RNA–Protein interactions for RNA: ENSMUST00000112366.7

Scn1a-203, Transcript of Sodium channel protein type 1 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn1a, Length 8,386 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1a-203ENSMUST00000112366 Cngb1E1AZ71 1325 aa9.36□□□□□ -0.91
Scn1a-203ENSMUST00000112366 Rhox8Q6VSS7 320 aa9.3□□□□□ -0.92
Scn1a-203ENSMUST00000112366 Rpgrip1Q9EPQ2 1331 aa9.28□□□□□ -0.92
Scn1a-203ENSMUST00000112366 Las1lA2BE28 776 aaKnown RBP9.28□□□□□ -0.92
Scn1a-203ENSMUST00000112366 Pelp1Q9DBD5 1123 aaKnown RBP9.25□□□□□ -0.93
Scn1a-203ENSMUST00000112366 Amer1Q7TS75 1132 aa8.95□□□□□ -0.98
Scn1a-203ENSMUST00000112366 4930567H17RikQ3V0K5 233 aa8.82□□□□□ -1
Scn1a-203ENSMUST00000112366 Wdr66E9Q743 1299 aa8.79□□□□□ -1
Scn1a-203ENSMUST00000112366 CenpbP27790 599 aa8.72□□□□□ -1.01
Scn1a-203ENSMUST00000112366 Ehmt2Q9Z148 1263 aaKnown RBP8.59□□□□□ -1.03
Scn1a-203ENSMUST00000112366 Myt1Q8CFC2 1127 aa8.58□□□□□ -1.04
Scn1a-203ENSMUST00000112366 Zeb1Q64318 1117 aa8.52□□□□□ -1.05
Scn1a-203ENSMUST00000112366 Ube2uB1AUC4 352 aa8.49□□□□□ -1.05
Scn1a-203ENSMUST00000112366 Stra8P70278 393 aa8.47□□□□□ -1.05
Scn1a-203ENSMUST00000112366 Ttbk1Q6PCN3 1308 aa8.42□□□□□ -1.06
Scn1a-203ENSMUST00000112366 4933416C03RikQ3V063 378 aa8.41□□□□□ -1.06
Scn1a-203ENSMUST00000112366 Rtl5Q5DTT4 599 aa8.22□□□□□ -1.09
Scn1a-203ENSMUST00000112366 NefmP08553 848 aa8.21□□□□□ -1.09
Scn1a-203ENSMUST00000112366 DiexfQ8BTT6 772 aaKnown RBP8.2□□□□□ -1.1
Scn1a-203ENSMUST00000112366 Tnnt3Q9QZ47 272 aa8.2□□□□□ -1.1
Scn1a-203ENSMUST00000112366 Slc24a1Q91WD8 1130 aa8.19□□□□□ -1.1
Scn1a-203ENSMUST00000112366 NeflP08551 543 aa8.17□□□□□ -1.1
Scn1a-203ENSMUST00000112366 Acin1Q9JIX8 1338 aaKnown RBP8.17□□□□□ -1.1
Scn1a-203ENSMUST00000112366 Cdk11bP24788 784 aaKnown RBP8.15□□□□□ -1.1
Scn1a-203ENSMUST00000112366 Esf1Q3V1V3 845 aaKnown RBP8.14□□□□□ -1.11
Scn1a-203ENSMUST00000112366 Npm2Q80W85 207 aa8.12□□□□□ -1.11
Scn1a-203ENSMUST00000112366 Ythdc1E9Q5K9 736 aaKnown RBP8.09□□□□□ -1.11
Scn1a-203ENSMUST00000112366 Gab3Q8BSM5 595 aa8.08□□□□□ -1.12
Scn1a-203ENSMUST00000112366 Anp32bQ9EST5 272 aaKnown RBP8.08□□□□□ -1.12
Scn1a-203ENSMUST00000112366 NrdcQ8BHG1 1161 aa8.07□□□□□ -1.12
Scn1a-203ENSMUST00000112366 Ccdc136Q3TVA9 1136 aa8.03□□□□□ -1.12
Scn1a-203ENSMUST00000112366 HrcG5E8J6 738 aa8.02□□□□□ -1.13
Scn1a-203ENSMUST00000112366 Myt1lP97500 1187 aa8.02□□□□□ -1.13
Scn1a-203ENSMUST00000112366 Nop58Q6DFW4 536 aaKnown RBP7.98□□□□□ -1.13
Scn1a-203ENSMUST00000112366 Trim41Q5NCC3 630 aa7.97□□□□□ -1.13
Scn1a-203ENSMUST00000112366 DaxxO35613 739 aa7.95□□□□□ -1.14
Scn1a-203ENSMUST00000112366 CatipB9EKE5 520 aa7.95□□□□□ -1.14
Scn1a-203ENSMUST00000112366 UbtfP25976 765 aaKnown RBP7.94□□□□□ -1.14
Scn1a-203ENSMUST00000112366 Eif5bQ05D44 1216 aaKnown RBP7.94□□□□□ -1.14
Scn1a-203ENSMUST00000112366 Pcgf6Q99NA9 353 aa7.94□□□□□ -1.14
Scn1a-203ENSMUST00000112366 Anp32aO35381 247 aa7.87□□□□□ -1.15
Scn1a-203ENSMUST00000112366 NclP09405 707 aaKnown RBP7.84□□□□□ -1.15
Scn1a-203ENSMUST00000112366 Upf2A2AT37 1269 aaKnown RBP7.78□□□□□ -1.16
Scn1a-203ENSMUST00000112366 Os9Q8K2C7 672 aa7.77□□□□□ -1.17
Scn1a-203ENSMUST00000112366 Ccdc9Q8VC31 543 aaKnown RBP7.76□□□□□ -1.17
Scn1a-203ENSMUST00000112366 Neurod1Q60867 357 aa7.75□□□□□ -1.17
Scn1a-203ENSMUST00000112366 Lmod3E9QA62 571 aa7.75□□□□□ -1.17
Scn1a-203ENSMUST00000112366 Ccdc180J3QNE4 1664 aa7.74□□□□□ -1.17
Scn1a-203ENSMUST00000112366 TonslQ6NZL6 1363 aa7.7□□□□□ -1.18
Scn1a-203ENSMUST00000112366 Fam50aQ9WV03 339 aaKnown RBP7.69□□□□□ -1.18
Scn1a-203ENSMUST00000112366 Supt5hO55201 1082 aaKnown RBP7.69□□□□□ -1.18
Scn1a-203ENSMUST00000112366 Rtl1Q7M732 1744 aa7.67□□□□□ -1.18
Scn1a-203ENSMUST00000112366 Hsp90aa1P07901 733 aaKnown RBP7.66□□□□□ -1.18
Scn1a-203ENSMUST00000112366 Ppargc1bQ8VHJ7 1014 aa7.63□□□□□ -1.19
Scn1a-203ENSMUST00000112366 Trim44Q9QXA7 346 aa7.63□□□□□ -1.19
Scn1a-203ENSMUST00000112366 ArxO35085 564 aa7.61□□□□□ -1.19
Scn1a-203ENSMUST00000112366 ClspnQ80YR7 1315 aa7.6□□□□□ -1.19
Scn1a-203ENSMUST00000112366 Aplp2Q06335 707 aa7.59□□□□□ -1.19
Scn1a-203ENSMUST00000112366 Nlrp6Q91WS2 869 aa7.56□□□□□ -1.2
Scn1a-203ENSMUST00000112366 DekQ7TNV0 380 aaKnown RBP7.56□□□□□ -1.2
Scn1a-203ENSMUST00000112366 Polr3glQ8R0C0 218 aa7.53□□□□□ -1.2
Scn1a-203ENSMUST00000112366 Tnnt2P50752 301 aa7.52□□□□□ -1.21
Scn1a-203ENSMUST00000112366 Anks4bQ8K3X6 423 aa7.52□□□□□ -1.21
Scn1a-203ENSMUST00000112366 Adam1bQ8R534 806 aa7.51□□□□□ -1.21
Scn1a-203ENSMUST00000112366 Ap3b1Q9Z1T1 1105 aa7.49□□□□□ -1.21
Scn1a-203ENSMUST00000112366 Csrnp3P59055 597 aa7.49□□□□□ -1.21
Scn1a-203ENSMUST00000112366 Ppp4r2Q0VGB7 417 aa7.49□□□□□ -1.21
Scn1a-203ENSMUST00000112366 Calr4Q3TQS0 420 aa7.48□□□□□ -1.21
Scn1a-203ENSMUST00000112366 Gm38655A0A286YDK6 273 aa7.47□□□□□ -1.21
Scn1a-203ENSMUST00000112366 PtmaP26350 111 aa7.47□□□□□ -1.21
Scn1a-203ENSMUST00000112366 Wdr43Q6ZQL4 677 aaKnown RBP7.46□□□□□ -1.22
Scn1a-203ENSMUST00000112366 Vsig10D3YX43 558 aa7.45□□□□□ -1.22
Scn1a-203ENSMUST00000112366 Il27Q8K3I6 234 aa7.45□□□□□ -1.22
Scn1a-203ENSMUST00000112366 Mier1Q5UAK0 511 aa7.44□□□□□ -1.22
Scn1a-203ENSMUST00000112366 Znf316Q6PGE4 1016 aa7.43□□□□□ -1.22
Scn1a-203ENSMUST00000112366 Htatsf1Q8BGC0 757 aa7.43□□□□□ -1.22
Scn1a-203ENSMUST00000112366 Hdac5Q9Z2V6 1113 aa7.43□□□□□ -1.22
Scn1a-203ENSMUST00000112366 Chic1Q8CBW7 227 aa7.42□□□□□ -1.22
Scn1a-203ENSMUST00000112366 Ccdc27Q3V036 639 aa7.41□□□□□ -1.22
Scn1a-203ENSMUST00000112366 CanxP35564 591 aaKnown RBP7.41□□□□□ -1.22
Scn1a-203ENSMUST00000112366 Calcoco2A2A6M5 331 aa7.4□□□□□ -1.22
Scn1a-203ENSMUST00000112366 Gm13697A2AK42 830 aa7.4□□□□□ -1.23
Scn1a-203ENSMUST00000112366 Hsp90ab1P11499 724 aaKnown RBP7.39□□□□□ -1.23
Scn1a-203ENSMUST00000112366 Irx3P81067 507 aa7.39□□□□□ -1.23
Scn1a-203ENSMUST00000112366 Mak16Q8BGS0 296 aaKnown RBP7.39□□□□□ -1.23
Scn1a-203ENSMUST00000112366 Bcl11aQ9QYE3 773 aa7.38□□□□□ -1.23
Scn1a-203ENSMUST00000112366 SetQ9EQU5 289 aaKnown RBP7.37□□□□□ -1.23
Scn1a-203ENSMUST00000112366 Hnrnpul2Q00PI9 745 aaKnown RBP7.37□□□□□ -1.23
Scn1a-203ENSMUST00000112366 Znf326O88291 580 aa7.36□□□□□ -1.23
Scn1a-203ENSMUST00000112366 AU015836B2RUM3 263 aa7.35□□□□□ -1.23
Scn1a-203ENSMUST00000112366 Plcb2A3KGF7 1181 aa7.35□□□□□ -1.23
Scn1a-203ENSMUST00000112366 PnnO35691 725 aaKnown RBP7.34□□□□□ -1.23
Scn1a-203ENSMUST00000112366 Atp1b4Q99ME6 356 aa7.34□□□□□ -1.23
Scn1a-203ENSMUST00000112366 Trim30dE9PWL0 497 aa7.34□□□□□ -1.24
Scn1a-203ENSMUST00000112366 Fgd1P52734 960 aa7.34□□□□□ -1.24
Scn1a-203ENSMUST00000112366 Zbtb7cQ8VCZ7 619 aa7.34□□□□□ -1.24
Scn1a-203ENSMUST00000112366 MsnP26041 577 aaKnown RBP7.33□□□□□ -1.24
Scn1a-203ENSMUST00000112366 Zbtb4Q5F293 982 aa7.33□□□□□ -1.24
Scn1a-203ENSMUST00000112366 Prdm10Q3UTQ7 1184 aa7.32□□□□□ -1.24
Scn1a-203ENSMUST00000112366 Map7d2A2AG50 781 aa7.32□□□□□ -1.24
Retrieved 100 of 22,080 RNA–protein pairs in 7.9 ms