RNA–Protein interactions for RNA: ENSMUST00000022225.11

Trim23-201, Transcript of E3 ubiquitin-protein ligase TRIM23, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim23, Length 3,416 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23-201ENSMUST00000022225 Muc4Q8JZM8 3443 aa8.84□□□□□ -0.99
Trim23-201ENSMUST00000022225 Brk1Q91VR8 75 aa8.84□□□□□ -0.99
Trim23-201ENSMUST00000022225 Med13lQ6JPI3 2207 aa8.83□□□□□ -1
Trim23-201ENSMUST00000022225 Armcx4E9PWM3 2356 aa8.83□□□□□ -1
Trim23-201ENSMUST00000022225 Ifitm6A0A1B0GS75 124 aa8.83□□□□□ -1
Trim23-201ENSMUST00000022225 Igkv4-68A0A0B4J1I7 117 aa8.83□□□□□ -1
Trim23-201ENSMUST00000022225 Igkv4-79A0A075B5L8 119 aa8.82□□□□□ -1
Trim23-201ENSMUST00000022225 Ighv1-56A0A0A6YXG2 117 aa8.82□□□□□ -1
Trim23-201ENSMUST00000022225 Gm16381A0A1Y7VKT9 73 aa8.82□□□□□ -1
Trim23-201ENSMUST00000022225 Defb29Q8BGW9 78 aa8.82□□□□□ -1
Trim23-201ENSMUST00000022225 4930544G11RikQ9CR99 193 aa8.82□□□□□ -1
Trim23-201ENSMUST00000022225 Gm10647E9Q8X0 124 aa8.82□□□□□ -1
Trim23-201ENSMUST00000022225 Trav9d-4A0A0G2JG37 103 aa8.82□□□□□ -1
Trim23-201ENSMUST00000022225 1810032O08RikE9PZV8 113 aa8.82□□□□□ -1
Trim23-201ENSMUST00000022225 Defa23Q5G866 93 aa8.82□□□□□ -1
Trim23-201ENSMUST00000022225 Spink12Q9D256 87 aa8.82□□□□□ -1
Trim23-201ENSMUST00000022225 Usmg5Q78IK2 58 aa8.81□□□□□ -1
Trim23-201ENSMUST00000022225 Ighv2-9-1A0A075B697 116 aa8.81□□□□□ -1
Trim23-201ENSMUST00000022225 Gm7849D3YX03 116 aa8.81□□□□□ -1
Trim23-201ENSMUST00000022225 Ndufa12Q7TMF3 145 aaKnown RBP8.81□□□□□ -1
Trim23-201ENSMUST00000022225 Lmo4P61969 165 aa8.8□□□□□ -1
Trim23-201ENSMUST00000022225 Mrpl55Q9CZ83 127 aa8.8□□□□□ -1
Trim23-201ENSMUST00000022225 Synj2bpQ9D6K5 145 aa8.8□□□□□ -1
Trim23-201ENSMUST00000022225 Gm10553J3QPF1 123 aa8.8□□□□□ -1
Trim23-201ENSMUST00000022225 Q8R092 253 aa8.8□□□□□ -1
Trim23-201ENSMUST00000022225 Sprr3O09116 238 aa8.8□□□□□ -1
Trim23-201ENSMUST00000022225 Tfpi2O35536 230 aa8.8□□□□□ -1
Trim23-201ENSMUST00000022225 BlcapP62951 87 aa8.8□□□□□ -1
Trim23-201ENSMUST00000022225 Ighv2-7A0A075B5Q8 116 aa8.79□□□□□ -1
Trim23-201ENSMUST00000022225 Trav9-2A0A075B647 113 aa8.79□□□□□ -1
Trim23-201ENSMUST00000022225 Trav9-4A0A0B4J1K2 113 aa8.79□□□□□ -1
Trim23-201ENSMUST00000022225 Gm9513B3GLJ6 99 aa8.79□□□□□ -1
Trim23-201ENSMUST00000022225 Col6a4A2AX52 2309 aa8.79□□□□□ -1
Trim23-201ENSMUST00000022225 Gm21994F6T2D2 329 aa8.79□□□□□ -1
Trim23-201ENSMUST00000022225 Cela2aP05208 271 aa8.79□□□□□ -1
Trim23-201ENSMUST00000022225 Vpreb1P13372 142 aa8.79□□□□□ -1
Trim23-201ENSMUST00000022225 Rnf152Q8BG47 203 aa8.79□□□□□ -1
Trim23-201ENSMUST00000022225 E130208F15RikQ3UPV3 143 aa8.79□□□□□ -1
Trim23-201ENSMUST00000022225 Lama5Q61001 3718 aa8.78□□□□□ -1
Trim23-201ENSMUST00000022225 Fhl2O70433 279 aa8.78□□□□□ -1
Trim23-201ENSMUST00000022225 Fam19a1Q7TPG8 133 aa8.78□□□□□ -1
Trim23-201ENSMUST00000022225 Pgpep1lQ9CWB5 130 aa8.78□□□□□ -1
Trim23-201ENSMUST00000022225 LrbaQ9ESE1 2856 aa8.78□□□□□ -1
Trim23-201ENSMUST00000022225 Fbn2Q61555 2907 aa8.77□□□□□ -1.01
Trim23-201ENSMUST00000022225 GfyJ3KML8 504 aa8.77□□□□□ -1.01
Trim23-201ENSMUST00000022225 CnbpP53996 178 aaKnown RBP8.77□□□□□ -1.01
Trim23-201ENSMUST00000022225 Gm10308Q9CVR5 141 aa8.77□□□□□ -1.01
Trim23-201ENSMUST00000022225 Adgrg4B7ZCC9 3073 aa8.76□□□□□ -1.01
Trim23-201ENSMUST00000022225 Gm10226O88253 85 aa8.76□□□□□ -1.01
Trim23-201ENSMUST00000022225 Serp1Q9Z1W5 66 aa8.76□□□□□ -1.01
Trim23-201ENSMUST00000022225 Ash1lQ99MY8 2958 aa8.76□□□□□ -1.01
Trim23-201ENSMUST00000022225 H2al1bA0A087WP11 105 aa8.76□□□□□ -1.01
Trim23-201ENSMUST00000022225 H2al1kJ3QP08 105 aa8.76□□□□□ -1.01
Trim23-201ENSMUST00000022225 H2al1eQ810S6 105 aa8.76□□□□□ -1.01
Trim23-201ENSMUST00000022225 B230307C23RikQ8BLB2 64 aa8.76□□□□□ -1.01
Trim23-201ENSMUST00000022225 H2al1mQ9DAD9 105 aa8.76□□□□□ -1.01
Trim23-201ENSMUST00000022225 Rpl36aP83882 106 aaKnown RBP8.76□□□□□ -1.01
Trim23-201ENSMUST00000022225 Q9DAA7 145 aa8.76□□□□□ -1.01
Trim23-201ENSMUST00000022225 Pfn2Q9JJV2 140 aa8.76□□□□□ -1.01
Trim23-201ENSMUST00000022225 Piezo1E2JF22 2547 aa8.75□□□□□ -1.01
Trim23-201ENSMUST00000022225 Fam229bQ8CF36 80 aa8.75□□□□□ -1.01
Trim23-201ENSMUST00000022225 EnhoQ8K1D8 76 aa8.75□□□□□ -1.01
Trim23-201ENSMUST00000022225 SnurfQ9WU12 71 aa8.75□□□□□ -1.01
Trim23-201ENSMUST00000022225 Svep1A2AVA0 3567 aa8.75□□□□□ -1.01
Trim23-201ENSMUST00000022225 P01745 121 aa8.75□□□□□ -1.01
Trim23-201ENSMUST00000022225 Cdc42se2Q8BGH7 84 aa8.75□□□□□ -1.01
Trim23-201ENSMUST00000022225 Igkv8-21A0A140T8P7 120 aa8.74□□□□□ -1.01
Trim23-201ENSMUST00000022225 4930535I16RikQ9CUI2 172 aa8.74□□□□□ -1.01
Trim23-201ENSMUST00000022225 Defb50Q6TU36 73 aa8.74□□□□□ -1.01
Trim23-201ENSMUST00000022225 Plac8l1Q08EJ0 177 aa8.74□□□□□ -1.01
Trim23-201ENSMUST00000022225 Dph3Q8K0W9 82 aa8.74□□□□□ -1.01
Trim23-201ENSMUST00000022225 Tln1P26039 2541 aaKnown RBP8.74□□□□□ -1.01
Trim23-201ENSMUST00000022225 Igkv1-99F6XWB2 120 aa8.73□□□□□ -1.01
Trim23-201ENSMUST00000022225 Ighv5-8A0A075B676 92 aa8.73□□□□□ -1.01
Trim23-201ENSMUST00000022225 Trav13-4-dv7A0A075B6C2 110 aa8.72□□□□□ -1.01
Trim23-201ENSMUST00000022225 Trav9n-2A0A0G2JDP3 113 aa8.72□□□□□ -1.01
Trim23-201ENSMUST00000022225 Abca4O35600 2310 aa8.71□□□□□ -1.01
Trim23-201ENSMUST00000022225 Gm10845Q3UNY9 185 aa8.71□□□□□ -1.01
Trim23-201ENSMUST00000022225 Gm37389A0A0A6YW05 95 aa8.71□□□□□ -1.02
Trim23-201ENSMUST00000022225 Trav13n-2A0A0G2JF93 110 aa8.71□□□□□ -1.02
Trim23-201ENSMUST00000022225 Ppp1r32Q148A4 427 aa8.71□□□□□ -1.02
Trim23-201ENSMUST00000022225 Sptan1P16546 2472 aaKnown RBP8.71□□□□□ -1.02
Trim23-201ENSMUST00000022225 Defa-rs2P17534 91 aa8.7□□□□□ -1.02
Trim23-201ENSMUST00000022225 Gm5142Q8C5X9 133 aa8.7□□□□□ -1.02
Trim23-201ENSMUST00000022225 P01755 137 aa8.7□□□□□ -1.02
Trim23-201ENSMUST00000022225 Gm815Q3UWS2 115 aa8.7□□□□□ -1.02
Trim23-201ENSMUST00000022225 A930009A15RikG3UYI6 118 aa8.69□□□□□ -1.02
Trim23-201ENSMUST00000022225 CrygaP04345 174 aa8.69□□□□□ -1.02
Trim23-201ENSMUST00000022225 Ormdl1Q921I0 153 aa8.69□□□□□ -1.02
Trim23-201ENSMUST00000022225 Crlf1Q9JM58 425 aa8.69□□□□□ -1.02
Trim23-201ENSMUST00000022225 Rpl39lQ9CQD0 51 aa8.69□□□□□ -1.02
Trim23-201ENSMUST00000022225 Ighv10-3A0A075B5T6 119 aa8.68□□□□□ -1.02
Trim23-201ENSMUST00000022225 BikO70337 150 aa8.68□□□□□ -1.02
Trim23-201ENSMUST00000022225 Zfand2aQ9JII7 171 aa8.68□□□□□ -1.02
Trim23-201ENSMUST00000022225 P01738 130 aa8.68□□□□□ -1.02
Trim23-201ENSMUST00000022225 Prp2P05143 317 aa8.68□□□□□ -1.02
Trim23-201ENSMUST00000022225 Spink1P09036 80 aa8.68□□□□□ -1.02
Trim23-201ENSMUST00000022225 Ighv1-59A0A0A6YXE0 117 aa8.68□□□□□ -1.02
Trim23-201ENSMUST00000022225 B230359F08RikA0A0B4J1K3 109 aa8.68□□□□□ -1.02
Trim23-201ENSMUST00000022225 Rpl35aO55142 110 aa8.68□□□□□ -1.02
Retrieved 100 of 22,080 RNA–protein pairs in 66.5 ms