RNA–Protein interactions for RNA: ENSMUST00000015981.11

Sqstm1-201, Transcript of Sequestosome-1, mousemouse

TSL 1 (best) BASIC

Gene Sqstm1, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-201ENSMUST00000015981 Rpl28P41105 137 aaKnown RBP12.73□□□□□ -0.37
Sqstm1-201ENSMUST00000015981 Acyp1P56376 99 aa12.73□□□□□ -0.37
Sqstm1-201ENSMUST00000015981 Rpl18aP62717 176 aaKnown RBP12.73□□□□□ -0.37
Sqstm1-201ENSMUST00000015981 Igkv1-35A0A0G2JDE5 120 aa12.71□□□□□ -0.37
Sqstm1-201ENSMUST00000015981 Trav9n-2A0A0G2JDP3 113 aa12.71□□□□□ -0.37
Sqstm1-201ENSMUST00000015981 Trav9d-4A0A0G2JG37 103 aa12.71□□□□□ -0.37
Sqstm1-201ENSMUST00000015981 Rps28P62858 69 aaKnown RBP12.71□□□□□ -0.37
Sqstm1-201ENSMUST00000015981 A930009A15RikG3UYI6 118 aa12.7□□□□□ -0.38
Sqstm1-201ENSMUST00000015981 Ighv8-11A0A075B5X4 119 aa12.69□□□□□ -0.38
Sqstm1-201ENSMUST00000015981 Gm815Q3UWS2 115 aa12.69□□□□□ -0.38
Sqstm1-201ENSMUST00000015981 4930544G11RikQ9CR99 193 aa12.69□□□□□ -0.38
Sqstm1-201ENSMUST00000015981 Igkv6-13A0A0G2JGY3 119 aa12.68□□□□□ -0.38
Sqstm1-201ENSMUST00000015981 Defa7P50705 93 aa12.68□□□□□ -0.38
Sqstm1-201ENSMUST00000015981 Pip4p1Q3TWL2 284 aa12.68□□□□□ -0.38
Sqstm1-201ENSMUST00000015981 Fhl2O70433 279 aa12.68□□□□□ -0.38
Sqstm1-201ENSMUST00000015981 Hbb-b2P02089 147 aa12.68□□□□□ -0.38
Sqstm1-201ENSMUST00000015981 Reg3gO09049 174 aa12.67□□□□□ -0.38
Sqstm1-201ENSMUST00000015981 P01738 130 aa12.67□□□□□ -0.38
Sqstm1-201ENSMUST00000015981 Ndufa12Q7TMF3 145 aaKnown RBP12.67□□□□□ -0.38
Sqstm1-201ENSMUST00000015981 Rnf152Q8BG47 203 aa12.67□□□□□ -0.38
Sqstm1-201ENSMUST00000015981 Defb29Q8BGW9 78 aa12.67□□□□□ -0.38
Sqstm1-201ENSMUST00000015981 Akap6E9Q9K8 2307 aa12.67□□□□□ -0.38
Sqstm1-201ENSMUST00000015981 Tfpi2O35536 230 aa12.67□□□□□ -0.38
Sqstm1-201ENSMUST00000015981 Tm2d2Q8R0I4 213 aa12.67□□□□□ -0.38
Sqstm1-201ENSMUST00000015981 9430069I07RikQ9CX21 111 aa12.66□□□□□ -0.38
Sqstm1-201ENSMUST00000015981 Igkv1-117A0A140T8M0 119 aa12.66□□□□□ -0.38
Sqstm1-201ENSMUST00000015981 Gm10647E9Q8X0 124 aa12.66□□□□□ -0.38
Sqstm1-201ENSMUST00000015981 Ntn5Q3UQ22 452 aa12.66□□□□□ -0.38
Sqstm1-201ENSMUST00000015981 Serp2Q6TAW2 65 aa12.66□□□□□ -0.38
Sqstm1-201ENSMUST00000015981 Defa21Q8C1P2 93 aa12.66□□□□□ -0.38
Sqstm1-201ENSMUST00000015981 4930470P17RikQ9D542 155 aa12.65□□□□□ -0.38
Sqstm1-201ENSMUST00000015981 Gm16381A0A1Y7VKT9 73 aa12.65□□□□□ -0.38
Sqstm1-201ENSMUST00000015981 Cystm1Q8K353 104 aa12.65□□□□□ -0.38
Sqstm1-201ENSMUST00000015981 Tmem258P61166 79 aa12.65□□□□□ -0.39
Sqstm1-201ENSMUST00000015981 Cdc42se2Q8BGH7 84 aa12.65□□□□□ -0.39
Sqstm1-201ENSMUST00000015981 P01729 129 aa12.64□□□□□ -0.39
Sqstm1-201ENSMUST00000015981 Mrpl52Q9D0Y8 121 aa12.64□□□□□ -0.39
Sqstm1-201ENSMUST00000015981 Pfn2Q9JJV2 140 aa12.64□□□□□ -0.39
Sqstm1-201ENSMUST00000015981 Samd13D3YUG0 102 aa12.64□□□□□ -0.39
Sqstm1-201ENSMUST00000015981 CenpeQ6RT24 2474 aaKnown RBP12.64□□□□□ -0.39
Sqstm1-201ENSMUST00000015981 Fam110dQ80X91 271 aa12.63□□□□□ -0.39
Sqstm1-201ENSMUST00000015981 P01745 121 aa12.63□□□□□ -0.39
Sqstm1-201ENSMUST00000015981 P01786 117 aa12.63□□□□□ -0.39
Sqstm1-201ENSMUST00000015981 Spink1P09036 80 aa12.63□□□□□ -0.39
Sqstm1-201ENSMUST00000015981 Zfp951A0A087WRH0 451 aa12.62□□□□□ -0.39
Sqstm1-201ENSMUST00000015981 Plac8l1Q08EJ0 177 aa12.62□□□□□ -0.39
Sqstm1-201ENSMUST00000015981 Tmem243B2RVB9 118 aa12.62□□□□□ -0.39
Sqstm1-201ENSMUST00000015981 Lce6aD3YV94 81 aa12.62□□□□□ -0.39
Sqstm1-201ENSMUST00000015981 Taf15Q8BQ46 557 aaKnown RBP12.61□□□□□ -0.39
Sqstm1-201ENSMUST00000015981 GfyJ3KML8 504 aa12.61□□□□□ -0.39
Sqstm1-201ENSMUST00000015981 Rpl36aP83882 106 aaKnown RBP12.61□□□□□ -0.39
Sqstm1-201ENSMUST00000015981 Naa38Q9D2U5 125 aa12.61□□□□□ -0.39
Sqstm1-201ENSMUST00000015981 P04219 140 aa12.6□□□□□ -0.39
Sqstm1-201ENSMUST00000015981 MifP34884 115 aaKnown RBP12.6□□□□□ -0.39
Sqstm1-201ENSMUST00000015981 Tmem86bQ497J1 226 aa12.6□□□□□ -0.39
Sqstm1-201ENSMUST00000015981 Chd9Q8BYH8 2885 aa12.6□□□□□ -0.39
Sqstm1-201ENSMUST00000015981 Trav13-4-dv7A0A075B6C2 110 aa12.6□□□□□ -0.39
Sqstm1-201ENSMUST00000015981 Gm19935A0A1B0GSF9 52 aa12.6□□□□□ -0.39
Sqstm1-201ENSMUST00000015981 Prp2P05143 317 aa12.6□□□□□ -0.39
Sqstm1-201ENSMUST00000015981 Ttc28Q80XJ3 2450 aa12.6□□□□□ -0.39
Sqstm1-201ENSMUST00000015981 Ighv2-9-1A0A075B697 116 aa12.59□□□□□ -0.39
Sqstm1-201ENSMUST00000015981 Ighv1-56A0A0A6YXG2 117 aa12.58□□□□□ -0.4
Sqstm1-201ENSMUST00000015981 Trbv30A0A0B4J1P1 111 aa12.58□□□□□ -0.4
Sqstm1-201ENSMUST00000015981 Klk1b4P00757 256 aa12.58□□□□□ -0.4
Sqstm1-201ENSMUST00000015981 Q99M08 65 aa12.58□□□□□ -0.4
Sqstm1-201ENSMUST00000015981 Ighv1-58A0A075B5W9 117 aa12.58□□□□□ -0.4
Sqstm1-201ENSMUST00000015981 1810062G17RikG3X8Y2 129 aa12.58□□□□□ -0.4
Sqstm1-201ENSMUST00000015981 Pla2g2cP48076 150 aa12.58□□□□□ -0.4
Sqstm1-201ENSMUST00000015981 Notch3Q61982 2318 aa12.58□□□□□ -0.4
Sqstm1-201ENSMUST00000015981 SonQ9QX47 2444 aaKnown RBP12.57□□□□□ -0.4
Sqstm1-201ENSMUST00000015981 Tmem254aP0DN89 123 aa12.57□□□□□ -0.4
Sqstm1-201ENSMUST00000015981 Tmem254bP0DN90 123 aa12.57□□□□□ -0.4
Sqstm1-201ENSMUST00000015981 Tmem254cP0DN91 123 aa12.57□□□□□ -0.4
Sqstm1-201ENSMUST00000015981 Ube2e2Q91W82 201 aa12.57□□□□□ -0.4
Sqstm1-201ENSMUST00000015981 Gm7102J3QQ10 178 aa12.56□□□□□ -0.4
Sqstm1-201ENSMUST00000015981 PspnO70300 156 aa12.56□□□□□ -0.4
Sqstm1-201ENSMUST00000015981 Lelp1Q9DAE3 120 aa12.56□□□□□ -0.4
Sqstm1-201ENSMUST00000015981 Csmd2V9GX34 3611 aa12.56□□□□□ -0.4
Sqstm1-201ENSMUST00000015981 Ifitm6A0A1B0GS75 124 aa12.55□□□□□ -0.4
Sqstm1-201ENSMUST00000015981 Gm21994F6T2D2 329 aa12.55□□□□□ -0.4
Sqstm1-201ENSMUST00000015981 Smim26Q3V460 107 aa12.55□□□□□ -0.4
Sqstm1-201ENSMUST00000015981 Defb50Q6TU36 73 aa12.55□□□□□ -0.4
Sqstm1-201ENSMUST00000015981 Gm7849D3YX03 116 aa12.54□□□□□ -0.4
Sqstm1-201ENSMUST00000015981 CrygaP04345 174 aa12.54□□□□□ -0.4
Sqstm1-201ENSMUST00000015981 Ppp1r32Q148A4 427 aa12.54□□□□□ -0.4
Sqstm1-201ENSMUST00000015981 P01755 137 aa12.53□□□□□ -0.4
Sqstm1-201ENSMUST00000015981 Gm37988J3QM41 62 aa12.53□□□□□ -0.4
Sqstm1-201ENSMUST00000015981 B230359F08RikA0A0B4J1K3 109 aa12.52□□□□□ -0.41
Sqstm1-201ENSMUST00000015981 Trav13n-2A0A0G2JF93 110 aa12.52□□□□□ -0.41
Sqstm1-201ENSMUST00000015981 Igkv1-99F6XWB2 120 aa12.52□□□□□ -0.41
Sqstm1-201ENSMUST00000015981 GhrhP16043 103 aa12.52□□□□□ -0.41
Sqstm1-201ENSMUST00000015981 Zfand2aQ9JII7 171 aa12.51□□□□□ -0.41
Sqstm1-201ENSMUST00000015981 Ube2d4D3YUH6 135 aa12.51□□□□□ -0.41
Sqstm1-201ENSMUST00000015981 Fam19a5Q91WE9 132 aa12.51□□□□□ -0.41
Sqstm1-201ENSMUST00000015981 Gm9195A0A140LHT4 2805 aa12.5□□□□□ -0.41
Sqstm1-201ENSMUST00000015981 9430015G10RikA2ASP7 199 aa12.49□□□□□ -0.41
Sqstm1-201ENSMUST00000015981 Tmem223Q9CQE2 199 aaKnown RBP12.49□□□□□ -0.41
Sqstm1-201ENSMUST00000015981 Itpr1P11881 2749 aa12.49□□□□□ -0.41
Sqstm1-201ENSMUST00000015981 LystP97412 3788 aa12.48□□□□□ -0.41
Sqstm1-201ENSMUST00000015981 Sptbn4E9PX29 2561 aa12.48□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 253.4 ms