RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Trav9d-4A0A0G2JG37 103 aa8.44□□□□□ -1.06
Topbp1-201ENSMUST00000035164 Odf1Q61999 247 aa8.44□□□□□ -1.06
Topbp1-201ENSMUST00000035164 Usp9yF8VPU6 2556 aa8.44□□□□□ -1.06
Topbp1-201ENSMUST00000035164 Ighv2-7A0A075B5Q8 116 aa8.44□□□□□ -1.06
Topbp1-201ENSMUST00000035164 Nsun4C4P6S0 806 aaKnown RBP8.44□□□□□ -1.06
Topbp1-201ENSMUST00000035164 P01820 115 aa8.44□□□□□ -1.06
Topbp1-201ENSMUST00000035164 Mzt1Q8BUR9 78 aa8.44□□□□□ -1.06
Topbp1-201ENSMUST00000035164 Pla2g2dQ9WVF6 144 aa8.44□□□□□ -1.06
Topbp1-201ENSMUST00000035164 Hbb-b2P02089 147 aa8.43□□□□□ -1.06
Topbp1-201ENSMUST00000035164 1810032O08RikE9PZV8 113 aa8.43□□□□□ -1.06
Topbp1-201ENSMUST00000035164 Klk1b4P00757 256 aa8.43□□□□□ -1.06
Topbp1-201ENSMUST00000035164 Defb45Q3V490 66 aa8.43□□□□□ -1.06
Topbp1-201ENSMUST00000035164 Igkv6-13A0A0G2JGY3 119 aa8.43□□□□□ -1.06
Topbp1-201ENSMUST00000035164 Lmo4P61969 165 aa8.43□□□□□ -1.06
Topbp1-201ENSMUST00000035164 Defa21Q8C1P2 93 aa8.43□□□□□ -1.06
Topbp1-201ENSMUST00000035164 Dnal4Q9DCM4 105 aa8.43□□□□□ -1.06
Topbp1-201ENSMUST00000035164 Reg3gO09049 174 aa8.42□□□□□ -1.06
Topbp1-201ENSMUST00000035164 Gphb5Q812B2 130 aa8.42□□□□□ -1.06
Topbp1-201ENSMUST00000035164 SelenowP63300 88 aa8.42□□□□□ -1.06
Topbp1-201ENSMUST00000035164 PtprqP0C5E4 2300 aa8.42□□□□□ -1.06
Topbp1-201ENSMUST00000035164 Unc79Q0KK59 2596 aa8.41□□□□□ -1.06
Topbp1-201ENSMUST00000035164 NpwA0A1L1STR8 176 aa8.41□□□□□ -1.06
Topbp1-201ENSMUST00000035164 Ighv1-72P01751 139 aa8.41□□□□□ -1.06
Topbp1-201ENSMUST00000035164 Gm9936Q8C864 160 aa8.41□□□□□ -1.06
Topbp1-201ENSMUST00000035164 Prr13Q9CQJ5 137 aa8.41□□□□□ -1.06
Topbp1-201ENSMUST00000035164 Gm815Q3UWS2 115 aa8.41□□□□□ -1.06
Topbp1-201ENSMUST00000035164 Ighv1-75A0A075B5Y2 117 aa8.41□□□□□ -1.06
Topbp1-201ENSMUST00000035164 Lce6aD3YV94 81 aa8.41□□□□□ -1.06
Topbp1-201ENSMUST00000035164 Hist1h4aP62806 103 aaKnown RBP8.41□□□□□ -1.06
Topbp1-201ENSMUST00000035164 Ndufa11Q9D8B4 141 aa8.41□□□□□ -1.06
Topbp1-201ENSMUST00000035164 NbeaQ9EPN1 2936 aa8.4□□□□□ -1.06
Topbp1-201ENSMUST00000035164 Ighv12-3A0A075B5T1 117 aa8.4□□□□□ -1.06
Topbp1-201ENSMUST00000035164 Smrp1Q2MH31 260 aa8.4□□□□□ -1.06
Topbp1-201ENSMUST00000035164 Zfp951A0A087WRH0 451 aa8.4□□□□□ -1.06
Topbp1-201ENSMUST00000035164 CdsnQ7TPC1 561 aa8.4□□□□□ -1.06
Topbp1-201ENSMUST00000035164 P84751 237 aa8.4□□□□□ -1.07
Topbp1-201ENSMUST00000035164 Trbv16A0A0B4J1H3 115 aa8.39□□□□□ -1.07
Topbp1-201ENSMUST00000035164 Defa23Q5G866 93 aa8.39□□□□□ -1.07
Topbp1-201ENSMUST00000035164 Ighv1-66A0A075B5X5 117 aa8.39□□□□□ -1.07
Topbp1-201ENSMUST00000035164 Tcte2E9PY37 120 aa8.39□□□□□ -1.07
Topbp1-201ENSMUST00000035164 Epg5Q80TA9 2572 aa8.39□□□□□ -1.07
Topbp1-201ENSMUST00000035164 Pglyrp4Q0VB07 374 aa8.39□□□□□ -1.07
Topbp1-201ENSMUST00000035164 Defa20Q45VN2 95 aa8.38□□□□□ -1.07
Topbp1-201ENSMUST00000035164 Rpl32P62911 135 aaKnown RBP8.38□□□□□ -1.07
Topbp1-201ENSMUST00000035164 BB014433Q8C5R5 389 aa8.38□□□□□ -1.07
Topbp1-201ENSMUST00000035164 Trav14d-3-dv8A0A075B619 120 aa8.38□□□□□ -1.07
Topbp1-201ENSMUST00000035164 Ighv1-49A0A0A6YWX2 117 aa8.38□□□□□ -1.07
Topbp1-201ENSMUST00000035164 Igkv1-35A0A0G2JDE5 120 aa8.38□□□□□ -1.07
Topbp1-201ENSMUST00000035164 Pglyrp1O88593 182 aa8.38□□□□□ -1.07
Topbp1-201ENSMUST00000035164 Ndufa12Q7TMF3 145 aaKnown RBP8.38□□□□□ -1.07
Topbp1-201ENSMUST00000035164 Ly6hQ9WUC3 139 aa8.38□□□□□ -1.07
Topbp1-201ENSMUST00000035164 Ighv3-3A0A0A6YWL2 116 aa8.37□□□□□ -1.07
Topbp1-201ENSMUST00000035164 Gm21994F6T2D2 329 aa8.37□□□□□ -1.07
Topbp1-201ENSMUST00000035164 Lst1O08843 95 aa8.37□□□□□ -1.07
Topbp1-201ENSMUST00000035164 Tomm7Q9D173 55 aa8.37□□□□□ -1.07
Topbp1-201ENSMUST00000035164 Notch2O35516 2470 aa8.37□□□□□ -1.07
Topbp1-201ENSMUST00000035164 Ighv1-85A0A075B5Y6 117 aa8.37□□□□□ -1.07
Topbp1-201ENSMUST00000035164 Trav4d-3A0A075B625 110 aa8.37□□□□□ -1.07
Topbp1-201ENSMUST00000035164 P01738 130 aa8.37□□□□□ -1.07
Topbp1-201ENSMUST00000035164 Prh1P05142 261 aa8.37□□□□□ -1.07
Topbp1-201ENSMUST00000035164 Mapk1ip1lQ8BH93 242 aa8.36□□□□□ -1.07
Topbp1-201ENSMUST00000035164 Socs3O35718 225 aa8.36□□□□□ -1.07
Topbp1-201ENSMUST00000035164 Rpl36aP83882 106 aaKnown RBP8.36□□□□□ -1.07
Topbp1-201ENSMUST00000035164 Trav9d-3A0A075B695 113 aa8.36□□□□□ -1.07
Topbp1-201ENSMUST00000035164 Ighv2-3A0A075B696 115 aa8.36□□□□□ -1.07
Topbp1-201ENSMUST00000035164 Ighv1-52A0A0A6YXC3 117 aa8.36□□□□□ -1.07
Topbp1-201ENSMUST00000035164 Ang3P97802 145 aa8.36□□□□□ -1.07
Topbp1-201ENSMUST00000035164 Taf15Q8BQ46 557 aaKnown RBP8.36□□□□□ -1.07
Topbp1-201ENSMUST00000035164 Xcl1P47993 114 aa8.35□□□□□ -1.07
Topbp1-201ENSMUST00000035164 Ighv1-58A0A075B5W9 117 aa8.35□□□□□ -1.07
Topbp1-201ENSMUST00000035164 Prss58Q8BW11 241 aa8.35□□□□□ -1.07
Topbp1-201ENSMUST00000035164 Ifitm1Q9D103 106 aa8.35□□□□□ -1.07
Topbp1-201ENSMUST00000035164 Igf1P05017 153 aa8.34□□□□□ -1.07
Topbp1-201ENSMUST00000035164 Cops9Q3U898 57 aa8.34□□□□□ -1.07
Topbp1-201ENSMUST00000035164 Sprr3O09116 238 aa8.34□□□□□ -1.07
Topbp1-201ENSMUST00000035164 Trbv30A0A0B4J1P1 111 aa8.34□□□□□ -1.08
Topbp1-201ENSMUST00000035164 Trav13-4-dv7A0A075B6C2 110 aa8.33□□□□□ -1.08
Topbp1-201ENSMUST00000035164 MalO09198 153 aa8.33□□□□□ -1.08
Topbp1-201ENSMUST00000035164 NrgnP60761 78 aa8.33□□□□□ -1.08
Topbp1-201ENSMUST00000035164 P01786 117 aa8.33□□□□□ -1.08
Topbp1-201ENSMUST00000035164 PlaurP35456 327 aa8.33□□□□□ -1.08
Topbp1-201ENSMUST00000035164 Naa38Q9D2U5 125 aa8.33□□□□□ -1.08
Topbp1-201ENSMUST00000035164 B230359F08RikA0A0B4J1K3 109 aa8.33□□□□□ -1.08
Topbp1-201ENSMUST00000035164 P01823 113 aa8.33□□□□□ -1.08
Topbp1-201ENSMUST00000035164 Trav13n-2A0A0G2JF93 110 aa8.32□□□□□ -1.08
Topbp1-201ENSMUST00000035164 Gm10490F6VBM2 120 aa8.32□□□□□ -1.08
Topbp1-201ENSMUST00000035164 Rpl35aO55142 110 aa8.32□□□□□ -1.08
Topbp1-201ENSMUST00000035164 4930432M17RikQ3V0W9 174 aa8.32□□□□□ -1.08
Topbp1-201ENSMUST00000035164 Chd9Q8BYH8 2885 aa8.32□□□□□ -1.08
Topbp1-201ENSMUST00000035164 Igkv4-62A0A0G2JDW9 117 aa8.32□□□□□ -1.08
Topbp1-201ENSMUST00000035164 PemtQ61907 199 aa8.32□□□□□ -1.08
Topbp1-201ENSMUST00000035164 9430069I07RikQ9CX21 111 aa8.32□□□□□ -1.08
Topbp1-201ENSMUST00000035164 MplkipQ9D011 178 aa8.31□□□□□ -1.08
Topbp1-201ENSMUST00000035164 Q9DAB9 146 aa8.31□□□□□ -1.08
Topbp1-201ENSMUST00000035164 Cep192E9Q4Y4 2514 aaKnown RBP8.31□□□□□ -1.08
Topbp1-201ENSMUST00000035164 4930442H23RikQ9D5G7 103 aa8.31□□□□□ -1.08
Topbp1-201ENSMUST00000035164 Atp5eP56382 52 aa8.31□□□□□ -1.08
Topbp1-201ENSMUST00000035164 Gm9195A0A140LHT4 2805 aa8.31□□□□□ -1.08
Topbp1-201ENSMUST00000035164 AngP21570 145 aa8.31□□□□□ -1.08
Topbp1-201ENSMUST00000035164 4930470P17RikQ9D542 155 aa8.31□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 85.1 ms