RNA–Protein interactions for RNA: ENSMUST00000030205.13

Ttc39b-201, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

TSL 1 (best) BASIC

Gene Ttc39b, Length 842 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-201ENSMUST00000030205 Gm4744D3Z3S5 154 aa12.72□□□□□ -0.37
Ttc39b-201ENSMUST00000030205 Gm10518F6UQQ9 182 aa12.72□□□□□ -0.37
Ttc39b-201ENSMUST00000030205 TtrP07309 147 aa12.72□□□□□ -0.37
Ttc39b-201ENSMUST00000030205 Q9CR34 168 aa12.72□□□□□ -0.37
Ttc39b-201ENSMUST00000030205 Prss1Q9Z1R9 246 aa12.72□□□□□ -0.37
Ttc39b-201ENSMUST00000030205 Hectd4E9Q2E4 4418 aa12.72□□□□□ -0.37
Ttc39b-201ENSMUST00000030205 P01736 120 aa12.71□□□□□ -0.37
Ttc39b-201ENSMUST00000030205 Btf3l4Q9CQH7 158 aaKnown RBP12.71□□□□□ -0.37
Ttc39b-201ENSMUST00000030205 Esp4A8R0T8 117 aa12.7□□□□□ -0.38
Ttc39b-201ENSMUST00000030205 Twist1P26687 206 aa12.7□□□□□ -0.38
Ttc39b-201ENSMUST00000030205 Rab4aP56371 218 aa12.7□□□□□ -0.38
Ttc39b-201ENSMUST00000030205 Sdhaf1Q3U276 118 aa12.7□□□□□ -0.38
Ttc39b-201ENSMUST00000030205 Polr2kQ63871 58 aa12.7□□□□□ -0.38
Ttc39b-201ENSMUST00000030205 Q9D131 166 aa12.7□□□□□ -0.38
Ttc39b-201ENSMUST00000030205 MobpQ9D2P8 170 aa12.7□□□□□ -0.38
Ttc39b-201ENSMUST00000030205 Tex48Q9DA81 110 aa12.7□□□□□ -0.38
Ttc39b-201ENSMUST00000030205 1810011H11RikE9PVZ2 95 aa12.69□□□□□ -0.38
Ttc39b-201ENSMUST00000030205 PigyP0C1P0 71 aa12.69□□□□□ -0.38
Ttc39b-201ENSMUST00000030205 Gm10735Q3US96 136 aa12.69□□□□□ -0.38
Ttc39b-201ENSMUST00000030205 SycnQ8VCK7 134 aa12.68□□□□□ -0.38
Ttc39b-201ENSMUST00000030205 Trav9n-4A0A075B631 113 aa12.67□□□□□ -0.38
Ttc39b-201ENSMUST00000030205 Gm12169F2Z474 250 aa12.67□□□□□ -0.38
Ttc39b-201ENSMUST00000030205 Nat8f4G5E8L3 226 aa12.67□□□□□ -0.38
Ttc39b-201ENSMUST00000030205 Esp38A8R0X1 80 aa12.66□□□□□ -0.38
Ttc39b-201ENSMUST00000030205 Gm1330D3Z460 184 aa12.66□□□□□ -0.38
Ttc39b-201ENSMUST00000030205 Defa23Q5G866 93 aa12.66□□□□□ -0.38
Ttc39b-201ENSMUST00000030205 Cdc42se2Q8BGH7 84 aa12.66□□□□□ -0.38
Ttc39b-201ENSMUST00000030205 Ndufa6Q9CQZ5 131 aaKnown RBP12.66□□□□□ -0.38
Ttc39b-201ENSMUST00000030205 Pdzd11Q9CZG9 140 aa12.66□□□□□ -0.38
Ttc39b-201ENSMUST00000030205 Cst10Q9JM84 148 aa12.66□□□□□ -0.38
Ttc39b-201ENSMUST00000030205 Trav7-4A0A075B6C1 113 aa12.65□□□□□ -0.38
Ttc39b-201ENSMUST00000030205 Trav7d-4Q5R1H9 113 aa12.65□□□□□ -0.38
Ttc39b-201ENSMUST00000030205 Trav7n-4A0A075B620 113 aa12.64□□□□□ -0.39
Ttc39b-201ENSMUST00000030205 EtdQ80SW5 59 aa12.64□□□□□ -0.39
Ttc39b-201ENSMUST00000030205 Ighv2-9-1A0A075B697 116 aa12.63□□□□□ -0.39
Ttc39b-201ENSMUST00000030205 P01896 185 aa12.63□□□□□ -0.39
Ttc39b-201ENSMUST00000030205 Apoc3P33622 99 aa12.63□□□□□ -0.39
Ttc39b-201ENSMUST00000030205 Rpl23P62830 140 aaKnown RBP12.63□□□□□ -0.39
Ttc39b-201ENSMUST00000030205 Eif4ebp1Q60876 117 aa12.63□□□□□ -0.39
Ttc39b-201ENSMUST00000030205 Olfr509Q8VF20 321 aa12.62□□□□□ -0.39
Ttc39b-201ENSMUST00000030205 Gm10271F6WY25 52 aa12.61□□□□□ -0.39
Ttc39b-201ENSMUST00000030205 Sumo2P61957 95 aaKnown RBP12.61□□□□□ -0.39
Ttc39b-201ENSMUST00000030205 SpinklQ8CEK3 90 aa12.61□□□□□ -0.39
Ttc39b-201ENSMUST00000030205 Ush2AQ2QI47 5193 aa12.6□□□□□ -0.39
Ttc39b-201ENSMUST00000030205 Bak1O08734 209 aa12.6□□□□□ -0.39
Ttc39b-201ENSMUST00000030205 Sprr1aQ62266 144 aa12.6□□□□□ -0.39
Ttc39b-201ENSMUST00000030205 Dppa2Q9CWH0 301 aa12.6□□□□□ -0.39
Ttc39b-201ENSMUST00000030205 Igkv4-79A0A075B5L8 119 aa12.59□□□□□ -0.39
Ttc39b-201ENSMUST00000030205 Gm11444F6QMA6 170 aa12.59□□□□□ -0.39
Ttc39b-201ENSMUST00000030205 PkigO70139 76 aa12.59□□□□□ -0.39
Ttc39b-201ENSMUST00000030205 SstP60041 116 aa12.59□□□□□ -0.39
Ttc39b-201ENSMUST00000030205 Tmem223Q9CQE2 199 aaKnown RBP12.59□□□□□ -0.39
Ttc39b-201ENSMUST00000030205 Borcs7Q9CRC6 105 aa12.59□□□□□ -0.39
Ttc39b-201ENSMUST00000030205 Olfr1118A0A0J9YUE7 307 aa12.58□□□□□ -0.4
Ttc39b-201ENSMUST00000030205 D6Ertd527eA0A0N4SWI3 464 aa12.58□□□□□ -0.4
Ttc39b-201ENSMUST00000030205 Defa27F2Z403 93 aa12.58□□□□□ -0.4
Ttc39b-201ENSMUST00000030205 Gm9789Q8BIG3 52 aa12.58□□□□□ -0.4
Ttc39b-201ENSMUST00000030205 Gm17430F6RSK3 157 aa12.57□□□□□ -0.4
Ttc39b-201ENSMUST00000030205 Q5BN45 167 aa12.57□□□□□ -0.4
Ttc39b-201ENSMUST00000030205 Ndufa4Q62425 82 aaKnown RBP12.57□□□□□ -0.4
Ttc39b-201ENSMUST00000030205 Scgb3a2Q920H1 91 aa12.57□□□□□ -0.4
Ttc39b-201ENSMUST00000030205 Ighv8-2A0A0A6YW58 119 aa12.56□□□□□ -0.4
Ttc39b-201ENSMUST00000030205 Ceacam15A0A0B4J1L0 234 aa12.56□□□□□ -0.4
Ttc39b-201ENSMUST00000030205 Gm12355A2A4X6 163 aa12.56□□□□□ -0.4
Ttc39b-201ENSMUST00000030205 P01791 123 aa12.56□□□□□ -0.4
Ttc39b-201ENSMUST00000030205 Srsf3P84104 164 aaKnown RBP12.56□□□□□ -0.4
Ttc39b-201ENSMUST00000030205 Krtap14O08640 167 aa12.55□□□□□ -0.4
Ttc39b-201ENSMUST00000030205 Mmp23O88676 391 aa12.55□□□□□ -0.4
Ttc39b-201ENSMUST00000030205 P03985 172 aa12.54□□□□□ -0.4
Ttc39b-201ENSMUST00000030205 A530084C06RikQ3UTW2 186 aa12.54□□□□□ -0.4
Ttc39b-201ENSMUST00000030205 Adm2Q7TNK8 150 aa12.54□□□□□ -0.4
Ttc39b-201ENSMUST00000030205 4932415D10RikA0A1W2P6U8 4986 aa12.53□□□□□ -0.4
Ttc39b-201ENSMUST00000030205 Ighv1-72P01751 139 aa12.53□□□□□ -0.4
Ttc39b-201ENSMUST00000030205 P18527 97 aa12.53□□□□□ -0.4
Ttc39b-201ENSMUST00000030205 Rpl32P62911 135 aaKnown RBP12.53□□□□□ -0.4
Ttc39b-201ENSMUST00000030205 Q8CF25 301 aa12.53□□□□□ -0.4
Ttc39b-201ENSMUST00000030205 Atxn7l1Q9CZ05 146 aa12.53□□□□□ -0.4
Ttc39b-201ENSMUST00000030205 B230359F08RikA0A0B4J1K3 109 aa12.52□□□□□ -0.41
Ttc39b-201ENSMUST00000030205 A330070K13RikQ8CA53 115 aa12.52□□□□□ -0.41
Ttc39b-201ENSMUST00000030205 Olfr869E9PX82 323 aa12.51□□□□□ -0.41
Ttc39b-201ENSMUST00000030205 Tnfsf18Q7TS55 173 aa12.51□□□□□ -0.41
Ttc39b-201ENSMUST00000030205 Commd7Q8BG94 200 aa12.51□□□□□ -0.41
Ttc39b-201ENSMUST00000030205 Vsig4F6TUL9 280 aa12.5□□□□□ -0.41
Ttc39b-201ENSMUST00000030205 SeboxP70368 190 aa12.5□□□□□ -0.41
Ttc39b-201ENSMUST00000030205 Gm9747Q810H1 104 aa12.5□□□□□ -0.41
Ttc39b-201ENSMUST00000030205 Sprr4Q8CGN8 76 aa12.5□□□□□ -0.41
Ttc39b-201ENSMUST00000030205 Olfr984Q8VFN1 314 aa12.5□□□□□ -0.41
Ttc39b-201ENSMUST00000030205 A730009L09RikA0A1B0GS82 72 aa12.49□□□□□ -0.41
Ttc39b-201ENSMUST00000030205 Tfpi2O35536 230 aa12.49□□□□□ -0.41
Ttc39b-201ENSMUST00000030205 4930596D02RikQ3V0H9 216 aa12.49□□□□□ -0.41
Ttc39b-201ENSMUST00000030205 Smco4Q9JIS3 59 aa12.49□□□□□ -0.41
Ttc39b-201ENSMUST00000030205 Rpl39P62892 51 aa12.48□□□□□ -0.41
Ttc39b-201ENSMUST00000030205 Fam19a4Q7TPG5 135 aa12.48□□□□□ -0.41
Ttc39b-201ENSMUST00000030205 Defb9Q8R2I6 67 aa12.48□□□□□ -0.41
Ttc39b-201ENSMUST00000030205 Fgf6P21658 208 aa12.47□□□□□ -0.41
Ttc39b-201ENSMUST00000030205 Mrpl55Q9CZ83 127 aa12.47□□□□□ -0.41
Ttc39b-201ENSMUST00000030205 Trav13d-4A0A0G2JFX3 110 aa12.46□□□□□ -0.41
Ttc39b-201ENSMUST00000030205 Tmem140Q8BGY5 185 aa12.46□□□□□ -0.41
Ttc39b-201ENSMUST00000030205 4930546C10RikE9Q4Y3 121 aa12.45□□□□□ -0.42
Ttc39b-201ENSMUST00000030205 P01819 144 aa12.45□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 2005.1 ms