RNA–Protein interactions for RNA: ENSMUST00000211945.1

Scn1b-203, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn1b, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-203ENSMUST00000211945 Ifitm1Q9D103 106 aa12.77□□□□□ -0.37
Scn1b-203ENSMUST00000211945 Ighv2-6A0A075B6A7 116 aa12.76□□□□□ -0.37
Scn1b-203ENSMUST00000211945 Rpl36-ps4A0A140T8U4 117 aa12.76□□□□□ -0.37
Scn1b-203ENSMUST00000211945 Tmem238lA0A1B0GS74 79 aa12.76□□□□□ -0.37
Scn1b-203ENSMUST00000211945 Sertad4A7DTG3 377 aa12.76□□□□□ -0.37
Scn1b-203ENSMUST00000211945 Plac8l1Q08EJ0 177 aa12.76□□□□□ -0.37
Scn1b-203ENSMUST00000211945 Defa35E9QLQ1 93 aa12.75□□□□□ -0.37
Scn1b-203ENSMUST00000211945 Stard4Q99JV5 224 aa12.75□□□□□ -0.37
Scn1b-203ENSMUST00000211945 Timm10bQ9WV96 100 aa12.75□□□□□ -0.37
Scn1b-203ENSMUST00000211945 Gm9513B3GLJ6 99 aa12.74□□□□□ -0.37
Scn1b-203ENSMUST00000211945 Rpl39P62892 51 aa12.74□□□□□ -0.37
Scn1b-203ENSMUST00000211945 Card19Q9D1I2 183 aa12.74□□□□□ -0.37
Scn1b-203ENSMUST00000211945 Ighv1-11A0A0A6YWI9 117 aa12.73□□□□□ -0.37
Scn1b-203ENSMUST00000211945 Gm28044L7N1X0 119 aa12.73□□□□□ -0.37
Scn1b-203ENSMUST00000211945 BC025920Q3US60 128 aa12.73□□□□□ -0.37
Scn1b-203ENSMUST00000211945 Tnfsf18Q7TS55 173 aa12.73□□□□□ -0.37
Scn1b-203ENSMUST00000211945 RnasekQ8K3C0 98 aa12.73□□□□□ -0.37
Scn1b-203ENSMUST00000211945 Zfp951A0A087WRH0 451 aa12.72□□□□□ -0.37
Scn1b-203ENSMUST00000211945 Reg3bP35230 175 aa12.72□□□□□ -0.37
Scn1b-203ENSMUST00000211945 Odf3l2Q3TZ65 277 aa12.72□□□□□ -0.37
Scn1b-203ENSMUST00000211945 Tm2d2Q8R0I4 213 aa12.72□□□□□ -0.37
Scn1b-203ENSMUST00000211945 Rbx1P62878 108 aa12.72□□□□□ -0.37
Scn1b-203ENSMUST00000211945 Gm4861Q8C5A4 106 aa12.72□□□□□ -0.37
Scn1b-203ENSMUST00000211945 Ryr3A2AGL3 4863 aa12.71□□□□□ -0.37
Scn1b-203ENSMUST00000211945 Gm42420A0A0J9YUQ2 99 aa12.71□□□□□ -0.38
Scn1b-203ENSMUST00000211945 P03985 172 aa12.71□□□□□ -0.38
Scn1b-203ENSMUST00000211945 Q5BN45 167 aa12.71□□□□□ -0.38
Scn1b-203ENSMUST00000211945 Tomm7Q9D173 55 aa12.71□□□□□ -0.38
Scn1b-203ENSMUST00000211945 OtorQ9JIE3 128 aa12.71□□□□□ -0.38
Scn1b-203ENSMUST00000211945 Igkv1-99F6XWB2 120 aa12.7□□□□□ -0.38
Scn1b-203ENSMUST00000211945 PemtQ61907 199 aa12.7□□□□□ -0.38
Scn1b-203ENSMUST00000211945 Gm45785A0A1B0GT05 94 aa12.69□□□□□ -0.38
Scn1b-203ENSMUST00000211945 FcorP0DJI6 106 aa12.69□□□□□ -0.38
Scn1b-203ENSMUST00000211945 Igll1P20764 209 aa12.69□□□□□ -0.38
Scn1b-203ENSMUST00000211945 Ryr2E9Q401 4966 aaKnown RBP12.68□□□□□ -0.38
Scn1b-203ENSMUST00000211945 Bsph1Q3UW26 133 aa12.68□□□□□ -0.38
Scn1b-203ENSMUST00000211945 Gm9747Q810H1 104 aa12.68□□□□□ -0.38
Scn1b-203ENSMUST00000211945 Cdc42se2Q8BGH7 84 aa12.68□□□□□ -0.38
Scn1b-203ENSMUST00000211945 Malsu1Q9CWV0 228 aa12.68□□□□□ -0.38
Scn1b-203ENSMUST00000211945 Plpp2Q9DAX2 276 aa12.68□□□□□ -0.38
Scn1b-203ENSMUST00000211945 A0A1Y7VMQ4 148 aa12.67□□□□□ -0.38
Scn1b-203ENSMUST00000211945 Insl3O09107 122 aa12.67□□□□□ -0.38
Scn1b-203ENSMUST00000211945 PolP10400 120 aa12.67□□□□□ -0.38
Scn1b-203ENSMUST00000211945 Wfdc3Q14AE4 130 aa12.67□□□□□ -0.38
Scn1b-203ENSMUST00000211945 Atxn7l1Q9CZ05 146 aa12.67□□□□□ -0.38
Scn1b-203ENSMUST00000211945 Igkv3-9A0A140T8P4 119 aa12.67□□□□□ -0.38
Scn1b-203ENSMUST00000211945 Gm13030A2APQ6 143 aa12.67□□□□□ -0.38
Scn1b-203ENSMUST00000211945 Q3UNZ8 350 aa12.67□□□□□ -0.38
Scn1b-203ENSMUST00000211945 Pla2g2eQ9QUL3 142 aa12.67□□□□□ -0.38
Scn1b-203ENSMUST00000211945 Gm21693J3QK27 380 aa12.66□□□□□ -0.38
Scn1b-203ENSMUST00000211945 MobpQ9D2P8 170 aa12.66□□□□□ -0.38
Scn1b-203ENSMUST00000211945 Gm1968Q3T9I3 115 aa12.65□□□□□ -0.38
Scn1b-203ENSMUST00000211945 Esp4A8R0T8 117 aa12.64□□□□□ -0.39
Scn1b-203ENSMUST00000211945 SmagpQ99KC7 97 aa12.64□□□□□ -0.39
Scn1b-203ENSMUST00000211945 Cox7a2lQ61387 111 aa12.63□□□□□ -0.39
Scn1b-203ENSMUST00000211945 Fam19a4Q7TPG5 135 aa12.63□□□□□ -0.39
Scn1b-203ENSMUST00000211945 Dnah9B1AR51 4484 aa12.63□□□□□ -0.39
Scn1b-203ENSMUST00000211945 Ighv2-6-8A0A0A6YWY9 116 aa12.62□□□□□ -0.39
Scn1b-203ENSMUST00000211945 Gng4P50153 75 aa12.62□□□□□ -0.39
Scn1b-203ENSMUST00000211945 Gm10842Q3U587 122 aa12.62□□□□□ -0.39
Scn1b-203ENSMUST00000211945 EnhoQ8K1D8 76 aa12.62□□□□□ -0.39
Scn1b-203ENSMUST00000211945 Igkv3-1A0A075B5P1 119 aa12.62□□□□□ -0.39
Scn1b-203ENSMUST00000211945 Ighv1-72P01751 139 aa12.62□□□□□ -0.39
Scn1b-203ENSMUST00000211945 NpyP57774 97 aa12.62□□□□□ -0.39
Scn1b-203ENSMUST00000211945 HilpdaQ9JLS0 64 aa12.62□□□□□ -0.39
Scn1b-203ENSMUST00000211945 Timm17aQ9Z0V8 171 aa12.62□□□□□ -0.39
Scn1b-203ENSMUST00000211945 Igkv4-79A0A075B5L8 119 aa12.61□□□□□ -0.39
Scn1b-203ENSMUST00000211945 Esp34G3UXG0 151 aa12.61□□□□□ -0.39
Scn1b-203ENSMUST00000211945 Trav3-3Q5R1C3 114 aa12.6□□□□□ -0.39
Scn1b-203ENSMUST00000211945 Higd1aQ9JLR9 95 aa12.6□□□□□ -0.39
Scn1b-203ENSMUST00000211945 Dnah11E9Q7N9 4488 aa12.6□□□□□ -0.39
Scn1b-203ENSMUST00000211945 PlnP61014 52 aa12.59□□□□□ -0.39
Scn1b-203ENSMUST00000211945 Hist3h2bbQ8CGP0 126 aa12.59□□□□□ -0.39
Scn1b-203ENSMUST00000211945 Tm4sf20Q9CQY8 226 aa12.59□□□□□ -0.39
Scn1b-203ENSMUST00000211945 Hist3h2baQ9D2U9 126 aa12.59□□□□□ -0.39
Scn1b-203ENSMUST00000211945 Tspan13Q9D8C2 204 aa12.59□□□□□ -0.39
Scn1b-203ENSMUST00000211945 Vps13dB1ART2 4390 aa12.59□□□□□ -0.39
Scn1b-203ENSMUST00000211945 Tfpi2O35536 230 aa12.57□□□□□ -0.4
Scn1b-203ENSMUST00000211945 SnrpeP62305 92 aaKnown RBP12.57□□□□□ -0.4
Scn1b-203ENSMUST00000211945 3110070M22RikQ9DAQ7 118 aa12.57□□□□□ -0.4
Scn1b-203ENSMUST00000211945 Q9DAQ5 155 aa12.57□□□□□ -0.4
Scn1b-203ENSMUST00000211945 Cd33Q63994 403 aa12.56□□□□□ -0.4
Scn1b-203ENSMUST00000211945 Cfap126Q6P8X9 189 aa12.56□□□□□ -0.4
Scn1b-203ENSMUST00000211945 Gm16485Q8C4B7 115 aa12.56□□□□□ -0.4
Scn1b-203ENSMUST00000211945 RetnQ99P87 114 aa12.56□□□□□ -0.4
Scn1b-203ENSMUST00000211945 Trav7-6A0A075B640 112 aa12.54□□□□□ -0.4
Scn1b-203ENSMUST00000211945 Gm9047B9EJX3 177 aa12.54□□□□□ -0.4
Scn1b-203ENSMUST00000211945 4930546C10RikE9Q4Y3 121 aa12.54□□□□□ -0.4
Scn1b-203ENSMUST00000211945 Tmem223Q9CQE2 199 aaKnown RBP12.54□□□□□ -0.4
Scn1b-203ENSMUST00000211945 Bak1O08734 209 aa12.53□□□□□ -0.4
Scn1b-203ENSMUST00000211945 Gm5617Q91VN2 117 aa12.53□□□□□ -0.4
Scn1b-203ENSMUST00000211945 Prss29Q99MS4 279 aa12.53□□□□□ -0.4
Scn1b-203ENSMUST00000211945 Hist1h2bfP10853 126 aa12.52□□□□□ -0.4
Scn1b-203ENSMUST00000211945 Ube2d1P61080 147 aaKnown RBP12.52□□□□□ -0.4
Scn1b-203ENSMUST00000211945 Hist1h2bbQ64475 126 aa12.52□□□□□ -0.4
Scn1b-203ENSMUST00000211945 Hist1h2bkQ8CGP1 126 aaKnown RBP12.52□□□□□ -0.4
Scn1b-203ENSMUST00000211945 Hist1h2bpQ8CGP2 126 aaKnown RBP12.52□□□□□ -0.4
Scn1b-203ENSMUST00000211945 Igkv6-13A0A0G2JGY3 119 aa12.52□□□□□ -0.41
Scn1b-203ENSMUST00000211945 Krtap11-1E9Q2E9 183 aa12.52□□□□□ -0.41
Scn1b-203ENSMUST00000211945 Gm11444F6QMA6 170 aa12.52□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 49.4 ms