RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Ighv2-3A0A075B696 115 aa8.52□□□□□ -1.05
Col9a1-202ENSMUST00000088349 Gm29423A0A087WRM1 55 aa8.52□□□□□ -1.05
Col9a1-202ENSMUST00000088349 Gm11020F6ZGD5 61 aa8.52□□□□□ -1.05
Col9a1-202ENSMUST00000088349 1700020N15RikL7MTX3 112 aa8.52□□□□□ -1.05
Col9a1-202ENSMUST00000088349 P84751 237 aa8.52□□□□□ -1.05
Col9a1-202ENSMUST00000088349 C2cd3Q52KB6 2323 aa8.52□□□□□ -1.05
Col9a1-202ENSMUST00000088349 Tenm3Q9WTS6 2715 aa8.52□□□□□ -1.05
Col9a1-202ENSMUST00000088349 Igkv4-91A0A075B5L2 119 aa8.52□□□□□ -1.05
Col9a1-202ENSMUST00000088349 Igkv4-62A0A0G2JDW9 117 aa8.52□□□□□ -1.05
Col9a1-202ENSMUST00000088349 Avpi1Q9D7H4 142 aa8.52□□□□□ -1.05
Col9a1-202ENSMUST00000088349 Hspg2Q05793 3707 aaKnown RBP8.51□□□□□ -1.05
Col9a1-202ENSMUST00000088349 Ighv1-85A0A075B5Y6 117 aa8.51□□□□□ -1.05
Col9a1-202ENSMUST00000088349 Gm10226O88253 85 aa8.51□□□□□ -1.05
Col9a1-202ENSMUST00000088349 Mapk1ip1lQ8BH93 242 aa8.51□□□□□ -1.05
Col9a1-202ENSMUST00000088349 A530064D06RikQ8BNV8 229 aa8.51□□□□□ -1.05
Col9a1-202ENSMUST00000088349 Nhlrc1Q8BR37 401 aa8.51□□□□□ -1.05
Col9a1-202ENSMUST00000088349 Dynlrb2Q9DAJ5 96 aa8.51□□□□□ -1.05
Col9a1-202ENSMUST00000088349 Gm37988J3QM41 62 aa8.51□□□□□ -1.05
Col9a1-202ENSMUST00000088349 Rpl32P62911 135 aaKnown RBP8.51□□□□□ -1.05
Col9a1-202ENSMUST00000088349 Rpl32-psP17932 135 aa8.5□□□□□ -1.05
Col9a1-202ENSMUST00000088349 Cfap126Q6P8X9 189 aa8.5□□□□□ -1.05
Col9a1-202ENSMUST00000088349 Ccl24Q9JKC0 119 aa8.5□□□□□ -1.05
Col9a1-202ENSMUST00000088349 Ighv1-52A0A0A6YXC3 117 aa8.5□□□□□ -1.05
Col9a1-202ENSMUST00000088349 Atp5g3P56384 141 aa8.5□□□□□ -1.05
Col9a1-202ENSMUST00000088349 Synj2bpQ9D6K5 145 aa8.5□□□□□ -1.05
Col9a1-202ENSMUST00000088349 Gm4861Q8C5A4 106 aa8.49□□□□□ -1.05
Col9a1-202ENSMUST00000088349 Lgals4Q8K419 326 aa8.49□□□□□ -1.05
Col9a1-202ENSMUST00000088349 Phlda3Q9WV95 125 aa8.49□□□□□ -1.05
Col9a1-202ENSMUST00000088349 4930415O20RikQ8CDT5 131 aa8.49□□□□□ -1.05
Col9a1-202ENSMUST00000088349 Srp14P16254 110 aaKnown RBP8.48□□□□□ -1.05
Col9a1-202ENSMUST00000088349 Gm10490F6VBM2 120 aa8.48□□□□□ -1.05
Col9a1-202ENSMUST00000088349 Gm10251J3QPM5 127 aa8.48□□□□□ -1.05
Col9a1-202ENSMUST00000088349 AI854703Q8BIN3 203 aa8.48□□□□□ -1.05
Col9a1-202ENSMUST00000088349 Trav7-6A0A075B640 112 aa8.48□□□□□ -1.05
Col9a1-202ENSMUST00000088349 BsnO88737 3942 aa8.47□□□□□ -1.05
Col9a1-202ENSMUST00000088349 Gata1P17679 413 aa8.47□□□□□ -1.05
Col9a1-202ENSMUST00000088349 Rbmy1bQ60990 380 aa8.47□□□□□ -1.05
Col9a1-202ENSMUST00000088349 Ighv1-5A0A0A6YWG2 117 aa8.46□□□□□ -1.05
Col9a1-202ENSMUST00000088349 Defb18Q30KP5 85 aa8.46□□□□□ -1.05
Col9a1-202ENSMUST00000088349 Gm10767Q3TQP0 103 aa8.46□□□□□ -1.06
Col9a1-202ENSMUST00000088349 FlnbQ80X90 2602 aaKnown RBP8.46□□□□□ -1.06
Col9a1-202ENSMUST00000088349 B230217C12RikE9Q3Z1 139 aa8.45□□□□□ -1.06
Col9a1-202ENSMUST00000088349 Reg3gO09049 174 aa8.45□□□□□ -1.06
Col9a1-202ENSMUST00000088349 Ighv1-63A0A075B5X2 117 aa8.45□□□□□ -1.06
Col9a1-202ENSMUST00000088349 AngP21570 145 aa8.45□□□□□ -1.06
Col9a1-202ENSMUST00000088349 Ccl21aP84444 133 aa8.45□□□□□ -1.06
Col9a1-202ENSMUST00000088349 Ccl21bP86792 133 aa8.45□□□□□ -1.06
Col9a1-202ENSMUST00000088349 Ccl21cP86793 133 aa8.45□□□□□ -1.06
Col9a1-202ENSMUST00000088349 Trav9n-2A0A0G2JDP3 113 aa8.44□□□□□ -1.06
Col9a1-202ENSMUST00000088349 Gm3250E9Q1M3 230 aa8.44□□□□□ -1.06
Col9a1-202ENSMUST00000088349 Prr13Q9CQJ5 137 aa8.44□□□□□ -1.06
Col9a1-202ENSMUST00000088349 Prp2P05143 317 aa8.43□□□□□ -1.06
Col9a1-202ENSMUST00000088349 Krtap26-1Q9D7N2 215 aa8.43□□□□□ -1.06
Col9a1-202ENSMUST00000088349 Fam216aQ9DB54 251 aa8.43□□□□□ -1.06
Col9a1-202ENSMUST00000088349 Glrp1E9Q9S8 174 aa8.43□□□□□ -1.06
Col9a1-202ENSMUST00000088349 Ighv1-72P01751 139 aa8.43□□□□□ -1.06
Col9a1-202ENSMUST00000088349 GalmQ8K157 342 aa8.43□□□□□ -1.06
Col9a1-202ENSMUST00000088349 Spink10Q8CAC8 162 aa8.43□□□□□ -1.06
Col9a1-202ENSMUST00000088349 Gm7849D3YX03 116 aa8.42□□□□□ -1.06
Col9a1-202ENSMUST00000088349 Smrp1Q2MH31 260 aa8.42□□□□□ -1.06
Col9a1-202ENSMUST00000088349 Ube2wQ8VDW4 151 aa8.42□□□□□ -1.06
Col9a1-202ENSMUST00000088349 RetnQ99P87 114 aa8.42□□□□□ -1.06
Col9a1-202ENSMUST00000088349 Ifitm1Q9D103 106 aa8.42□□□□□ -1.06
Col9a1-202ENSMUST00000088349 Gm6793B2RXM2 351 aa8.42□□□□□ -1.06
Col9a1-202ENSMUST00000088349 Gm9887F6RFI0 207 aa8.42□□□□□ -1.06
Col9a1-202ENSMUST00000088349 A930009A15RikG3UYI6 118 aa8.42□□□□□ -1.06
Col9a1-202ENSMUST00000088349 Spink1P09036 80 aa8.42□□□□□ -1.06
Col9a1-202ENSMUST00000088349 Znf740Q6NZQ6 180 aa8.42□□□□□ -1.06
Col9a1-202ENSMUST00000088349 MrapQ9D159 127 aa8.42□□□□□ -1.06
Col9a1-202ENSMUST00000088349 Gm10542F6XDR3 90 aa8.41□□□□□ -1.06
Col9a1-202ENSMUST00000088349 Bri3P28662 125 aa8.41□□□□□ -1.06
Col9a1-202ENSMUST00000088349 Ube2e2Q91W82 201 aa8.41□□□□□ -1.06
Col9a1-202ENSMUST00000088349 4930564D02RikQ9D4S4 103 aa8.41□□□□□ -1.06
Col9a1-202ENSMUST00000088349 Wdr38Q9D994 303 aa8.41□□□□□ -1.06
Col9a1-202ENSMUST00000088349 Trav13n-1A0A0G2JEU8 110 aa8.41□□□□□ -1.06
Col9a1-202ENSMUST00000088349 P06329 120 aa8.41□□□□□ -1.06
Col9a1-202ENSMUST00000088349 Ly6gP35461 111 aa8.41□□□□□ -1.06
Col9a1-202ENSMUST00000088349 SpinklQ8CEK3 90 aa8.41□□□□□ -1.06
Col9a1-202ENSMUST00000088349 4930470P17RikQ9D542 155 aa8.41□□□□□ -1.06
Col9a1-202ENSMUST00000088349 3110070M22RikQ9DAQ7 118 aa8.41□□□□□ -1.06
Col9a1-202ENSMUST00000088349 Trdv5A0A075B661 115 aa8.4□□□□□ -1.06
Col9a1-202ENSMUST00000088349 Igkv4-78A0A0A6YYE5 119 aa8.4□□□□□ -1.06
Col9a1-202ENSMUST00000088349 Fhl2O70433 279 aa8.4□□□□□ -1.06
Col9a1-202ENSMUST00000088349 Eif4ebp3Q80VV3 101 aa8.4□□□□□ -1.06
Col9a1-202ENSMUST00000088349 Gm9936Q8C864 160 aa8.4□□□□□ -1.06
Col9a1-202ENSMUST00000088349 Rnf183Q8QZS5 190 aa8.4□□□□□ -1.06
Col9a1-202ENSMUST00000088349 Znf580Q9DB38 172 aa8.4□□□□□ -1.06
Col9a1-202ENSMUST00000088349 Fgf23Q9EPC2 251 aa8.4□□□□□ -1.06
Col9a1-202ENSMUST00000088349 Ighv2-6-8A0A0A6YWY9 116 aa8.4□□□□□ -1.06
Col9a1-202ENSMUST00000088349 Gm5089A1L3C8 106 aa8.4□□□□□ -1.06
Col9a1-202ENSMUST00000088349 Gm815Q3UWS2 115 aa8.4□□□□□ -1.06
Col9a1-202ENSMUST00000088349 Dmbt1Q60997 2085 aa8.4□□□□□ -1.07
Col9a1-202ENSMUST00000088349 Ighv5-9-1A0A0A6YVS4 126 aa8.4□□□□□ -1.07
Col9a1-202ENSMUST00000088349 Defb26Q30KN7 186 aa8.4□□□□□ -1.07
Col9a1-202ENSMUST00000088349 Prelid3aQ8VE85 172 aa8.4□□□□□ -1.07
Col9a1-202ENSMUST00000088349 Krtap27-1E9PX37 202 aa8.39□□□□□ -1.07
Col9a1-202ENSMUST00000088349 Ang3P97802 145 aa8.39□□□□□ -1.07
Col9a1-202ENSMUST00000088349 Ly86O88188 162 aa8.39□□□□□ -1.07
Col9a1-202ENSMUST00000088349 Gm9747Q810H1 104 aa8.39□□□□□ -1.07
Col9a1-202ENSMUST00000088349 Gm10509O88255 85 aa8.38□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 67 ms