RNA–Protein interactions for RNA: ENSMUST00000047835.7

Scaf11-201, Transcript of SR-related CTD-associated factor 11, mousemouse

TSL 5 BASIC

Gene Scaf11, Length 5,766 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11-201ENSMUST00000047835 P01843 105 aa13.7□□□□□ -0.22
Scaf11-201ENSMUST00000047835 Gm9767G3X930 207 aa13.69□□□□□ -0.22
Scaf11-201ENSMUST00000047835 C1qcQ02105 246 aa13.69□□□□□ -0.22
Scaf11-201ENSMUST00000047835 9430069I07RikQ9CX21 111 aa13.69□□□□□ -0.22
Scaf11-201ENSMUST00000047835 Igkv3-5A0A140T8M6 119 aa13.68□□□□□ -0.22
Scaf11-201ENSMUST00000047835 Cryba4Q9JJV0 196 aa13.68□□□□□ -0.22
Scaf11-201ENSMUST00000047835 B230307C23RikQ8BLB2 64 aa13.68□□□□□ -0.22
Scaf11-201ENSMUST00000047835 Tanc2A2A690 1994 aa13.68□□□□□ -0.22
Scaf11-201ENSMUST00000047835 Sigmar1O55242 223 aa13.68□□□□□ -0.22
Scaf11-201ENSMUST00000047835 Gm10295Q8CCF3 114 aa13.68□□□□□ -0.22
Scaf11-201ENSMUST00000047835 Ube2aQ9Z255 152 aa13.68□□□□□ -0.22
Scaf11-201ENSMUST00000047835 Ighv1-5A0A0A6YWG2 117 aa13.67□□□□□ -0.22
Scaf11-201ENSMUST00000047835 Trav4-3A0A0B4J1K1 110 aa13.67□□□□□ -0.22
Scaf11-201ENSMUST00000047835 PkigO70139 76 aa13.67□□□□□ -0.22
Scaf11-201ENSMUST00000047835 P01729 129 aa13.67□□□□□ -0.22
Scaf11-201ENSMUST00000047835 Trav4d-3A0A075B625 110 aa13.67□□□□□ -0.22
Scaf11-201ENSMUST00000047835 Igkv8-18A0A0B4J1J3 123 aa13.67□□□□□ -0.22
Scaf11-201ENSMUST00000047835 Fgf6P21658 208 aa13.67□□□□□ -0.22
Scaf11-201ENSMUST00000047835 Sorl1O88307 2215 aaKnown RBP13.66□□□□□ -0.22
Scaf11-201ENSMUST00000047835 Ovol3D3YYM0 189 aa13.66□□□□□ -0.22
Scaf11-201ENSMUST00000047835 Igkv1-35A0A0G2JDE5 120 aa13.66□□□□□ -0.22
Scaf11-201ENSMUST00000047835 Hrct1Q9D6B9 109 aa13.66□□□□□ -0.22
Scaf11-201ENSMUST00000047835 Igkv2-109A0A075B5K6 120 aa13.65□□□□□ -0.22
Scaf11-201ENSMUST00000047835 Piezo2Q8CD54 2822 aa13.65□□□□□ -0.23
Scaf11-201ENSMUST00000047835 Psmb8P28063 276 aa13.64□□□□□ -0.23
Scaf11-201ENSMUST00000047835 Ramp1Q9WTJ5 148 aa13.64□□□□□ -0.23
Scaf11-201ENSMUST00000047835 Chd8Q09XV5 2582 aaKnown RBP13.64□□□□□ -0.23
Scaf11-201ENSMUST00000047835 TshbP12656 138 aa13.64□□□□□ -0.23
Scaf11-201ENSMUST00000047835 Cox7cP17665 63 aa13.64□□□□□ -0.23
Scaf11-201ENSMUST00000047835 PscaP57096 123 aa13.64□□□□□ -0.23
Scaf11-201ENSMUST00000047835 Cox11Q6P8I6 275 aa13.63□□□□□ -0.23
Scaf11-201ENSMUST00000047835 Gm4707V9GXN5 68 aa13.63□□□□□ -0.23
Scaf11-201ENSMUST00000047835 Sptbn4E9PX29 2561 aa13.63□□□□□ -0.23
Scaf11-201ENSMUST00000047835 Gm44965A0A0N4SVR3 59 aa13.62□□□□□ -0.23
Scaf11-201ENSMUST00000047835 2010109I03RikQ9CQ11 111 aa13.62□□□□□ -0.23
Scaf11-201ENSMUST00000047835 Lrp4Q8VI56 1905 aa13.62□□□□□ -0.23
Scaf11-201ENSMUST00000047835 Igkv3-10A0A0G2JGN0 119 aa13.62□□□□□ -0.23
Scaf11-201ENSMUST00000047835 FcorP0DJI6 106 aa13.62□□□□□ -0.23
Scaf11-201ENSMUST00000047835 Gm3618D3Z4P5 127 aa13.62□□□□□ -0.23
Scaf11-201ENSMUST00000047835 1700010B08RikQ9DAI7 102 aa13.61□□□□□ -0.23
Scaf11-201ENSMUST00000047835 Gm5629P06327 117 aa13.6□□□□□ -0.23
Scaf11-201ENSMUST00000047835 P18527 97 aa13.6□□□□□ -0.23
Scaf11-201ENSMUST00000047835 Rnf185Q91YT2 192 aa13.6□□□□□ -0.23
Scaf11-201ENSMUST00000047835 Ufsp1Q9CZP0 217 aa13.6□□□□□ -0.23
Scaf11-201ENSMUST00000047835 Pcnx2Q5DU28 2122 aa13.59□□□□□ -0.23
Scaf11-201ENSMUST00000047835 CrygfQ9CXV3 174 aa13.59□□□□□ -0.23
Scaf11-201ENSMUST00000047835 Nav2E9Q842 2432 aa13.59□□□□□ -0.23
Scaf11-201ENSMUST00000047835 Flg2Q2VIS4 2362 aa13.59□□□□□ -0.23
Scaf11-201ENSMUST00000047835 Gm26566Q8CAC1 153 aa13.59□□□□□ -0.23
Scaf11-201ENSMUST00000047835 AngP21570 145 aa13.58□□□□□ -0.23
Scaf11-201ENSMUST00000047835 Pkd1l2Q7TN88 2461 aa13.58□□□□□ -0.23
Scaf11-201ENSMUST00000047835 Gm12057A0A087WR21 115 aa13.58□□□□□ -0.24
Scaf11-201ENSMUST00000047835 Lypd6Q8BPP5 171 aa13.58□□□□□ -0.24
Scaf11-201ENSMUST00000047835 1700056E22RikF7CNM6 234 aa13.58□□□□□ -0.24
Scaf11-201ENSMUST00000047835 Fam240bJ3QMB3 78 aa13.58□□□□□ -0.24
Scaf11-201ENSMUST00000047835 P0C913 63 aa13.58□□□□□ -0.24
Scaf11-201ENSMUST00000047835 Fam19a1Q7TPG8 133 aa13.58□□□□□ -0.24
Scaf11-201ENSMUST00000047835 Ighv1-62-2A0A0A6YXZ4 119 aa13.57□□□□□ -0.24
Scaf11-201ENSMUST00000047835 LhbO09108 141 aa13.57□□□□□ -0.24
Scaf11-201ENSMUST00000047835 BB014433Q8C5R5 389 aa13.57□□□□□ -0.24
Scaf11-201ENSMUST00000047835 Dscaml1Q4VA61 2053 aa13.57□□□□□ -0.24
Scaf11-201ENSMUST00000047835 Pet100P0DJE0 76 aa13.57□□□□□ -0.24
Scaf11-201ENSMUST00000047835 Cfc1P97766 202 aa13.57□□□□□ -0.24
Scaf11-201ENSMUST00000047835 Tln1P26039 2541 aaKnown RBP13.57□□□□□ -0.24
Scaf11-201ENSMUST00000047835 Eif4ebp1Q60876 117 aa13.56□□□□□ -0.24
Scaf11-201ENSMUST00000047835 Triap1Q9D8Z2 76 aa13.56□□□□□ -0.24
Scaf11-201ENSMUST00000047835 Ly6gP35461 111 aa13.56□□□□□ -0.24
Scaf11-201ENSMUST00000047835 Golgb1E9PVZ8 3238 aa13.56□□□□□ -0.24
Scaf11-201ENSMUST00000047835 CrygdP04342 174 aa13.56□□□□□ -0.24
Scaf11-201ENSMUST00000047835 Ighv1-59A0A0A6YXE0 117 aa13.55□□□□□ -0.24
Scaf11-201ENSMUST00000047835 Ighv2-6A0A075B6A7 116 aa13.54□□□□□ -0.24
Scaf11-201ENSMUST00000047835 Cd27P41272 250 aa13.54□□□□□ -0.24
Scaf11-201ENSMUST00000047835 Ighv8-12A0A0G2JDE1 119 aa13.53□□□□□ -0.24
Scaf11-201ENSMUST00000047835 Gm16223Q8CBM3 117 aa13.53□□□□□ -0.24
Scaf11-201ENSMUST00000047835 Gm37389A0A0A6YW05 95 aa13.52□□□□□ -0.24
Scaf11-201ENSMUST00000047835 Rpl39lQ9CQD0 51 aa13.52□□□□□ -0.24
Scaf11-201ENSMUST00000047835 BC107364E9Q5A2 140 aa13.52□□□□□ -0.25
Scaf11-201ENSMUST00000047835 Gm10490F6VBM2 120 aa13.52□□□□□ -0.25
Scaf11-201ENSMUST00000047835 Ighv1-72P01751 139 aa13.52□□□□□ -0.25
Scaf11-201ENSMUST00000047835 Gm9573F7C950 1606 aa13.51□□□□□ -0.25
Scaf11-201ENSMUST00000047835 Ighv1-66A0A075B5X5 117 aa13.51□□□□□ -0.25
Scaf11-201ENSMUST00000047835 Ighv3-3A0A0A6YWL2 116 aa13.51□□□□□ -0.25
Scaf11-201ENSMUST00000047835 Gm20726G3UX18 150 aa13.51□□□□□ -0.25
Scaf11-201ENSMUST00000047835 Trav11A0A0B4J1J9 114 aa13.51□□□□□ -0.25
Scaf11-201ENSMUST00000047835 Fgfbp3Q1HCM0 245 aa13.5□□□□□ -0.25
Scaf11-201ENSMUST00000047835 Tmem243B2RVB9 118 aa13.5□□□□□ -0.25
Scaf11-201ENSMUST00000047835 Defb10Q8R2I8 73 aa13.5□□□□□ -0.25
Scaf11-201ENSMUST00000047835 Defb42Q8BVB5 75 aa13.49□□□□□ -0.25
Scaf11-201ENSMUST00000047835 Gata1P17679 413 aa13.49□□□□□ -0.25
Scaf11-201ENSMUST00000047835 Bri3P28662 125 aa13.48□□□□□ -0.25
Scaf11-201ENSMUST00000047835 Arid1bE9Q4N7 2244 aa13.47□□□□□ -0.25
Scaf11-201ENSMUST00000047835 Pcp4P63054 62 aa13.47□□□□□ -0.25
Scaf11-201ENSMUST00000047835 A930009A15RikG3UYI6 118 aa13.47□□□□□ -0.25
Scaf11-201ENSMUST00000047835 Lrrk2Q5S006 2527 aa13.47□□□□□ -0.25
Scaf11-201ENSMUST00000047835 Prrc2aQ7TSC1 2158 aaKnown RBP13.47□□□□□ -0.25
Scaf11-201ENSMUST00000047835 Gm26602M0QWA4 95 aa13.47□□□□□ -0.25
Scaf11-201ENSMUST00000047835 Abca2P41234 2434 aa13.46□□□□□ -0.25
Scaf11-201ENSMUST00000047835 Kiaa1549Q68FD9 1940 aa13.46□□□□□ -0.26
Scaf11-201ENSMUST00000047835 A0A286YCN5 57 aa13.46□□□□□ -0.26
Scaf11-201ENSMUST00000047835 Rbx1P62878 108 aa13.46□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 53.8 ms