RNA–Protein interactions for RNA: ENSMUST00000039021.10

Ssx2ip-201, Transcript of Afadin- and alpha-actinin-binding protein, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssx2ip, Length 3,410 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx2ip-201ENSMUST00000039021 Ighv2-6-8A0A0A6YWY9 116 aa13.34□□□□□ -0.27
Ssx2ip-201ENSMUST00000039021 Ly6gP35461 111 aa13.34□□□□□ -0.27
Ssx2ip-201ENSMUST00000039021 Nop10Q9CQS2 64 aa13.34□□□□□ -0.27
Ssx2ip-201ENSMUST00000039021 Wdr38Q9D994 303 aa13.34□□□□□ -0.27
Ssx2ip-201ENSMUST00000039021 Phpt1Q9DAK9 124 aa13.34□□□□□ -0.27
Ssx2ip-201ENSMUST00000039021 Znf580Q9DB38 172 aa13.34□□□□□ -0.27
Ssx2ip-201ENSMUST00000039021 Pfn2Q9JJV2 140 aa13.34□□□□□ -0.27
Ssx2ip-201ENSMUST00000039021 Ly6hQ9WUC3 139 aa13.34□□□□□ -0.27
Ssx2ip-201ENSMUST00000039021 Trav9d-4A0A0G2JG37 103 aa13.34□□□□□ -0.27
Ssx2ip-201ENSMUST00000039021 CdsnQ7TPC1 561 aa13.34□□□□□ -0.27
Ssx2ip-201ENSMUST00000039021 Igkv4-79A0A075B5L8 119 aa13.33□□□□□ -0.27
Ssx2ip-201ENSMUST00000039021 Trav13-4-dv7A0A075B6C2 110 aa13.33□□□□□ -0.27
Ssx2ip-201ENSMUST00000039021 Ighv1-11A0A0A6YWI9 117 aa13.33□□□□□ -0.27
Ssx2ip-201ENSMUST00000039021 H1fxQ80ZM5 188 aa13.33□□□□□ -0.28
Ssx2ip-201ENSMUST00000039021 Shisa2Q8QZV2 295 aa13.33□□□□□ -0.28
Ssx2ip-201ENSMUST00000039021 Defa1P11477 93 aa13.33□□□□□ -0.28
Ssx2ip-201ENSMUST00000039021 Ccl21aP84444 133 aa13.33□□□□□ -0.28
Ssx2ip-201ENSMUST00000039021 Ccl21bP86792 133 aa13.33□□□□□ -0.28
Ssx2ip-201ENSMUST00000039021 Ccl21cP86793 133 aa13.33□□□□□ -0.28
Ssx2ip-201ENSMUST00000039021 Gm7075D3Z497 112 aa13.32□□□□□ -0.28
Ssx2ip-201ENSMUST00000039021 Gm3443F7CCV5 94 aa13.32□□□□□ -0.28
Ssx2ip-201ENSMUST00000039021 Prh1P05142 261 aa13.32□□□□□ -0.28
Ssx2ip-201ENSMUST00000039021 Psmb8P28063 276 aa13.32□□□□□ -0.28
Ssx2ip-201ENSMUST00000039021 Gm6793B2RXM2 351 aa13.31□□□□□ -0.28
Ssx2ip-201ENSMUST00000039021 Crlf1Q9JM58 425 aa13.31□□□□□ -0.28
Ssx2ip-201ENSMUST00000039021 4930432M17RikQ3V0W9 174 aa13.31□□□□□ -0.28
Ssx2ip-201ENSMUST00000039021 Gm9936Q8C864 160 aa13.3□□□□□ -0.28
Ssx2ip-201ENSMUST00000039021 March3Q8BRX9 218 aa13.3□□□□□ -0.28
Ssx2ip-201ENSMUST00000039021 Ndufa3Q9CQ91 84 aa13.3□□□□□ -0.28
Ssx2ip-201ENSMUST00000039021 Prr13Q9CQJ5 137 aa13.3□□□□□ -0.28
Ssx2ip-201ENSMUST00000039021 CirbpP60824 172 aaKnown RBP13.29□□□□□ -0.28
Ssx2ip-201ENSMUST00000039021 Cox6cQ9CPQ1 76 aa13.29□□□□□ -0.28
Ssx2ip-201ENSMUST00000039021 Xlr5cQ9JJR2 179 aa13.29□□□□□ -0.28
Ssx2ip-201ENSMUST00000039021 CenpwQ3URR0 86 aa13.29□□□□□ -0.28
Ssx2ip-201ENSMUST00000039021 Cox7a1P56392 80 aa13.27□□□□□ -0.28
Ssx2ip-201ENSMUST00000039021 Pglyrp4Q0VB07 374 aa13.27□□□□□ -0.28
Ssx2ip-201ENSMUST00000039021 Ighv1-49A0A0A6YWX2 117 aa13.27□□□□□ -0.29
Ssx2ip-201ENSMUST00000039021 P01745 121 aa13.26□□□□□ -0.29
Ssx2ip-201ENSMUST00000039021 Rpl36aP83882 106 aaKnown RBP13.26□□□□□ -0.29
Ssx2ip-201ENSMUST00000039021 Rnase1P00683 149 aa13.26□□□□□ -0.29
Ssx2ip-201ENSMUST00000039021 Sostdc1Q9CQN4 206 aa13.26□□□□□ -0.29
Ssx2ip-201ENSMUST00000039021 B230359F08RikA0A0B4J1K3 109 aa13.25□□□□□ -0.29
Ssx2ip-201ENSMUST00000039021 Defb29Q8BGW9 78 aa13.25□□□□□ -0.29
Ssx2ip-201ENSMUST00000039021 Tomm7Q9D173 55 aa13.25□□□□□ -0.29
Ssx2ip-201ENSMUST00000039021 Cox17P56394 63 aa13.25□□□□□ -0.29
Ssx2ip-201ENSMUST00000039021 Trav3-4A0A075B654 114 aa13.24□□□□□ -0.29
Ssx2ip-201ENSMUST00000039021 Gm3250E9Q1M3 230 aa13.24□□□□□ -0.29
Ssx2ip-201ENSMUST00000039021 SelenowP63300 88 aa13.23□□□□□ -0.29
Ssx2ip-201ENSMUST00000039021 Smrp1Q2MH31 260 aa13.23□□□□□ -0.29
Ssx2ip-201ENSMUST00000039021 Fgfbp3Q1HCM0 245 aa13.22□□□□□ -0.29
Ssx2ip-201ENSMUST00000039021 Igkv1-35A0A0G2JDE5 120 aa13.22□□□□□ -0.29
Ssx2ip-201ENSMUST00000039021 Ighv1-62-1A0A075B5U3 116 aa13.22□□□□□ -0.29
Ssx2ip-201ENSMUST00000039021 Gm8439G3UWA7 96 aa13.21□□□□□ -0.29
Ssx2ip-201ENSMUST00000039021 Morn3Q8C5T4 241 aa13.21□□□□□ -0.29
Ssx2ip-201ENSMUST00000039021 Q99M08 65 aa13.21□□□□□ -0.29
Ssx2ip-201ENSMUST00000039021 MrapQ9D159 127 aa13.21□□□□□ -0.29
Ssx2ip-201ENSMUST00000039021 Lst1O08843 95 aa13.2□□□□□ -0.3
Ssx2ip-201ENSMUST00000039021 ColqO35348 457 aa13.2□□□□□ -0.3
Ssx2ip-201ENSMUST00000039021 Foxc1Q61572 553 aa13.2□□□□□ -0.3
Ssx2ip-201ENSMUST00000039021 Srsf12Q8C8K3 266 aa13.2□□□□□ -0.3
Ssx2ip-201ENSMUST00000039021 Trav13d-4A0A0G2JFX3 110 aa13.2□□□□□ -0.3
Ssx2ip-201ENSMUST00000039021 Col7a1Q63870 2944 aa13.2□□□□□ -0.3
Ssx2ip-201ENSMUST00000039021 1700011M02RikB1AX35 88 aa13.2□□□□□ -0.3
Ssx2ip-201ENSMUST00000039021 Defa16P50714 93 aa13.2□□□□□ -0.3
Ssx2ip-201ENSMUST00000039021 Gm10647E9Q8X0 124 aa13.19□□□□□ -0.3
Ssx2ip-201ENSMUST00000039021 Hspg2Q05793 3707 aaKnown RBP13.18□□□□□ -0.3
Ssx2ip-201ENSMUST00000039021 Trav11A0A0B4J1J9 114 aa13.18□□□□□ -0.3
Ssx2ip-201ENSMUST00000039021 TeppQ6IMH0 216 aa13.18□□□□□ -0.3
Ssx2ip-201ENSMUST00000039021 BsnO88737 3942 aa13.17□□□□□ -0.3
Ssx2ip-201ENSMUST00000039021 Plac8l1Q08EJ0 177 aa13.16□□□□□ -0.3
Ssx2ip-201ENSMUST00000039021 Eif4ebp1Q60876 117 aa13.16□□□□□ -0.3
Ssx2ip-201ENSMUST00000039021 1700010B08RikQ9DAI7 102 aa13.16□□□□□ -0.3
Ssx2ip-201ENSMUST00000039021 PkigO70139 76 aa13.15□□□□□ -0.3
Ssx2ip-201ENSMUST00000039021 Defb42Q8BVB5 75 aa13.15□□□□□ -0.3
Ssx2ip-201ENSMUST00000039021 4930442H23RikQ9D5G7 103 aa13.15□□□□□ -0.3
Ssx2ip-201ENSMUST00000039021 Trav13-1A0A075B644 110 aa13.15□□□□□ -0.3
Ssx2ip-201ENSMUST00000039021 Gm9922Q8C3P1 144 aa13.15□□□□□ -0.3
Ssx2ip-201ENSMUST00000039021 P01755 137 aa13.14□□□□□ -0.31
Ssx2ip-201ENSMUST00000039021 D130052B06RikQ3UW13 202 aa13.14□□□□□ -0.31
Ssx2ip-201ENSMUST00000039021 Cdc42se2Q8BGH7 84 aa13.14□□□□□ -0.31
Ssx2ip-201ENSMUST00000039021 Ndufa12Q7TMF3 145 aaKnown RBP13.14□□□□□ -0.31
Ssx2ip-201ENSMUST00000039021 Gatd1Q8BFQ8 220 aa13.14□□□□□ -0.31
Ssx2ip-201ENSMUST00000039021 Lypd5Q9D7Z7 256 aa13.14□□□□□ -0.31
Ssx2ip-201ENSMUST00000039021 Tex15F8VPN2 2785 aa13.13□□□□□ -0.31
Ssx2ip-201ENSMUST00000039021 MalO09198 153 aa13.13□□□□□ -0.31
Ssx2ip-201ENSMUST00000039021 Cd164l2Q9D6W7 172 aa13.13□□□□□ -0.31
Ssx2ip-201ENSMUST00000039021 Mast4Q811L6 2618 aa13.13□□□□□ -0.31
Ssx2ip-201ENSMUST00000039021 Trav14d-3-dv8A0A075B619 120 aa13.13□□□□□ -0.31
Ssx2ip-201ENSMUST00000039021 Trav13n-2A0A0G2JF93 110 aa13.13□□□□□ -0.31
Ssx2ip-201ENSMUST00000039021 Esm1Q9QYY7 184 aa13.13□□□□□ -0.31
Ssx2ip-201ENSMUST00000039021 Timm17bQ9Z0V7 172 aa13.12□□□□□ -0.31
Ssx2ip-201ENSMUST00000039021 PemtQ61907 199 aa13.12□□□□□ -0.31
Ssx2ip-201ENSMUST00000039021 Trav4d-3A0A075B625 110 aa13.11□□□□□ -0.31
Ssx2ip-201ENSMUST00000039021 Gm17472A0A075B683 117 aa13.11□□□□□ -0.31
Ssx2ip-201ENSMUST00000039021 Defa2P28309 93 aa13.11□□□□□ -0.31
Ssx2ip-201ENSMUST00000039021 Tfpi2O35536 230 aa13.1□□□□□ -0.31
Ssx2ip-201ENSMUST00000039021 Trav4-3A0A0B4J1K1 110 aa13.1□□□□□ -0.31
Ssx2ip-201ENSMUST00000039021 Defa20Q45VN2 95 aa13.1□□□□□ -0.31
Ssx2ip-201ENSMUST00000039021 Dand5Q76LW6 185 aa13.09□□□□□ -0.31
Ssx2ip-201ENSMUST00000039021 Defb2P82020 71 aa13.08□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 49.5 ms