RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Zfhx3Q61329 3726 aa7.21□□□□□ -1.25
Pcdh1-201ENSMUST00000057185 Ighv3-3A0A0A6YWL2 116 aa7.21□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 Gm10542F6XDR3 90 aa7.21□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 Ly86O88188 162 aa7.21□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 P01896 185 aa7.21□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 Crip3Q6Q6R3 243 aa7.21□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 Gm4861Q8C5A4 106 aa7.21□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 Spink10Q8CAC8 162 aa7.21□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 Svep1A2AVA0 3567 aa7.21□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 Ubr5Q80TP3 2792 aa7.21□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 Ighv5-9-1A0A0A6YVS4 126 aa7.21□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 Defa16P50714 93 aa7.21□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 Rpl36aP83882 106 aaKnown RBP7.2□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 Gphb5Q812B2 130 aa7.2□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 Ighv12-3A0A075B5T1 117 aa7.2□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 MrapQ9D159 127 aa7.2□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 Lelp1Q9DAE3 120 aa7.2□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 P84751 237 aa7.2□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 Ube2wQ8VDW4 151 aa7.2□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 4930470P17RikQ9D542 155 aa7.2□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 Ighv1-66A0A075B5X5 117 aa7.2□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 Trav9d-3A0A075B695 113 aa7.2□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 Ighv8-12A0A0G2JDE1 119 aa7.2□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 Gata1P17679 413 aa7.2□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 Cfap126Q6P8X9 189 aa7.2□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 Trav9d-4A0A0G2JG37 103 aa7.19□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 Gm6793B2RXM2 351 aa7.19□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 Gm10226O88253 85 aa7.19□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 Pglyrp1O88593 182 aa7.19□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 Defa2P28309 93 aa7.19□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 Ang3P97802 145 aa7.19□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 Nhlrc1Q8BR37 401 aa7.19□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 Ndufa3Q9CQ91 84 aa7.19□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 Glrp1E9Q9S8 174 aa7.19□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 Mfap4Q9D1H9 257 aa7.19□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 P01802 115 aa7.19□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 Ccl21aP84444 133 aa7.19□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 Ccl21bP86792 133 aa7.19□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 Ccl21cP86793 133 aa7.19□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 Fam222aQ6PGH4 453 aa7.19□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 H1fxQ80ZM5 188 aa7.19□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 Tmem101Q91VP7 257 aa7.19□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 FlnaQ8BTM8 2647 aaKnown RBP7.18□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 Prh1P05142 261 aa7.18□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 Tep1P97499 2629 aa7.18□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 Trav3-4A0A075B654 114 aa7.18□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 Ighv1-72P01751 139 aa7.18□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 Atp5g3P56384 141 aa7.18□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 Q9DAB9 146 aa7.17□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 Mast4Q811L6 2618 aa7.17□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 Ankrd17Q99NH0 2603 aaKnown RBP7.17□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 Nop10Q9CQS2 64 aa7.17□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 Dnal4Q9DCM4 105 aa7.17□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 Ighv1-85A0A075B5Y6 117 aa7.17□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 Gm10490F6VBM2 120 aa7.17□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 Ube2d1P61080 147 aaKnown RBP7.17□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 BC048562Q80ZQ7 204 aa7.16□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 Defb29Q8BGW9 78 aa7.16□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 Atp5g1Q9CR84 136 aa7.16□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 Ifitm1Q9D103 106 aa7.16□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 Crip2Q9DCT8 208 aaKnown RBP7.16□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 Defa20Q45VN2 95 aa7.16□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 Gm5089A1L3C8 106 aa7.15□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 Gm10251J3QPM5 127 aa7.15□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 Lgals4Q8K419 326 aa7.15□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 Ighv8-5A0A0A6YY60 119 aa7.15□□□□□ -1.26
Pcdh1-201ENSMUST00000057185 Usp9yF8VPU6 2556 aa7.14□□□□□ -1.27
Pcdh1-201ENSMUST00000057185 Cfc1P97766 202 aa7.14□□□□□ -1.27
Pcdh1-201ENSMUST00000057185 Gm5464Q3UY29 175 aa7.14□□□□□ -1.27
Pcdh1-201ENSMUST00000057185 Wfdc15aQ8BH89 80 aa7.14□□□□□ -1.27
Pcdh1-201ENSMUST00000057185 Psmb11Q8BG41 302 aa7.14□□□□□ -1.27
Pcdh1-201ENSMUST00000057185 Fhl2O70433 279 aa7.13□□□□□ -1.27
Pcdh1-201ENSMUST00000057185 Gatd1Q8BFQ8 220 aa7.13□□□□□ -1.27
Pcdh1-201ENSMUST00000057185 Trav13-4-dv7A0A075B6C2 110 aa7.13□□□□□ -1.27
Pcdh1-201ENSMUST00000057185 Sh2d1aO88890 126 aa7.13□□□□□ -1.27
Pcdh1-201ENSMUST00000057185 Cox7a1P56392 80 aa7.13□□□□□ -1.27
Pcdh1-201ENSMUST00000057185 Ucn2Q99ML8 113 aa7.13□□□□□ -1.27
Pcdh1-201ENSMUST00000057185 B230217C12RikE9Q3Z1 139 aa7.13□□□□□ -1.27
Pcdh1-201ENSMUST00000057185 SelenowP63300 88 aa7.13□□□□□ -1.27
Pcdh1-201ENSMUST00000057185 Igkv4-69A0A0B4J1I6 116 aa7.12□□□□□ -1.27
Pcdh1-201ENSMUST00000057185 Gm10135F6TEE5 83 aa7.12□□□□□ -1.27
Pcdh1-201ENSMUST00000057185 Gm7102J3QQ10 178 aa7.12□□□□□ -1.27
Pcdh1-201ENSMUST00000057185 PkigO70139 76 aa7.12□□□□□ -1.27
Pcdh1-201ENSMUST00000057185 Defb45Q3V490 66 aa7.12□□□□□ -1.27
Pcdh1-201ENSMUST00000057185 Crlf1Q9JM58 425 aa7.12□□□□□ -1.27
Pcdh1-201ENSMUST00000057185 Cops9Q3U898 57 aa7.12□□□□□ -1.27
Pcdh1-201ENSMUST00000057185 Gm9936Q8C864 160 aa7.12□□□□□ -1.27
Pcdh1-201ENSMUST00000057185 Atp6v0e2Q91XE7 81 aa7.12□□□□□ -1.27
Pcdh1-201ENSMUST00000057185 PrlhG3UWC3 86 aa7.11□□□□□ -1.27
Pcdh1-201ENSMUST00000057185 Prss58Q8BW11 241 aa7.11□□□□□ -1.27
Pcdh1-201ENSMUST00000057185 Ube2d3P61079 147 aa7.11□□□□□ -1.27
Pcdh1-201ENSMUST00000057185 Ube2d2P62838 147 aa7.11□□□□□ -1.27
Pcdh1-201ENSMUST00000057185 Chd6A3KFM7 2711 aa7.11□□□□□ -1.27
Pcdh1-201ENSMUST00000057185 Ighv1-11A0A0A6YWI9 117 aa7.11□□□□□ -1.27
Pcdh1-201ENSMUST00000057185 Cox8cA6H666 72 aa7.1□□□□□ -1.27
Pcdh1-201ENSMUST00000057185 Ndufa12Q7TMF3 145 aaKnown RBP7.1□□□□□ -1.27
Pcdh1-201ENSMUST00000057185 B230359F08RikA0A0B4J1K3 109 aa7.1□□□□□ -1.27
Pcdh1-201ENSMUST00000057185 Lst1O08843 95 aa7.1□□□□□ -1.27
Pcdh1-201ENSMUST00000057185 Cox17P56394 63 aa7.1□□□□□ -1.27
Pcdh1-201ENSMUST00000057185 Leap2Q91V13 76 aa7.1□□□□□ -1.27
Retrieved 100 of 22,080 RNA–protein pairs in 52.8 ms