RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Cox7b2Q9D2H1 82 aa7.66□□□□□ -1.18
Ccdc40-201ENSMUST00000035935 Atp5eP56382 52 aa7.65□□□□□ -1.18
Ccdc40-201ENSMUST00000035935 Tcl1b3P56842 122 aa7.65□□□□□ -1.18
Ccdc40-201ENSMUST00000035935 Igkv4-69A0A0B4J1I6 116 aa7.65□□□□□ -1.18
Ccdc40-201ENSMUST00000035935 Igkv4-79A0A075B5L8 119 aa7.65□□□□□ -1.19
Ccdc40-201ENSMUST00000035935 Cd27P41272 250 aa7.65□□□□□ -1.19
Ccdc40-201ENSMUST00000035935 Tmem213Q08EA8 116 aa7.65□□□□□ -1.19
Ccdc40-201ENSMUST00000035935 DysfQ9ESD7 2090 aa7.65□□□□□ -1.19
Ccdc40-201ENSMUST00000035935 LhbO09108 141 aa7.64□□□□□ -1.19
Ccdc40-201ENSMUST00000035935 Trav11A0A0B4J1J9 114 aa7.64□□□□□ -1.19
Ccdc40-201ENSMUST00000035935 4930564D02RikQ9D4S4 103 aa7.64□□□□□ -1.19
Ccdc40-201ENSMUST00000035935 Q9D8Q6 235 aa7.64□□□□□ -1.19
Ccdc40-201ENSMUST00000035935 Gm10322F7D7I4 111 aa7.64□□□□□ -1.19
Ccdc40-201ENSMUST00000035935 MplkipQ9D011 178 aa7.64□□□□□ -1.19
Ccdc40-201ENSMUST00000035935 Klk5Q9D140 293 aa7.64□□□□□ -1.19
Ccdc40-201ENSMUST00000035935 Q9DAB9 146 aa7.64□□□□□ -1.19
Ccdc40-201ENSMUST00000035935 Col4a2P08122 1707 aa7.64□□□□□ -1.19
Ccdc40-201ENSMUST00000035935 Gm10518F6UQQ9 182 aa7.64□□□□□ -1.19
Ccdc40-201ENSMUST00000035935 Trav7-6A0A075B640 112 aa7.63□□□□□ -1.19
Ccdc40-201ENSMUST00000035935 Igkv4-78A0A0A6YYE5 119 aa7.63□□□□□ -1.19
Ccdc40-201ENSMUST00000035935 Kiaa1549Q68FD9 1940 aa7.63□□□□□ -1.19
Ccdc40-201ENSMUST00000035935 Pet100P0DJE0 76 aa7.63□□□□□ -1.19
Ccdc40-201ENSMUST00000035935 Spink10Q8CAC8 162 aa7.63□□□□□ -1.19
Ccdc40-201ENSMUST00000035935 Trav13-4-dv7A0A075B6C2 110 aa7.63□□□□□ -1.19
Ccdc40-201ENSMUST00000035935 Ighv8-5A0A0A6YY60 119 aa7.62□□□□□ -1.19
Ccdc40-201ENSMUST00000035935 Smim1P0C8K7 78 aa7.62□□□□□ -1.19
Ccdc40-201ENSMUST00000035935 Ly6c2P0CW03 131 aa7.62□□□□□ -1.19
Ccdc40-201ENSMUST00000035935 1520401A03RikA0A0J9YVH6 598 aa7.62□□□□□ -1.19
Ccdc40-201ENSMUST00000035935 Fam222aQ6PGH4 453 aa7.61□□□□□ -1.19
Ccdc40-201ENSMUST00000035935 Trav9n-4A0A075B631 113 aa7.61□□□□□ -1.19
Ccdc40-201ENSMUST00000035935 Med13lQ6JPI3 2207 aa7.61□□□□□ -1.19
Ccdc40-201ENSMUST00000035935 Gm17472A0A075B683 117 aa7.61□□□□□ -1.19
Ccdc40-201ENSMUST00000035935 Foxc1Q61572 553 aa7.61□□□□□ -1.19
Ccdc40-201ENSMUST00000035935 Higd2aQ9CQJ1 106 aa7.61□□□□□ -1.19
Ccdc40-201ENSMUST00000035935 Ighv1-5A0A0A6YWG2 117 aa7.61□□□□□ -1.19
Ccdc40-201ENSMUST00000035935 Pde6gP09174 87 aa7.61□□□□□ -1.19
Ccdc40-201ENSMUST00000035935 Pla2g2eQ9QUL3 142 aa7.61□□□□□ -1.19
Ccdc40-201ENSMUST00000035935 GhrhP16043 103 aa7.6□□□□□ -1.19
Ccdc40-201ENSMUST00000035935 Camk2n2Q78WH7 79 aa7.6□□□□□ -1.19
Ccdc40-201ENSMUST00000035935 Wipf1Q8K1I7 493 aa7.6□□□□□ -1.19
Ccdc40-201ENSMUST00000035935 Cryba4Q9JJV0 196 aa7.6□□□□□ -1.19
Ccdc40-201ENSMUST00000035935 Gm16223Q8CBM3 117 aa7.6□□□□□ -1.19
Ccdc40-201ENSMUST00000035935 Crip3Q6Q6R3 243 aa7.6□□□□□ -1.19
Ccdc40-201ENSMUST00000035935 B230307C23RikQ8BLB2 64 aa7.6□□□□□ -1.19
Ccdc40-201ENSMUST00000035935 Prr9Q8BV84 116 aa7.6□□□□□ -1.19
Ccdc40-201ENSMUST00000035935 Spry2Q9QXV8 315 aa7.59□□□□□ -1.19
Ccdc40-201ENSMUST00000035935 Gm10509O88255 85 aa7.59□□□□□ -1.19
Ccdc40-201ENSMUST00000035935 SrcapA0A087WQ44 3271 aa7.59□□□□□ -1.19
Ccdc40-201ENSMUST00000035935 Krtap27-1E9PX37 202 aa7.59□□□□□ -1.19
Ccdc40-201ENSMUST00000035935 P01729 129 aa7.59□□□□□ -1.19
Ccdc40-201ENSMUST00000035935 Znf580Q9DB38 172 aa7.59□□□□□ -1.19
Ccdc40-201ENSMUST00000035935 Gm10490F6VBM2 120 aa7.59□□□□□ -1.2
Ccdc40-201ENSMUST00000035935 Flg2Q2VIS4 2362 aa7.58□□□□□ -1.2
Ccdc40-201ENSMUST00000035935 Cd99Q8VCN6 175 aa7.58□□□□□ -1.2
Ccdc40-201ENSMUST00000035935 Sptbn4E9PX29 2561 aa7.58□□□□□ -1.2
Ccdc40-201ENSMUST00000035935 Trav13-2A0A075B649 110 aa7.58□□□□□ -1.2
Ccdc40-201ENSMUST00000035935 Prh1P05142 261 aa7.58□□□□□ -1.2
Ccdc40-201ENSMUST00000035935 B230359F08RikA0A0B4J1K3 109 aa7.57□□□□□ -1.2
Ccdc40-201ENSMUST00000035935 Gm9922Q8C3P1 144 aa7.57□□□□□ -1.2
Ccdc40-201ENSMUST00000035935 Gm12353A2AGJ4 60 aa7.57□□□□□ -1.2
Ccdc40-201ENSMUST00000035935 Reg3bP35230 175 aa7.57□□□□□ -1.2
Ccdc40-201ENSMUST00000035935 Defa21Q8C1P2 93 aa7.57□□□□□ -1.2
Ccdc40-201ENSMUST00000035935 Tnfrsf23Q9ER63 176 aa7.57□□□□□ -1.2
Ccdc40-201ENSMUST00000035935 Ighv8-12A0A0G2JDE1 119 aa7.57□□□□□ -1.2
Ccdc40-201ENSMUST00000035935 E130114P18RikF6S0S7 154 aa7.57□□□□□ -1.2
Ccdc40-201ENSMUST00000035935 Trav13-1A0A075B644 110 aa7.56□□□□□ -1.2
Ccdc40-201ENSMUST00000035935 Ighv1-59A0A0A6YXE0 117 aa7.56□□□□□ -1.2
Ccdc40-201ENSMUST00000035935 Ormdl1Q921I0 153 aa7.56□□□□□ -1.2
Ccdc40-201ENSMUST00000035935 A930009A15RikG3UYI6 118 aa7.56□□□□□ -1.2
Ccdc40-201ENSMUST00000035935 Sh2d1aO88890 126 aa7.56□□□□□ -1.2
Ccdc40-201ENSMUST00000035935 Gm17577J3QNF7 156 aa7.56□□□□□ -1.2
Ccdc40-201ENSMUST00000035935 BtcQ05928 177 aa7.56□□□□□ -1.2
Ccdc40-201ENSMUST00000035935 Defb42Q8BVB5 75 aa7.56□□□□□ -1.2
Ccdc40-201ENSMUST00000035935 Gata1P17679 413 aa7.56□□□□□ -1.2
Ccdc40-201ENSMUST00000035935 Cfc1P97766 202 aa7.56□□□□□ -1.2
Ccdc40-201ENSMUST00000035935 Ube2d1P61080 147 aaKnown RBP7.55□□□□□ -1.2
Ccdc40-201ENSMUST00000035935 Gm10735Q3US96 136 aa7.55□□□□□ -1.2
Ccdc40-201ENSMUST00000035935 Ighv1-62-1A0A075B5U3 116 aa7.55□□□□□ -1.2
Ccdc40-201ENSMUST00000035935 Igkv1-122A0A140T8M9 119 aa7.55□□□□□ -1.2
Ccdc40-201ENSMUST00000035935 Tmem243B2RVB9 118 aa7.55□□□□□ -1.2
Ccdc40-201ENSMUST00000035935 Defa27F2Z403 93 aa7.55□□□□□ -1.2
Ccdc40-201ENSMUST00000035935 Ube2bP63147 152 aa7.55□□□□□ -1.2
Ccdc40-201ENSMUST00000035935 Gm10577Q3UDV9 132 aa7.54□□□□□ -1.2
Ccdc40-201ENSMUST00000035935 Tmem254aP0DN89 123 aa7.54□□□□□ -1.2
Ccdc40-201ENSMUST00000035935 Tmem254bP0DN90 123 aa7.54□□□□□ -1.2
Ccdc40-201ENSMUST00000035935 Tmem254cP0DN91 123 aa7.54□□□□□ -1.2
Ccdc40-201ENSMUST00000035935 Rbx1P62878 108 aa7.54□□□□□ -1.2
Ccdc40-201ENSMUST00000035935 OtoglF7A4A7 2325 aa7.54□□□□□ -1.2
Ccdc40-201ENSMUST00000035935 Trav13n-2A0A0G2JF93 110 aa7.54□□□□□ -1.2
Ccdc40-201ENSMUST00000035935 PrlhG3UWC3 86 aa7.54□□□□□ -1.2
Ccdc40-201ENSMUST00000035935 B9d2Q3UK10 175 aa7.54□□□□□ -1.2
Ccdc40-201ENSMUST00000035935 Igkv1-35A0A0G2JDE5 120 aa7.54□□□□□ -1.2
Ccdc40-201ENSMUST00000035935 Gm3285A0A1W2P7U0 201 aa7.54□□□□□ -1.2
Ccdc40-201ENSMUST00000035935 MifP34884 115 aaKnown RBP7.54□□□□□ -1.2
Ccdc40-201ENSMUST00000035935 Rpl39lQ9CQD0 51 aa7.53□□□□□ -1.2
Ccdc40-201ENSMUST00000035935 Ube2d3P61079 147 aa7.53□□□□□ -1.2
Ccdc40-201ENSMUST00000035935 Ube2d2P62838 147 aa7.53□□□□□ -1.2
Ccdc40-201ENSMUST00000035935 Tln1P26039 2541 aaKnown RBP7.53□□□□□ -1.2
Ccdc40-201ENSMUST00000035935 Sdk1Q3UH53 2193 aa7.53□□□□□ -1.2
Ccdc40-201ENSMUST00000035935 P01823 113 aa7.53□□□□□ -1.2
Retrieved 100 of 22,080 RNA–protein pairs in 20.6 ms