RNA–Protein interactions for RNA: ENSMUST00000023123.14

Col2a1-201, Transcript of Collagen alpha-1(II) chain, mousemouse

TSL 1 (best) BASIC

Gene Col2a1, Length 5,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1-201ENSMUST00000023123 Naa38Q9D2U5 125 aa11.47□□□□□ -0.57
Col2a1-201ENSMUST00000023123 P01745 121 aa11.47□□□□□ -0.57
Col2a1-201ENSMUST00000023123 Tcf20Q9EPQ8 1987 aa11.47□□□□□ -0.57
Col2a1-201ENSMUST00000023123 Gm17577J3QNF7 156 aa11.47□□□□□ -0.57
Col2a1-201ENSMUST00000023123 Vpreb1P13372 142 aa11.47□□□□□ -0.57
Col2a1-201ENSMUST00000023123 Gm1968Q3T9I3 115 aa11.47□□□□□ -0.57
Col2a1-201ENSMUST00000023123 Dopey1Q8BL99 2399 aa11.46□□□□□ -0.57
Col2a1-201ENSMUST00000023123 Spink4O35679 86 aa11.46□□□□□ -0.57
Col2a1-201ENSMUST00000023123 Spata25Q9DA57 226 aa11.46□□□□□ -0.57
Col2a1-201ENSMUST00000023123 Fhl1P97447 280 aaKnown RBP11.46□□□□□ -0.58
Col2a1-201ENSMUST00000023123 B9d2Q3UK10 175 aa11.46□□□□□ -0.58
Col2a1-201ENSMUST00000023123 Igkv8-18A0A0B4J1J3 123 aa11.45□□□□□ -0.58
Col2a1-201ENSMUST00000023123 P01820 115 aa11.45□□□□□ -0.58
Col2a1-201ENSMUST00000023123 HelzQ6DFV5 1964 aaKnown RBP11.45□□□□□ -0.58
Col2a1-201ENSMUST00000023123 Sprr3O09116 238 aa11.45□□□□□ -0.58
Col2a1-201ENSMUST00000023123 Vpreb3D3Z6J4 130 aa11.44□□□□□ -0.58
Col2a1-201ENSMUST00000023123 Gm12689Q8BQU9 117 aa11.44□□□□□ -0.58
Col2a1-201ENSMUST00000023123 Ighv2-6-8A0A0A6YWY9 116 aa11.44□□□□□ -0.58
Col2a1-201ENSMUST00000023123 Defb18Q30KP5 85 aa11.44□□□□□ -0.58
Col2a1-201ENSMUST00000023123 Gphb5Q812B2 130 aa11.44□□□□□ -0.58
Col2a1-201ENSMUST00000023123 Cox8cA6H666 72 aa11.44□□□□□ -0.58
Col2a1-201ENSMUST00000023123 Tcl1b3P56842 122 aa11.43□□□□□ -0.58
Col2a1-201ENSMUST00000023123 Trav9n-4A0A075B631 113 aa11.43□□□□□ -0.58
Col2a1-201ENSMUST00000023123 Gm3618D3Z4P5 127 aa11.43□□□□□ -0.58
Col2a1-201ENSMUST00000023123 Golgb1E9PVZ8 3238 aa11.43□□□□□ -0.58
Col2a1-201ENSMUST00000023123 Ube2d4D3YUH6 135 aa11.43□□□□□ -0.58
Col2a1-201ENSMUST00000023123 SvipQ3UZP4 77 aa11.43□□□□□ -0.58
Col2a1-201ENSMUST00000023123 C1qcQ02105 246 aa11.42□□□□□ -0.58
Col2a1-201ENSMUST00000023123 Tcte2E9PY37 120 aa11.42□□□□□ -0.58
Col2a1-201ENSMUST00000023123 Fgfbp3Q1HCM0 245 aa11.42□□□□□ -0.58
Col2a1-201ENSMUST00000023123 A130051J06RikQ8CAU1 227 aa11.42□□□□□ -0.58
Col2a1-201ENSMUST00000023123 Smim1P0C8K7 78 aa11.42□□□□□ -0.58
Col2a1-201ENSMUST00000023123 Rpl18aP62717 176 aaKnown RBP11.42□□□□□ -0.58
Col2a1-201ENSMUST00000023123 Ly6hQ9WUC3 139 aa11.42□□□□□ -0.58
Col2a1-201ENSMUST00000023123 Pla2g2dQ9WVF6 144 aa11.42□□□□□ -0.58
Col2a1-201ENSMUST00000023123 Sox16Q62247 57 aa11.42□□□□□ -0.58
Col2a1-201ENSMUST00000023123 Klk9Q32M27 251 aa11.41□□□□□ -0.58
Col2a1-201ENSMUST00000023123 Tfpi2O35536 230 aa11.41□□□□□ -0.58
Col2a1-201ENSMUST00000023123 Rnase1P00683 149 aa11.41□□□□□ -0.58
Col2a1-201ENSMUST00000023123 Q9D8Q6 235 aa11.4□□□□□ -0.58
Col2a1-201ENSMUST00000023123 Spg11Q3UHA3 2430 aa11.4□□□□□ -0.58
Col2a1-201ENSMUST00000023123 Sorl1O88307 2215 aaKnown RBP11.4□□□□□ -0.58
Col2a1-201ENSMUST00000023123 Ighv2-3A0A075B696 115 aa11.4□□□□□ -0.59
Col2a1-201ENSMUST00000023123 Ebi3O35228 228 aa11.39□□□□□ -0.59
Col2a1-201ENSMUST00000023123 Pcnx2Q5DU28 2122 aa11.39□□□□□ -0.59
Col2a1-201ENSMUST00000023123 Gm10735Q3US96 136 aa11.39□□□□□ -0.59
Col2a1-201ENSMUST00000023123 Gm10401E9Q3K6 71 aa11.39□□□□□ -0.59
Col2a1-201ENSMUST00000023123 Reg3bP35230 175 aa11.39□□□□□ -0.59
Col2a1-201ENSMUST00000023123 Lmo4P61969 165 aa11.39□□□□□ -0.59
Col2a1-201ENSMUST00000023123 Ufsp1Q9CZP0 217 aa11.39□□□□□ -0.59
Col2a1-201ENSMUST00000023123 EnhoQ8K1D8 76 aa11.38□□□□□ -0.59
Col2a1-201ENSMUST00000023123 TshbP12656 138 aa11.38□□□□□ -0.59
Col2a1-201ENSMUST00000023123 Serp2Q6TAW2 65 aa11.38□□□□□ -0.59
Col2a1-201ENSMUST00000023123 DysfQ9ESD7 2090 aa11.38□□□□□ -0.59
Col2a1-201ENSMUST00000023123 Pla2g2eQ9QUL3 142 aa11.37□□□□□ -0.59
Col2a1-201ENSMUST00000023123 Pcnx3Q8VI59 2028 aa11.37□□□□□ -0.59
Col2a1-201ENSMUST00000023123 Igkv3-5A0A140T8M6 119 aa11.37□□□□□ -0.59
Col2a1-201ENSMUST00000023123 Sh2d1aO88890 126 aa11.37□□□□□ -0.59
Col2a1-201ENSMUST00000023123 Psmb8P28063 276 aa11.37□□□□□ -0.59
Col2a1-201ENSMUST00000023123 Pla2g2aP31482 146 aa11.36□□□□□ -0.59
Col2a1-201ENSMUST00000023123 Nup210Q9QY81 1886 aaKnown RBP11.36□□□□□ -0.59
Col2a1-201ENSMUST00000023123 Gm12057A0A087WR21 115 aa11.36□□□□□ -0.59
Col2a1-201ENSMUST00000023123 CnfnQ6PCW6 111 aa11.36□□□□□ -0.59
Col2a1-201ENSMUST00000023123 E130116L18RikQ8BMV6 101 aa11.36□□□□□ -0.59
Col2a1-201ENSMUST00000023123 Gm9913Q8BQQ2 135 aa11.36□□□□□ -0.59
Col2a1-201ENSMUST00000023123 Higd2aQ9CQJ1 106 aa11.36□□□□□ -0.59
Col2a1-201ENSMUST00000023123 CenpwQ3URR0 86 aa11.35□□□□□ -0.59
Col2a1-201ENSMUST00000023123 Ube2aQ9Z255 152 aa11.35□□□□□ -0.59
Col2a1-201ENSMUST00000023123 Zfyve26Q5DU37 2529 aa11.35□□□□□ -0.59
Col2a1-201ENSMUST00000023123 Prrc2aQ7TSC1 2158 aaKnown RBP11.35□□□□□ -0.59
Col2a1-201ENSMUST00000023123 Prr15lQ8JZM2 100 aa11.34□□□□□ -0.59
Col2a1-201ENSMUST00000023123 Ighv1-66A0A075B5X5 117 aa11.34□□□□□ -0.59
Col2a1-201ENSMUST00000023123 Dido1Q8C9B9 2256 aaKnown RBP11.34□□□□□ -0.59
Col2a1-201ENSMUST00000023123 Ighv3-3A0A0A6YWL2 116 aa11.34□□□□□ -0.59
Col2a1-201ENSMUST00000023123 Gm17521F6QAC8 156 aa11.34□□□□□ -0.59
Col2a1-201ENSMUST00000023123 Polr2kQ63871 58 aa11.34□□□□□ -0.59
Col2a1-201ENSMUST00000023123 Notch4P31695 1964 aa11.34□□□□□ -0.59
Col2a1-201ENSMUST00000023123 9530003J23RikQ8BM26 151 aa11.33□□□□□ -0.59
Col2a1-201ENSMUST00000023123 Rnf152Q8BG47 203 aa11.33□□□□□ -0.6
Col2a1-201ENSMUST00000023123 Rif1Q6PR54 2419 aaKnown RBP11.33□□□□□ -0.6
Col2a1-201ENSMUST00000023123 Ighv10-1A0A0B4J1J6 119 aa11.33□□□□□ -0.6
Col2a1-201ENSMUST00000023123 SptssbQ925E8 76 aa11.33□□□□□ -0.6
Col2a1-201ENSMUST00000023123 Ighv1-62-1A0A075B5U3 116 aa11.32□□□□□ -0.6
Col2a1-201ENSMUST00000023123 Ly6gP35461 111 aa11.32□□□□□ -0.6
Col2a1-201ENSMUST00000023123 P01823 113 aa11.32□□□□□ -0.6
Col2a1-201ENSMUST00000023123 1700012A03RikQ9DAF1 130 aa11.32□□□□□ -0.6
Col2a1-201ENSMUST00000023123 AcacbE9Q4Z2 2448 aa11.31□□□□□ -0.6
Col2a1-201ENSMUST00000023123 Gm16223Q8CBM3 117 aa11.31□□□□□ -0.6
Col2a1-201ENSMUST00000023123 AgrnA2ASQ1 1950 aa11.31□□□□□ -0.6
Col2a1-201ENSMUST00000023123 Igkv3-10A0A0G2JGN0 119 aa11.31□□□□□ -0.6
Col2a1-201ENSMUST00000023123 Edn2P22389 175 aa11.31□□□□□ -0.6
Col2a1-201ENSMUST00000023123 AcanQ61282 2132 aaKnown RBP11.31□□□□□ -0.6
Col2a1-201ENSMUST00000023123 P06320 134 aa11.3□□□□□ -0.6
Col2a1-201ENSMUST00000023123 Gm10577Q3UDV9 132 aa11.3□□□□□ -0.6
Col2a1-201ENSMUST00000023123 B430305J03RikQ8BQQ8 176 aa11.3□□□□□ -0.6
Col2a1-201ENSMUST00000023123 NbasE9Q411 2356 aa11.3□□□□□ -0.6
Col2a1-201ENSMUST00000023123 9430015G10RikA2ASP7 199 aa11.29□□□□□ -0.6
Col2a1-201ENSMUST00000023123 Gm10322F7D7I4 111 aa11.29□□□□□ -0.6
Col2a1-201ENSMUST00000023123 Alms1Q8K4E0 3251 aa11.29□□□□□ -0.6
Col2a1-201ENSMUST00000023123 Gm9805F6YK59 57 aa11.28□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 47.4 ms