1-5A0A0A6YWG2 117 aa7.04□□□□□ -1.28
Pcdh1-201ENSMUST00000057185 Hist1h4aP62806 103 aaKnown RBP7.04□□□□□ -1.28
Pcdh1-201ENSMUST00000057185 NipblQ6KCD5 2798 aaKnown RBP7.04□□□□□ -1.28
Pcdh1-201ENSMUST00000057185 Dand5Q76LW6 185 aa7.04□□□□□ -1.28
Pcdh1-201ENSMUST00000057185 Gm20726G3UX18 150 aa7.03□□□□□ -1.28
Pcdh1-201ENSMUST00000057185 1700010B08RikQ9DAI7 102 aa7.03□□□□□ -1.28
Pcdh1-201ENSMUST00000057185 Trav13-2A0A075B649 110 aa7.03□□□□□ -1.28
Pcdh1-201ENSMUST00000057185 Gm16381A0A1Y7VKT9 73 aa7.03□□□□□ -1.28
Pcdh1-201ENSMUST00000057185 Gm10300Q8C8P7 189 aa7.03□□□□□ -1.28
Pcdh1-201ENSMUST00000057185 Ighv1-62-1A0A075B5U3 116 aa7.03□□□□□ -1.28
Pcdh1-201ENSMUST00000057185 Trav4d-3A0A075B625 110 aa7.02□□□□□ -1.29
Pcdh1-201ENSMUST00000057185 Trav11A0A0B4J1J9 114 aa7.02□□□□□ -1.29
Pcdh1-201ENSMUST00000057185 Gm867A0A1W2P7T4 151 aa7.02□□□□□ -1.29
Pcdh1-201ENSMUST00000057185 Gm3443F7CCV5 94 aa7.02□□□□□ -1.29
Pcdh1-201ENSMUST00000057185 Fgfbp3Q1HCM0 245 aa7.02□□□□□ -1.29
Pcdh1-201ENSMUST00000057185 Shisa2Q8QZV2 295 aa7.02□□□□□ -1.29
Pcdh1-201ENSMUST00000057185 Smim20D3Z7Q2 69 aa7.01□□□□□ -1.29
Pcdh1-201ENSMUST00000057185 P01745 121 aa7.01□□□□□ -1.29
Pcdh1-201ENSMUST00000057185 E130218I03RikA0A0U1RNU5 63 aa7.01□□□□□ -1.29
Pcdh1-201ENSMUST00000057185 Krtap27-1E9PX37 202 aa7.01□□□□□ -1.29
Pcdh1-201ENSMUST00000057185 Lage3Q9CR70 148 aa7.01□□□□□ -1.29
Pcdh1-201ENSMUST00000057185 Trav14d-3-dv8A0A075B619 120 aa7.01□□□□□ -1.29
Pcdh1-201ENSMUST00000057185 Defa4P28311 92 aa7.01□□□□□ -1.29
Pcdh1-201ENSMUST00000057185 Cox6b1P56391 86 aaKnown RBP7.01□□□□□ -1.29
Pcdh1-201ENSMUST00000057185 4930432M17RikQ3V0W9 174 aa7.01□□□□□ -1.29
Pcdh1-201ENSMUST00000057185 Celsr2Q9R0M0 2920 aa7.01□□□□□ -1.29
Pcdh1-201ENSMUST00000057185 Gm10322F7D7I4 111 aa7□□□□□ -1.29
Pcdh1-201ENSMUST00000057185 Xcl1P47993 114 aa7□□□□□ -1.29
Pcdh1-201ENSMUST00000057185 Igkv4-68A0A0B4J1I7 117 aa7□□□□□ -1.29
Pcdh1-201ENSMUST00000057185 Tmem86bQ497J1 226 aa7□□□□□ -1.29
Pcdh1-201ENSMUST00000057185 Gm9747Q810H1 104 aa7□□□□□ -1.29
Pcdh1-201ENSMUST00000057185 3110070M22RikQ9DAQ7 118 aa7□□□□□ -1.29
Pcdh1-201ENSMUST00000057185 PtprqP0C5E4 2300 aa7□□□□□ -1.29
Pcdh1-201ENSMUST00000057185 Trav4-3A0A0B4J1K1 110 aa7□□□□□ -1.29
Pcdh1-201ENSMUST00000057185 Gm10647E9Q8X0 124 aa7□□□□□ -1.29
Pcdh1-201ENSMUST00000057185 Morn3Q8C5T4 241 aa7□□□□□ -1.29
Pcdh1-201ENSMUST00000057185 Igkv8-16A0A0G2JDG9 121 aa6.99□□□□□ -1.29
Pcdh1-201ENSMUST00000057185 1700011M02RikB1AX35 88 aa6.99□□□□□ -1.29
Pcdh1-201ENSMUST00000057185 MplkipQ9D011 178 aa6.99□□□□□ -1.29
Pcdh1-201ENSMUST00000057185 Gm8439G3UWA7 96 aa6.99□□□□□ -1.29
Pcdh1-201ENSMUST00000057185 P01755 137 aa6.99□□□□□ -1.29
Pcdh1-201ENSMUST00000057185 CenpwQ3URR0 86 aa6.99□□□□□ -1.29
Pcdh1-201ENSMUST00000057185 BB014433Q8C5R5 389 aa6.99□□□□□ -1.29
Pcdh1-201ENSMUST00000057185 Igkv8-24A0A140T8P5 121 aa6.98□□□□□ -1.29
Pcdh1-201ENSMUST00000057185 2010109I03RikQ9CQ11 111 aa6.98□□□□□ -1.29
Pcdh1-201ENSMUST00000057185 Mzt1Q8BUR9 78 aa6.98□□□□□ -1.29
Pcdh1-201ENSMUST00000057185 Defa21Q8C1P2 93 aa6.98□□□□□ -1.29
Pcdh1-201ENSMUST00000057185 Gm9887F6RFI0 207 aa6.98□□□□□ -1.29
Retrieved 100 of 22,080 RNA–protein pairs in 51.8 ms