RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Trav13n-1A0A0G2JEU8 110 aa13.34□□□□□ -0.27
Shkbp1-201ENSMUST00000003857 Cdc42se2Q8BGH7 84 aa13.34□□□□□ -0.27
Shkbp1-201ENSMUST00000003857 Mapk1ip1lQ8BH93 242 aa13.34□□□□□ -0.27
Shkbp1-201ENSMUST00000003857 Sostdc1Q9CQN4 206 aa13.34□□□□□ -0.27
Shkbp1-201ENSMUST00000003857 Gm4861Q8C5A4 106 aa13.33□□□□□ -0.28
Shkbp1-201ENSMUST00000003857 Nf1Q04690 2841 aa13.33□□□□□ -0.28
Shkbp1-201ENSMUST00000003857 Spink1P09036 80 aa13.32□□□□□ -0.28
Shkbp1-201ENSMUST00000003857 Spata25Q9DA57 226 aa13.32□□□□□ -0.28
Shkbp1-201ENSMUST00000003857 Tmem213Q08EA8 116 aa13.32□□□□□ -0.28
Shkbp1-201ENSMUST00000003857 Gm10300Q8C8P7 189 aa13.32□□□□□ -0.28
Shkbp1-201ENSMUST00000003857 Nop10Q9CQS2 64 aa13.31□□□□□ -0.28
Shkbp1-201ENSMUST00000003857 Zfyve26Q5DU37 2529 aa13.31□□□□□ -0.28
Shkbp1-201ENSMUST00000003857 CrygaP04345 174 aa13.31□□□□□ -0.28
Shkbp1-201ENSMUST00000003857 Ly6hQ9WUC3 139 aa13.31□□□□□ -0.28
Shkbp1-201ENSMUST00000003857 P01745 121 aa13.3□□□□□ -0.28
Shkbp1-201ENSMUST00000003857 Pdzd2E9Q1M1 2796 aa13.3□□□□□ -0.28
Shkbp1-201ENSMUST00000003857 Gm10767Q3TQP0 103 aa13.3□□□□□ -0.28
Shkbp1-201ENSMUST00000003857 Chchd7Q8K2Q5 85 aa13.3□□□□□ -0.28
Shkbp1-201ENSMUST00000003857 Hectd1Q69ZR2 2618 aaKnown RBP13.29□□□□□ -0.28
Shkbp1-201ENSMUST00000003857 Wdr38Q9D994 303 aa13.29□□□□□ -0.28
Shkbp1-201ENSMUST00000003857 Phpt1Q9DAK9 124 aa13.28□□□□□ -0.28
Shkbp1-201ENSMUST00000003857 Ank2Q8C8R3 3898 aa13.28□□□□□ -0.28
Shkbp1-201ENSMUST00000003857 4930546C10RikE9Q4Y3 121 aa13.28□□□□□ -0.28
Shkbp1-201ENSMUST00000003857 RetnQ99P87 114 aa13.28□□□□□ -0.28
Shkbp1-201ENSMUST00000003857 SpinklQ8CEK3 90 aa13.27□□□□□ -0.29
Shkbp1-201ENSMUST00000003857 Crlf1Q9JM58 425 aa13.27□□□□□ -0.29
Shkbp1-201ENSMUST00000003857 Cops9Q3U898 57 aa13.27□□□□□ -0.29
Shkbp1-201ENSMUST00000003857 9430069I07RikQ9CX21 111 aa13.27□□□□□ -0.29
Shkbp1-201ENSMUST00000003857 Gm10577Q3UDV9 132 aa13.26□□□□□ -0.29
Shkbp1-201ENSMUST00000003857 Lyrm7Q9DA03 104 aa13.26□□□□□ -0.29
Shkbp1-201ENSMUST00000003857 Trav9d-3A0A075B695 113 aa13.25□□□□□ -0.29
Shkbp1-201ENSMUST00000003857 Rif1Q6PR54 2419 aaKnown RBP13.25□□□□□ -0.29
Shkbp1-201ENSMUST00000003857 1700011M02RikB1AX35 88 aa13.25□□□□□ -0.29
Shkbp1-201ENSMUST00000003857 Gm10772F7AIG4 85 aa13.24□□□□□ -0.29
Shkbp1-201ENSMUST00000003857 Lst1O08843 95 aa13.24□□□□□ -0.29
Shkbp1-201ENSMUST00000003857 Defb26Q30KN7 186 aa13.24□□□□□ -0.29
Shkbp1-201ENSMUST00000003857 Lyrm9Q3UN90 78 aa13.24□□□□□ -0.29
Shkbp1-201ENSMUST00000003857 BsnO88737 3942 aa13.23□□□□□ -0.29
Shkbp1-201ENSMUST00000003857 Gpha2Q925Q5 128 aa13.23□□□□□ -0.29
Shkbp1-201ENSMUST00000003857 CubnQ9JLB4 3623 aa13.23□□□□□ -0.29
Shkbp1-201ENSMUST00000003857 Rpl35aO55142 110 aa13.22□□□□□ -0.29
Shkbp1-201ENSMUST00000003857 Helz2E9QAM5 2947 aaKnown RBP13.22□□□□□ -0.29
Shkbp1-201ENSMUST00000003857 Defb2P82020 71 aa13.22□□□□□ -0.29
Shkbp1-201ENSMUST00000003857 Ppp1r32Q148A4 427 aa13.22□□□□□ -0.29
Shkbp1-201ENSMUST00000003857 Prr13Q9CQJ5 137 aa13.22□□□□□ -0.29
Shkbp1-201ENSMUST00000003857 Atp5g1Q9CR84 136 aa13.22□□□□□ -0.29
Shkbp1-201ENSMUST00000003857 Xirp2Q4U4S6 3784 aa13.21□□□□□ -0.29
Shkbp1-201ENSMUST00000003857 Gm10251J3QPM5 127 aa13.21□□□□□ -0.29
Shkbp1-201ENSMUST00000003857 Xlr5cQ9JJR2 179 aa13.21□□□□□ -0.29
Shkbp1-201ENSMUST00000003857 FlnaQ8BTM8 2647 aaKnown RBP13.21□□□□□ -0.3
Shkbp1-201ENSMUST00000003857 Hivep2Q3UHF7 2430 aa13.2□□□□□ -0.3
Shkbp1-201ENSMUST00000003857 Krtap16-1A2A5X5 502 aa13.2□□□□□ -0.3
Shkbp1-201ENSMUST00000003857 Prp2P05143 317 aa13.2□□□□□ -0.3
Shkbp1-201ENSMUST00000003857 Cep192E9Q4Y4 2514 aaKnown RBP13.2□□□□□ -0.3
Shkbp1-201ENSMUST00000003857 Trav13-4-dv7A0A075B6C2 110 aa13.2□□□□□ -0.3
Shkbp1-201ENSMUST00000003857 Trav9d-4A0A0G2JG37 103 aa13.2□□□□□ -0.3
Shkbp1-201ENSMUST00000003857 MalO09198 153 aa13.2□□□□□ -0.3
Shkbp1-201ENSMUST00000003857 Cd99Q8VCN6 175 aa13.2□□□□□ -0.3
Shkbp1-201ENSMUST00000003857 Ighv1-49A0A0A6YWX2 117 aa13.18□□□□□ -0.3
Shkbp1-201ENSMUST00000003857 Trav11A0A0B4J1J9 114 aa13.18□□□□□ -0.3
Shkbp1-201ENSMUST00000003857 Atp5eP56382 52 aa13.18□□□□□ -0.3
Shkbp1-201ENSMUST00000003857 Cox7a1P56392 80 aa13.18□□□□□ -0.3
Shkbp1-201ENSMUST00000003857 SelenowP63300 88 aa13.18□□□□□ -0.3
Shkbp1-201ENSMUST00000003857 TeppQ6IMH0 216 aa13.18□□□□□ -0.3
Shkbp1-201ENSMUST00000003857 Znf740Q6NZQ6 180 aa13.18□□□□□ -0.3
Shkbp1-201ENSMUST00000003857 Il19Q8CJ70 176 aa13.18□□□□□ -0.3
Shkbp1-201ENSMUST00000003857 MobpQ9D2P8 170 aa13.18□□□□□ -0.3
Shkbp1-201ENSMUST00000003857 Myo9aQ8C170 2542 aa13.18□□□□□ -0.3
Shkbp1-201ENSMUST00000003857 GfyJ3KML8 504 aa13.18□□□□□ -0.3
Shkbp1-201ENSMUST00000003857 Gm10549Q3URY4 149 aa13.18□□□□□ -0.3
Shkbp1-201ENSMUST00000003857 PemtQ61907 199 aa13.18□□□□□ -0.3
Shkbp1-201ENSMUST00000003857 Lage3Q9CR70 148 aa13.18□□□□□ -0.3
Shkbp1-201ENSMUST00000003857 Ndufa3Q9CQ91 84 aa13.17□□□□□ -0.3
Shkbp1-201ENSMUST00000003857 Tenm3Q9WTS6 2715 aa13.17□□□□□ -0.3
Shkbp1-201ENSMUST00000003857 Igkv4-72A0A0B4J1I4 117 aa13.17□□□□□ -0.3
Shkbp1-201ENSMUST00000003857 Igfn1Q3KNY0 2849 aa13.16□□□□□ -0.3
Shkbp1-201ENSMUST00000003857 Defb50Q6TU36 73 aa13.16□□□□□ -0.3
Shkbp1-201ENSMUST00000003857 Zfand2aQ9JII7 171 aa13.15□□□□□ -0.3
Shkbp1-201ENSMUST00000003857 Sh2d1aO88890 126 aa13.15□□□□□ -0.3
Shkbp1-201ENSMUST00000003857 4930544G11RikQ9CR99 193 aa13.15□□□□□ -0.3
Shkbp1-201ENSMUST00000003857 Wnk1P83741 2377 aa13.14□□□□□ -0.31
Shkbp1-201ENSMUST00000003857 Spry2Q9QXV8 315 aa13.14□□□□□ -0.31
Shkbp1-201ENSMUST00000003857 Vmo1Q5SXG7 201 aa13.13□□□□□ -0.31
Shkbp1-201ENSMUST00000003857 Tm2d2Q8R0I4 213 aa13.13□□□□□ -0.31
Shkbp1-201ENSMUST00000003857 Znf414Q9DCK4 299 aa13.13□□□□□ -0.31
Shkbp1-201ENSMUST00000003857 Unc79Q0KK59 2596 aa13.13□□□□□ -0.31
Shkbp1-201ENSMUST00000003857 Gm10647E9Q8X0 124 aa13.13□□□□□ -0.31
Shkbp1-201ENSMUST00000003857 Pglyrp4Q0VB07 374 aa13.13□□□□□ -0.31
Shkbp1-201ENSMUST00000003857 Gm43218A0A0G2JGT0 114 aa13.12□□□□□ -0.31
Shkbp1-201ENSMUST00000003857 Rpl28P41105 137 aaKnown RBP13.12□□□□□ -0.31
Shkbp1-201ENSMUST00000003857 Foxc1Q61572 553 aa13.12□□□□□ -0.31
Shkbp1-201ENSMUST00000003857 Gm7257D3YX25 99 aa13.12□□□□□ -0.31
Shkbp1-201ENSMUST00000003857 Ly6c2P0CW03 131 aa13.1□□□□□ -0.31
Shkbp1-201ENSMUST00000003857 Ighv2-9-1A0A075B697 116 aa13.09□□□□□ -0.31
Shkbp1-201ENSMUST00000003857 P01755 137 aa13.09□□□□□ -0.31
Shkbp1-201ENSMUST00000003857 Ss18l2Q9D174 77 aa13.09□□□□□ -0.31
Shkbp1-201ENSMUST00000003857 Col7a1Q63870 2944 aa13.09□□□□□ -0.31
Shkbp1-201ENSMUST00000003857 Ankrd11E9Q4F7 2643 aa13.09□□□□□ -0.31
Shkbp1-201ENSMUST00000003857 CdsnQ7TPC1 561 aa13.09□□□□□ -0.31
Shkbp1-201ENSMUST00000003857 Pla2g1bQ9Z0Y2 146 aa13.09□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 60.6 ms