RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Cep192E9Q4Y4 2514 aaKnown RBP7.03□□□□□ -1.28
Ccdc40-202ENSMUST00000053440 CirbpP60824 172 aaKnown RBP7.03□□□□□ -1.28
Ccdc40-202ENSMUST00000053440 4930544G11RikQ9CR99 193 aa7.03□□□□□ -1.28
Ccdc40-202ENSMUST00000053440 4930442H23RikQ9D5G7 103 aa7.03□□□□□ -1.28
Ccdc40-202ENSMUST00000053440 Spry2Q9QXV8 315 aa7.03□□□□□ -1.28
Ccdc40-202ENSMUST00000053440 Notch2O35516 2470 aa7.03□□□□□ -1.28
Ccdc40-202ENSMUST00000053440 Gm10322F7D7I4 111 aa7.02□□□□□ -1.28
Ccdc40-202ENSMUST00000053440 Srsf12Q8C8K3 266 aa7.02□□□□□ -1.28
Ccdc40-202ENSMUST00000053440 Sostdc1Q9CQN4 206 aa7.02□□□□□ -1.29
Ccdc40-202ENSMUST00000053440 Gm5089A1L3C8 106 aa7.02□□□□□ -1.29
Ccdc40-202ENSMUST00000053440 Gm7257D3YX25 99 aa7.02□□□□□ -1.29
Ccdc40-202ENSMUST00000053440 Morn3Q8C5T4 241 aa7.02□□□□□ -1.29
Ccdc40-202ENSMUST00000053440 Xlr5cQ9JJR2 179 aa7.02□□□□□ -1.29
Ccdc40-202ENSMUST00000053440 Timm17bQ9Z0V7 172 aa7.02□□□□□ -1.29
Ccdc40-202ENSMUST00000053440 Usp9yF8VPU6 2556 aa7.02□□□□□ -1.29
Ccdc40-202ENSMUST00000053440 Trav9d-3A0A075B695 113 aa7.01□□□□□ -1.29
Ccdc40-202ENSMUST00000053440 Gm10300Q8C8P7 189 aa7.01□□□□□ -1.29
Ccdc40-202ENSMUST00000053440 Hivep3A2A884 2348 aa7.01□□□□□ -1.29
Ccdc40-202ENSMUST00000053440 Trav4d-3A0A075B625 110 aa7.01□□□□□ -1.29
Ccdc40-202ENSMUST00000053440 Trav9d-4A0A0G2JG37 103 aa7.01□□□□□ -1.29
Ccdc40-202ENSMUST00000053440 Gatd1Q8BFQ8 220 aa7.01□□□□□ -1.29
Ccdc40-202ENSMUST00000053440 Q99M08 65 aa7.01□□□□□ -1.29
Ccdc40-202ENSMUST00000053440 Zfp462B1AWL2 2495 aaKnown RBP7.01□□□□□ -1.29
Ccdc40-202ENSMUST00000053440 Trav4-3A0A0B4J1K1 110 aa7.01□□□□□ -1.29
Ccdc40-202ENSMUST00000053440 Gm8439G3UWA7 96 aa7.01□□□□□ -1.29
Ccdc40-202ENSMUST00000053440 Nop10Q9CQS2 64 aa7.01□□□□□ -1.29
Ccdc40-202ENSMUST00000053440 Gm7075D3Z497 112 aa7□□□□□ -1.29
Ccdc40-202ENSMUST00000053440 Rpl36aP83882 106 aaKnown RBP7□□□□□ -1.29
Ccdc40-202ENSMUST00000053440 Ccl21aP84444 133 aa7□□□□□ -1.29
Ccdc40-202ENSMUST00000053440 Ccl21bP86792 133 aa7□□□□□ -1.29
Ccdc40-202ENSMUST00000053440 Ccl21cP86793 133 aa7□□□□□ -1.29
Ccdc40-202ENSMUST00000053440 Eif4ebp1Q60876 117 aa7□□□□□ -1.29
Ccdc40-202ENSMUST00000053440 CdsnQ7TPC1 561 aa7□□□□□ -1.29
Ccdc40-202ENSMUST00000053440 Tenm3Q9WTS6 2715 aa7□□□□□ -1.29
Ccdc40-202ENSMUST00000053440 Ighv1-62-1A0A075B5U3 116 aa7□□□□□ -1.29
Ccdc40-202ENSMUST00000053440 Trav13-4-dv7A0A075B6C2 110 aa7□□□□□ -1.29
Ccdc40-202ENSMUST00000053440 Rnase1P00683 149 aa7□□□□□ -1.29
Ccdc40-202ENSMUST00000053440 P01745 121 aa7□□□□□ -1.29
Ccdc40-202ENSMUST00000053440 Ndufa3Q9CQ91 84 aa7□□□□□ -1.29
Ccdc40-202ENSMUST00000053440 1700010B08RikQ9DAI7 102 aa7□□□□□ -1.29
Ccdc40-202ENSMUST00000053440 TrrapQ80YV3 2565 aaKnown RBP7□□□□□ -1.29
Ccdc40-202ENSMUST00000053440 Crlf1Q9JM58 425 aa7□□□□□ -1.29
Ccdc40-202ENSMUST00000053440 NipblQ6KCD5 2798 aaKnown RBP6.99□□□□□ -1.29
Ccdc40-202ENSMUST00000053440 Gm17472A0A075B683 117 aa6.99□□□□□ -1.29
Ccdc40-202ENSMUST00000053440 Gm11565A2A4M7 156 aa6.99□□□□□ -1.29
Ccdc40-202ENSMUST00000053440 Pglyrp4Q0VB07 374 aa6.99□□□□□ -1.29
Ccdc40-202ENSMUST00000053440 C2cd3Q52KB6 2323 aa6.99□□□□□ -1.29
Ccdc40-202ENSMUST00000053440 Epg5Q80TA9 2572 aa6.99□□□□□ -1.29
Ccdc40-202ENSMUST00000053440 Foxc1Q61572 553 aa6.99□□□□□ -1.29
Ccdc40-202ENSMUST00000053440 ColqO35348 457 aa6.98□□□□□ -1.29
Ccdc40-202ENSMUST00000053440 Sh2d1aO88890 126 aa6.98□□□□□ -1.29
Ccdc40-202ENSMUST00000053440 Pfn2Q9JJV2 140 aa6.98□□□□□ -1.29
Ccdc40-202ENSMUST00000053440 1700011M02RikB1AX35 88 aa6.98□□□□□ -1.29
Ccdc40-202ENSMUST00000053440 Lst1O08843 95 aa6.98□□□□□ -1.29
Ccdc40-202ENSMUST00000053440 Rpl35aO55142 110 aa6.98□□□□□ -1.29
Ccdc40-202ENSMUST00000053440 TeppQ6IMH0 216 aa6.98□□□□□ -1.29
Ccdc40-202ENSMUST00000053440 SelenowP63300 88 aa6.98□□□□□ -1.29
Ccdc40-202ENSMUST00000053440 Plac8l1Q08EJ0 177 aa6.98□□□□□ -1.29
Ccdc40-202ENSMUST00000053440 Unc79Q0KK59 2596 aa6.97□□□□□ -1.29
Ccdc40-202ENSMUST00000053440 BsnO88737 3942 aa6.97□□□□□ -1.29
Ccdc40-202ENSMUST00000053440 Defa1P11477 93 aa6.97□□□□□ -1.29
Ccdc40-202ENSMUST00000053440 Lypd5Q9D7Z7 256 aa6.97□□□□□ -1.29
Ccdc40-202ENSMUST00000053440 Ighv1-49A0A0A6YWX2 117 aa6.97□□□□□ -1.29
Ccdc40-202ENSMUST00000053440 Cox7a1P56392 80 aa6.97□□□□□ -1.29
Ccdc40-202ENSMUST00000053440 Cdc42se2Q8BGH7 84 aa6.97□□□□□ -1.29
Ccdc40-202ENSMUST00000053440 Gm9922Q8C3P1 144 aa6.97□□□□□ -1.29
Ccdc40-202ENSMUST00000053440 Tfpi2O35536 230 aa6.96□□□□□ -1.29
Ccdc40-202ENSMUST00000053440 Defb42Q8BVB5 75 aa6.96□□□□□ -1.29
Ccdc40-202ENSMUST00000053440 Trav3-4A0A075B654 114 aa6.96□□□□□ -1.3
Ccdc40-202ENSMUST00000053440 Defb26Q30KN7 186 aa6.96□□□□□ -1.3
Ccdc40-202ENSMUST00000053440 Bles03Q8VD62 251 aa6.96□□□□□ -1.3
Ccdc40-202ENSMUST00000053440 Fxyd5P97808 178 aa6.96□□□□□ -1.3
Ccdc40-202ENSMUST00000053440 Setd2E9Q5F9 2537 aa6.95□□□□□ -1.3
Ccdc40-202ENSMUST00000053440 Gm10647E9Q8X0 124 aa6.95□□□□□ -1.3
Ccdc40-202ENSMUST00000053440 Trav11A0A0B4J1J9 114 aa6.95□□□□□ -1.3
Ccdc40-202ENSMUST00000053440 Gm26661M0QWV4 156 aa6.95□□□□□ -1.3
Ccdc40-202ENSMUST00000053440 MalO09198 153 aa6.95□□□□□ -1.3
Ccdc40-202ENSMUST00000053440 Ighv1-61P01749 117 aa6.95□□□□□ -1.3
Ccdc40-202ENSMUST00000053440 Tmem213Q08EA8 116 aa6.95□□□□□ -1.3
Ccdc40-202ENSMUST00000053440 PemtQ61907 199 aa6.94□□□□□ -1.3
Ccdc40-202ENSMUST00000053440 Defb29Q8BGW9 78 aa6.94□□□□□ -1.3
Ccdc40-202ENSMUST00000053440 Akap13E9Q394 2776 aa6.94□□□□□ -1.3
Ccdc40-202ENSMUST00000053440 Trav14d-3-dv8A0A075B619 120 aa6.94□□□□□ -1.3
Ccdc40-202ENSMUST00000053440 B230359F08RikA0A0B4J1K3 109 aa6.94□□□□□ -1.3
Ccdc40-202ENSMUST00000053440 Igkv1-35A0A0G2JDE5 120 aa6.94□□□□□ -1.3
Ccdc40-202ENSMUST00000053440 Cd164l2Q9D6W7 172 aa6.94□□□□□ -1.3
Ccdc40-202ENSMUST00000053440 Esm1Q9QYY7 184 aa6.94□□□□□ -1.3
Ccdc40-202ENSMUST00000053440 Tomm7Q9D173 55 aa6.93□□□□□ -1.3
Ccdc40-202ENSMUST00000053440 Trav13d-4A0A0G2JFX3 110 aa6.93□□□□□ -1.3
Ccdc40-202ENSMUST00000053440 PkigO70139 76 aa6.93□□□□□ -1.3
Ccdc40-202ENSMUST00000053440 Gm904Q3V2L5 102 aa6.93□□□□□ -1.3
Ccdc40-202ENSMUST00000053440 Ndufa12Q7TMF3 145 aaKnown RBP6.93□□□□□ -1.3
Ccdc40-202ENSMUST00000053440 P01755 137 aa6.92□□□□□ -1.3
Ccdc40-202ENSMUST00000053440 Atp5eP56382 52 aa6.92□□□□□ -1.3
Ccdc40-202ENSMUST00000053440 Rnf152Q8BG47 203 aa6.92□□□□□ -1.3
Ccdc40-202ENSMUST00000053440 Hspg2Q05793 3707 aaKnown RBP6.92□□□□□ -1.3
Ccdc40-202ENSMUST00000053440 4930546C10RikE9Q4Y3 121 aa6.92□□□□□ -1.3
Ccdc40-202ENSMUST00000053440 CrygaP04345 174 aa6.92□□□□□ -1.3
Ccdc40-202ENSMUST00000053440 Ppp1r32Q148A4 427 aa6.92□□□□□ -1.3
Ccdc40-202ENSMUST00000053440 Prh1P05142 261 aa6.91□□□□□ -1.3
Retrieved 100 of 22,080 RNA–protein pairs in 34.1 ms