RNA–Protein interactions for RNA: ENSMUST00000112366.7

Scn1a-203, Transcript of Sodium channel protein type 1 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn1a, Length 8,386 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1a-203ENSMUST00000112366 Igkv9-123A0A140T8N8 117 aa4.28□□□□□ -1.72
Scn1a-203ENSMUST00000112366 Fhl1P97447 280 aaKnown RBP4.28□□□□□ -1.72
Scn1a-203ENSMUST00000112366 PtprqP0C5E4 2300 aa4.28□□□□□ -1.72
Scn1a-203ENSMUST00000112366 1520401A03RikA0A0J9YVH6 598 aa4.27□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Brca1P48754 1812 aa4.27□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Ighv1-5A0A0A6YWG2 117 aa4.27□□□□□ -1.73
Scn1a-203ENSMUST00000112366 PlaurP35456 327 aa4.27□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Gm6899Q3USS0 134 aa4.27□□□□□ -1.73
Scn1a-203ENSMUST00000112366 4930535I16RikQ9CUI2 172 aa4.27□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Zfhx2Q2MHN3 2562 aa4.27□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Gm9970F6ZED4 185 aa4.27□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Mp68P56379 58 aa4.27□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Rnf185Q91YT2 192 aa4.27□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Jmjd1cQ69ZK6 2350 aa4.27□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Ighv12-3A0A075B5T1 117 aa4.27□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Igkv8-28A0A0G2JE47 121 aa4.27□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Q08AU9 97 aa4.27□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Eml5Q8BQM8 1977 aa4.27□□□□□ -1.73
Scn1a-203ENSMUST00000112366 StrcQ8VIM6 1809 aa4.27□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Col11a2Q64739 1736 aa4.26□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Ighv1-63A0A075B5X2 117 aa4.26□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Ighv1-85A0A075B5Y6 117 aa4.26□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Klk5Q9D140 293 aa4.26□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Fhl3Q9R059 289 aa4.26□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Gm11011D3Z3L9 86 aa4.26□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Ighv8-11A0A075B5X4 119 aa4.26□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Gm10553J3QPF1 123 aa4.26□□□□□ -1.73
Scn1a-203ENSMUST00000112366 P01630 113 aa4.26□□□□□ -1.73
Scn1a-203ENSMUST00000112366 P04940 107 aa4.26□□□□□ -1.73
Scn1a-203ENSMUST00000112366 P04941 107 aa4.26□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Odf3Q920N1 254 aa4.26□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Gm10762Q9CZN6 115 aa4.26□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Defb40Q70KL2 73 aa4.26□□□□□ -1.73
Scn1a-203ENSMUST00000112366 P04945 108 aa4.26□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Ndufa4l2Q4FZG9 87 aa4.26□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Higd2aQ9CQJ1 106 aa4.26□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Ighv2-6-8A0A0A6YWY9 116 aa4.26□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Obox2E9PXV9 151 aa4.26□□□□□ -1.73
Scn1a-203ENSMUST00000112366 U90926O08546 118 aa4.25□□□□□ -1.73
Scn1a-203ENSMUST00000112366 CrygeQ03740 174 aa4.25□□□□□ -1.73
Scn1a-203ENSMUST00000112366 CrygfQ9CXV3 174 aa4.25□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Gm20538F6Z9R1 75 aa4.25□□□□□ -1.73
Scn1a-203ENSMUST00000112366 P04942 107 aa4.25□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Tet1Q3URK3 2007 aaKnown RBP4.25□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Gm10267M0QWD8 85 aa4.25□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Zfp36P22893 319 aaKnown RBP4.25□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Arhgap32Q811P8 2089 aa4.25□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Ly75Q60767 1723 aa4.25□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Arid2E9Q7E2 1828 aa4.25□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Ifitm6A0A1B0GS75 124 aa4.24□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Ube2d1P61080 147 aaKnown RBP4.24□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Spint4Q9D263 159 aa4.24□□□□□ -1.73
Scn1a-203ENSMUST00000112366 1810032O08RikE9PZV8 113 aa4.24□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Gm10577Q3UDV9 132 aa4.24□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Gm5468Q8C3D3 155 aa4.24□□□□□ -1.73
Scn1a-203ENSMUST00000112366 LitafQ9JLJ0 161 aa4.24□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Thsd7aQ69ZU6 1645 aa4.24□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Gm21994F6T2D2 329 aa4.24□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Sprr2jO70561 109 aa4.24□□□□□ -1.73
Scn1a-203ENSMUST00000112366 ScxQ64124 207 aa4.24□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Q9D131 166 aa4.24□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Brwd1Q921C3 2304 aa4.24□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Ighv2-7A0A075B5Q8 116 aa4.24□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Wisp3D3Z5L9 354 aa4.24□□□□□ -1.73
Scn1a-203ENSMUST00000112366 P06328 117 aa4.24□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Spry2Q9QXV8 315 aa4.24□□□□□ -1.73
Scn1a-203ENSMUST00000112366 ThadaA8C756 1938 aa4.24□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Ighv1-75A0A075B5Y2 117 aa4.24□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Wfdc15bQ9JHY4 80 aa4.24□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Arhgap21Q6DFV3 1944 aa4.24□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Sec16aA2AIX1 2377 aa4.24□□□□□ -1.73
Scn1a-203ENSMUST00000112366 P84751 237 aa4.24□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Gm5629P06327 117 aa4.23□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Zswim8Q3UHH1 1832 aaKnown RBP4.23□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Gm12057A0A087WR21 115 aa4.23□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Wfdc15aQ8BH89 80 aa4.23□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Pip4p1Q3TWL2 284 aa4.23□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Plxna3P70208 1872 aa4.23□□□□□ -1.73
Scn1a-203ENSMUST00000112366 IgipA0A1B0GR74 53 aa4.23□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Gm17606F6ZL36 78 aa4.23□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Col8a2P25318 699 aa4.22□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Tanc2A2A690 1994 aa4.22□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Bean1Q9EQG5 255 aa4.22□□□□□ -1.73
Scn1a-203ENSMUST00000112366 P04944 107 aa4.22□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Fer1l4A3KGK3 1992 aa4.22□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Adamts9E9PUN6 1931 aa4.22□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Tcte2E9PY37 120 aa4.22□□□□□ -1.73
Scn1a-203ENSMUST00000112366 C130032M10RikQ8C888 123 aa4.22□□□□□ -1.73
Scn1a-203ENSMUST00000112366 2010109I03RikQ9CQ11 111 aa4.22□□□□□ -1.73
Scn1a-203ENSMUST00000112366 FcorP0DJI6 106 aa4.22□□□□□ -1.73
Scn1a-203ENSMUST00000112366 P01674 108 aa4.21□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Smim1P0C8K7 78 aa4.21□□□□□ -1.73
Scn1a-203ENSMUST00000112366 P18527 97 aa4.21□□□□□ -1.73
Scn1a-203ENSMUST00000112366 Hcfc1Q61191 2045 aaKnown RBP4.21□□□□□ -1.74
Scn1a-203ENSMUST00000112366 Trbv13-2A0A140T8N6 113 aa4.21□□□□□ -1.74
Scn1a-203ENSMUST00000112366 LhbO09108 141 aa4.21□□□□□ -1.74
Scn1a-203ENSMUST00000112366 SnurfQ9WU12 71 aa4.21□□□□□ -1.74
Scn1a-203ENSMUST00000112366 Ighv3-3A0A0A6YWL2 116 aa4.21□□□□□ -1.74
Scn1a-203ENSMUST00000112366 Gm10647E9Q8X0 124 aa4.21□□□□□ -1.74
Scn1a-203ENSMUST00000112366 Rnase1P00683 149 aa4.21□□□□□ -1.74
Retrieved 100 of 22,080 RNA–protein pairs in 87.6 ms