RNA–Protein interactions for RNA: ENSMUST00000055353.8

Msx3-201, Transcript of Homeobox protein MSX-3, mousemouse

TSL 1 (best) BASIC

Gene Msx3, Length 2,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3-201ENSMUST00000055353 Gm6793B2RXM2 351 aa10.49□□□□□ -0.73
Msx3-201ENSMUST00000055353 Defa4P28311 92 aa10.49□□□□□ -0.73
Msx3-201ENSMUST00000055353 CenpwQ3URR0 86 aa10.49□□□□□ -0.73
Msx3-201ENSMUST00000055353 Gm815Q3UWS2 115 aa10.49□□□□□ -0.73
Msx3-201ENSMUST00000055353 Gm9747Q810H1 104 aa10.49□□□□□ -0.73
Msx3-201ENSMUST00000055353 4930415O20RikQ8CDT5 131 aa10.49□□□□□ -0.73
Msx3-201ENSMUST00000055353 BsnO88737 3942 aa10.49□□□□□ -0.73
Msx3-201ENSMUST00000055353 Trdv5A0A075B661 115 aa10.48□□□□□ -0.73
Msx3-201ENSMUST00000055353 Gm11020F6ZGD5 61 aa10.48□□□□□ -0.73
Msx3-201ENSMUST00000055353 Pdzd2E9Q1M1 2796 aa10.48□□□□□ -0.73
Msx3-201ENSMUST00000055353 Eif4ebp3Q80VV3 101 aa10.48□□□□□ -0.73
Msx3-201ENSMUST00000055353 Prss58Q8BW11 241 aa10.48□□□□□ -0.73
Msx3-201ENSMUST00000055353 Srsf12Q8C8K3 266 aa10.48□□□□□ -0.73
Msx3-201ENSMUST00000055353 Gm29423A0A087WRM1 55 aa10.47□□□□□ -0.73
Msx3-201ENSMUST00000055353 Atp5g3P56384 141 aa10.47□□□□□ -0.73
Msx3-201ENSMUST00000055353 Lgals4Q8K419 326 aa10.47□□□□□ -0.73
Msx3-201ENSMUST00000055353 P01786 117 aa10.47□□□□□ -0.73
Msx3-201ENSMUST00000055353 Gm7849D3YX03 116 aa10.46□□□□□ -0.73
Msx3-201ENSMUST00000055353 P01729 129 aa10.46□□□□□ -0.73
Msx3-201ENSMUST00000055353 Gm10542F6XDR3 90 aa10.46□□□□□ -0.74
Msx3-201ENSMUST00000055353 Gm3443F7CCV5 94 aa10.46□□□□□ -0.74
Msx3-201ENSMUST00000055353 P01738 130 aa10.45□□□□□ -0.74
Msx3-201ENSMUST00000055353 Smim10l1A0A087WNQ7 89 aa10.45□□□□□ -0.74
Msx3-201ENSMUST00000055353 Ighv1-11A0A0A6YWI9 117 aa10.45□□□□□ -0.74
Msx3-201ENSMUST00000055353 Pglyrp4Q0VB07 374 aa10.45□□□□□ -0.74
Msx3-201ENSMUST00000055353 Prp2P05143 317 aa10.44□□□□□ -0.74
Msx3-201ENSMUST00000055353 Hectd1Q69ZR2 2618 aaKnown RBP10.44□□□□□ -0.74
Msx3-201ENSMUST00000055353 Trav7-6A0A075B640 112 aa10.44□□□□□ -0.74
Msx3-201ENSMUST00000055353 Glrp1E9Q9S8 174 aa10.44□□□□□ -0.74
Msx3-201ENSMUST00000055353 Mapk1ip1lQ8BH93 242 aa10.43□□□□□ -0.74
Msx3-201ENSMUST00000055353 Usp24B1AY13 2617 aaKnown RBP10.43□□□□□ -0.74
Msx3-201ENSMUST00000055353 Trav13n-1A0A0G2JEU8 110 aa10.43□□□□□ -0.74
Msx3-201ENSMUST00000055353 Spink1P09036 80 aa10.43□□□□□ -0.74
Msx3-201ENSMUST00000055353 Fgfbp3Q1HCM0 245 aa10.43□□□□□ -0.74
Msx3-201ENSMUST00000055353 Cox17P56394 63 aa10.42□□□□□ -0.74
Msx3-201ENSMUST00000055353 Ccl21aP84444 133 aa10.42□□□□□ -0.74
Msx3-201ENSMUST00000055353 Ccl21bP86792 133 aa10.42□□□□□ -0.74
Msx3-201ENSMUST00000055353 Ccl21cP86793 133 aa10.42□□□□□ -0.74
Msx3-201ENSMUST00000055353 Pou2af1Q64693 256 aa10.42□□□□□ -0.74
Msx3-201ENSMUST00000055353 Hivep2Q3UHF7 2430 aa10.42□□□□□ -0.74
Msx3-201ENSMUST00000055353 Gm10322F7D7I4 111 aa10.41□□□□□ -0.74
Msx3-201ENSMUST00000055353 Gm9936Q8C864 160 aa10.41□□□□□ -0.74
Msx3-201ENSMUST00000055353 Wnk1P83741 2377 aa10.41□□□□□ -0.74
Msx3-201ENSMUST00000055353 4930432M17RikQ3V0W9 174 aa10.41□□□□□ -0.74
Msx3-201ENSMUST00000055353 Gm10300Q8C8P7 189 aa10.41□□□□□ -0.74
Msx3-201ENSMUST00000055353 Gm8439G3UWA7 96 aa10.4□□□□□ -0.74
Msx3-201ENSMUST00000055353 PrlhG3UWC3 86 aa10.4□□□□□ -0.74
Msx3-201ENSMUST00000055353 P01823 113 aa10.4□□□□□ -0.74
Msx3-201ENSMUST00000055353 Igkv4-79A0A075B5L8 119 aa10.39□□□□□ -0.75
Msx3-201ENSMUST00000055353 Prelid3aQ8VE85 172 aa10.39□□□□□ -0.75
Msx3-201ENSMUST00000055353 Rif1Q6PR54 2419 aaKnown RBP10.39□□□□□ -0.75
Msx3-201ENSMUST00000055353 Hspg2Q05793 3707 aaKnown RBP10.39□□□□□ -0.75
Msx3-201ENSMUST00000055353 Defa16P50714 93 aa10.38□□□□□ -0.75
Msx3-201ENSMUST00000055353 Gm19935A0A1B0GSF9 52 aa10.37□□□□□ -0.75
Msx3-201ENSMUST00000055353 Rnase1P00683 149 aa10.37□□□□□ -0.75
Msx3-201ENSMUST00000055353 Gm10767Q3TQP0 103 aa10.37□□□□□ -0.75
Msx3-201ENSMUST00000055353 A830031A19RikQ8BNT5 113 aa10.37□□□□□ -0.75
Msx3-201ENSMUST00000055353 Lypd5Q9D7Z7 256 aa10.37□□□□□ -0.75
Msx3-201ENSMUST00000055353 Tenm3Q9WTS6 2715 aa10.37□□□□□ -0.75
Msx3-201ENSMUST00000055353 Sostdc1Q9CQN4 206 aa10.37□□□□□ -0.75
Msx3-201ENSMUST00000055353 Col7a1Q63870 2944 aa10.36□□□□□ -0.75
Msx3-201ENSMUST00000055353 Defa1P11477 93 aa10.36□□□□□ -0.75
Msx3-201ENSMUST00000055353 H1fxQ80ZM5 188 aa10.36□□□□□ -0.75
Msx3-201ENSMUST00000055353 Myo9aQ8C170 2542 aa10.36□□□□□ -0.75
Msx3-201ENSMUST00000055353 Ly6hQ9WUC3 139 aa10.36□□□□□ -0.75
Msx3-201ENSMUST00000055353 Tmem258P61166 79 aa10.35□□□□□ -0.75
Msx3-201ENSMUST00000055353 SbsponQ3UPR9 264 aa10.35□□□□□ -0.75
Msx3-201ENSMUST00000055353 Foxc1Q61572 553 aa10.35□□□□□ -0.75
Msx3-201ENSMUST00000055353 Atp5g1Q9CR84 136 aa10.35□□□□□ -0.75
Msx3-201ENSMUST00000055353 Crlf1Q9JM58 425 aa10.35□□□□□ -0.75
Msx3-201ENSMUST00000055353 Ankrd17Q99NH0 2603 aaKnown RBP10.35□□□□□ -0.75
Msx3-201ENSMUST00000055353 Defa25Q5G864 92 aa10.34□□□□□ -0.75
Msx3-201ENSMUST00000055353 Ube2wQ8VDW4 151 aa10.34□□□□□ -0.75
Msx3-201ENSMUST00000055353 Q99M08 65 aa10.34□□□□□ -0.75
Msx3-201ENSMUST00000055353 Wdr38Q9D994 303 aa10.34□□□□□ -0.75
Msx3-201ENSMUST00000055353 FlnaQ8BTM8 2647 aaKnown RBP10.34□□□□□ -0.75
Msx3-201ENSMUST00000055353 Gm17472A0A075B683 117 aa10.34□□□□□ -0.75
Msx3-201ENSMUST00000055353 Znf740Q6NZQ6 180 aa10.34□□□□□ -0.75
Msx3-201ENSMUST00000055353 P01745 121 aa10.33□□□□□ -0.76
Msx3-201ENSMUST00000055353 SpinklQ8CEK3 90 aa10.33□□□□□ -0.76
Msx3-201ENSMUST00000055353 Nop10Q9CQS2 64 aa10.33□□□□□ -0.76
Msx3-201ENSMUST00000055353 Gm7257D3YX25 99 aa10.33□□□□□ -0.76
Msx3-201ENSMUST00000055353 Bean1Q9EQG5 255 aa10.33□□□□□ -0.76
Msx3-201ENSMUST00000055353 Timm17bQ9Z0V7 172 aa10.33□□□□□ -0.76
Msx3-201ENSMUST00000055353 Trav9d-3A0A075B695 113 aa10.32□□□□□ -0.76
Msx3-201ENSMUST00000055353 Gm7075D3Z497 112 aa10.32□□□□□ -0.76
Msx3-201ENSMUST00000055353 4930442H23RikQ9D5G7 103 aa10.32□□□□□ -0.76
Msx3-201ENSMUST00000055353 Tfpi2O35536 230 aa10.32□□□□□ -0.76
Msx3-201ENSMUST00000055353 Plac8l1Q08EJ0 177 aa10.32□□□□□ -0.76
Msx3-201ENSMUST00000055353 Defb42Q8BVB5 75 aa10.32□□□□□ -0.76
Msx3-201ENSMUST00000055353 Spry2Q9QXV8 315 aa10.32□□□□□ -0.76
Msx3-201ENSMUST00000055353 Ighv1-62-1A0A075B5U3 116 aa10.31□□□□□ -0.76
Msx3-201ENSMUST00000055353 Trav4-3A0A0B4J1K1 110 aa10.31□□□□□ -0.76
Msx3-201ENSMUST00000055353 Cep192E9Q4Y4 2514 aaKnown RBP10.31□□□□□ -0.76
Msx3-201ENSMUST00000055353 MtorQ9JLN9 2549 aa10.31□□□□□ -0.76
Msx3-201ENSMUST00000055353 Trav13-4-dv7A0A075B6C2 110 aa10.31□□□□□ -0.76
Msx3-201ENSMUST00000055353 Eif4ebp1Q60876 117 aa10.31□□□□□ -0.76
Msx3-201ENSMUST00000055353 Trav4d-3A0A075B625 110 aa10.3□□□□□ -0.76
Msx3-201ENSMUST00000055353 Gm28374F6SG70 93 aa10.3□□□□□ -0.76
Msx3-201ENSMUST00000055353 Sh2d1aO88890 126 aa10.3□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 49.4 ms