RNA–Protein interactions for RNA: ENSMUST00000208058.1

Pcf11-204, Transcript of Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

TSL 5 BASIC

Gene Pcf11, Length 461 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11-204ENSMUST00000208058 Gm14325A2AW67 498 aa14.03□□□□□ -0.16
Pcf11-204ENSMUST00000208058 Gm1330D3Z460 184 aa14.03□□□□□ -0.16
Pcf11-204ENSMUST00000208058 Defa16P50714 93 aa14.03□□□□□ -0.16
Pcf11-204ENSMUST00000208058 Dnhd1D3Z2X2 4750 aa14.02□□□□□ -0.16
Pcf11-204ENSMUST00000208058 Rnf212F6TQD1 307 aa14.02□□□□□ -0.17
Pcf11-204ENSMUST00000208058 CrygaP04345 174 aa14.02□□□□□ -0.17
Pcf11-204ENSMUST00000208058 Gm5629P06327 117 aa14.02□□□□□ -0.17
Pcf11-204ENSMUST00000208058 Odf3l2Q3TZ65 277 aa14.02□□□□□ -0.17
Pcf11-204ENSMUST00000208058 Gm10837Q3UTT8 145 aa14.02□□□□□ -0.17
Pcf11-204ENSMUST00000208058 Psors1c2Q80ZC9 134 aa14.02□□□□□ -0.17
Pcf11-204ENSMUST00000208058 Commd7Q8BG94 200 aa14.02□□□□□ -0.17
Pcf11-204ENSMUST00000208058 Trav14n-3A0A075B645 120 aa14.01□□□□□ -0.17
Pcf11-204ENSMUST00000208058 OstcQ78XF5 149 aa14.01□□□□□ -0.17
Pcf11-204ENSMUST00000208058 AamdcQ8R0P4 122 aa14.01□□□□□ -0.17
Pcf11-204ENSMUST00000208058 Tex261Q62302 196 aa14□□□□□ -0.17
Pcf11-204ENSMUST00000208058 Prss3Q792Z0 246 aaKnown RBP14□□□□□ -0.17
Pcf11-204ENSMUST00000208058 Snai3Q9QY31 287 aa14□□□□□ -0.17
Pcf11-204ENSMUST00000208058 Pkhd1l1Q80ZA4 4249 aa14□□□□□ -0.17
Pcf11-204ENSMUST00000208058 Trav14d-1A0A075B6B1 121 aa13.99□□□□□ -0.17
Pcf11-204ENSMUST00000208058 Prh1P05142 261 aa13.99□□□□□ -0.17
Pcf11-204ENSMUST00000208058 Atp5lQ9CPQ8 103 aa13.99□□□□□ -0.17
Pcf11-204ENSMUST00000208058 Nat8b-psE0CYC6 232 aa13.98□□□□□ -0.17
Pcf11-204ENSMUST00000208058 Gm20517G3UVU6 152 aa13.98□□□□□ -0.17
Pcf11-204ENSMUST00000208058 Cited1P97769 203 aa13.98□□□□□ -0.17
Pcf11-204ENSMUST00000208058 EtdQ80SW5 59 aa13.98□□□□□ -0.17
Pcf11-204ENSMUST00000208058 Gm18596A0A1W2P860 280 aa13.97□□□□□ -0.17
Pcf11-204ENSMUST00000208058 Mycbp2Q7TPH6 4711 aa13.97□□□□□ -0.17
Pcf11-204ENSMUST00000208058 1700015F17RikD3YUK8 150 aa13.96□□□□□ -0.17
Pcf11-204ENSMUST00000208058 Omt2bD3YX29 119 aa13.96□□□□□ -0.17
Pcf11-204ENSMUST00000208058 Gpx7Q99LJ6 186 aa13.96□□□□□ -0.17
Pcf11-204ENSMUST00000208058 P01793 123 aa13.95□□□□□ -0.18
Pcf11-204ENSMUST00000208058 NpsP0C0P8 89 aa13.95□□□□□ -0.18
Pcf11-204ENSMUST00000208058 Igll1P20764 209 aa13.95□□□□□ -0.18
Pcf11-204ENSMUST00000208058 4930556J24RikQ9D4U7 146 aa13.95□□□□□ -0.18
Pcf11-204ENSMUST00000208058 Krtap11-1E9Q2E9 183 aa13.94□□□□□ -0.18
Pcf11-204ENSMUST00000208058 PigyP0C1P0 71 aa13.94□□□□□ -0.18
Pcf11-204ENSMUST00000208058 Twist1P26687 206 aa13.94□□□□□ -0.18
Pcf11-204ENSMUST00000208058 Rpl23P62830 140 aaKnown RBP13.94□□□□□ -0.18
Pcf11-204ENSMUST00000208058 Tmed6Q9CQG0 239 aa13.94□□□□□ -0.18
Pcf11-204ENSMUST00000208058 Ndufa6Q9CQZ5 131 aaKnown RBP13.94□□□□□ -0.18
Pcf11-204ENSMUST00000208058 Q9CR34 168 aa13.94□□□□□ -0.18
Pcf11-204ENSMUST00000208058 EsdQ9R0P3 282 aa13.94□□□□□ -0.18
Pcf11-204ENSMUST00000208058 Igkv3-12A0A140T8P0 119 aa13.93□□□□□ -0.18
Pcf11-204ENSMUST00000208058 Gm12355A2A4X6 163 aa13.93□□□□□ -0.18
Pcf11-204ENSMUST00000208058 OdaphJ3QNT8 126 aa13.93□□□□□ -0.18
Pcf11-204ENSMUST00000208058 Srsf3P84104 164 aaKnown RBP13.93□□□□□ -0.18
Pcf11-204ENSMUST00000208058 Tcrg-C1A0A075B5Z0 172 aa13.92□□□□□ -0.18
Pcf11-204ENSMUST00000208058 Trav7-4A0A075B6C1 113 aa13.92□□□□□ -0.18
Pcf11-204ENSMUST00000208058 Zfp951A0A087WRH0 451 aa13.92□□□□□ -0.18
Pcf11-204ENSMUST00000208058 Tcrg-C3L7N479 172 aa13.92□□□□□ -0.18
Pcf11-204ENSMUST00000208058 Trav7d-4Q5R1H9 113 aa13.92□□□□□ -0.18
Pcf11-204ENSMUST00000208058 March3Q8BRX9 218 aa13.92□□□□□ -0.18
Pcf11-204ENSMUST00000208058 Trav7n-4A0A075B620 113 aa13.91□□□□□ -0.18
Pcf11-204ENSMUST00000208058 1810011H11RikE9PVZ2 95 aa13.91□□□□□ -0.18
Pcf11-204ENSMUST00000208058 Ighv8-2A0A0A6YW58 119 aa13.9□□□□□ -0.18
Pcf11-204ENSMUST00000208058 Igkv4-78A0A0A6YYE5 119 aa13.9□□□□□ -0.18
Pcf11-204ENSMUST00000208058 Gm11213A0A1B0GR83 88 aa13.9□□□□□ -0.18
Pcf11-204ENSMUST00000208058 CnbpP53996 178 aaKnown RBP13.9□□□□□ -0.18
Pcf11-204ENSMUST00000208058 Plac8l1Q08EJ0 177 aa13.9□□□□□ -0.18
Pcf11-204ENSMUST00000208058 Lhfpl3Q9CTN8 222 aa13.9□□□□□ -0.18
Pcf11-204ENSMUST00000208058 1700012A03RikQ9DAF1 130 aa13.9□□□□□ -0.18
Pcf11-204ENSMUST00000208058 Ighv1-61P01749 117 aa13.89□□□□□ -0.19
Pcf11-204ENSMUST00000208058 Scgb3a2Q920H1 91 aa13.89□□□□□ -0.19
Pcf11-204ENSMUST00000208058 Tm4sf20Q9CQY8 226 aa13.89□□□□□ -0.19
Pcf11-204ENSMUST00000208058 Slc25a20Q9Z2Z6 301 aaKnown RBP13.89□□□□□ -0.19
Pcf11-204ENSMUST00000208058 Fat3Q8BNA6 4555 aa13.89□□□□□ -0.19
Pcf11-204ENSMUST00000208058 Umad1E0CX23 159 aa13.88□□□□□ -0.19
Pcf11-204ENSMUST00000208058 Rab4aP56371 218 aa13.88□□□□□ -0.19
Pcf11-204ENSMUST00000208058 Tmed3Q78IS1 221 aa13.88□□□□□ -0.19
Pcf11-204ENSMUST00000208058 Gm16223Q8CBM3 117 aa13.88□□□□□ -0.19
Pcf11-204ENSMUST00000208058 Q9D131 166 aa13.87□□□□□ -0.19
Pcf11-204ENSMUST00000208058 Atg101Q9D8Z6 218 aa13.87□□□□□ -0.19
Pcf11-204ENSMUST00000208058 1600014C23RikQ9DAX4 101 aa13.87□□□□□ -0.19
Pcf11-204ENSMUST00000208058 Cfap126Q6P8X9 189 aa13.86□□□□□ -0.19
Pcf11-204ENSMUST00000208058 Pex7P97865 318 aa13.85□□□□□ -0.19
Pcf11-204ENSMUST00000208058 Polr2kQ63871 58 aa13.85□□□□□ -0.19
Pcf11-204ENSMUST00000208058 Gm9944Q8C559 102 aa13.85□□□□□ -0.19
Pcf11-204ENSMUST00000208058 Gm5617Q91VN2 117 aa13.85□□□□□ -0.19
Pcf11-204ENSMUST00000208058 Ighv2-9A0A075B5Q5 116 aa13.84□□□□□ -0.19
Pcf11-204ENSMUST00000208058 Esp38A8R0X1 80 aa13.84□□□□□ -0.19
Pcf11-204ENSMUST00000208058 Gm28044L7N1X0 119 aa13.84□□□□□ -0.19
Pcf11-204ENSMUST00000208058 TtrP07309 147 aa13.84□□□□□ -0.19
Pcf11-204ENSMUST00000208058 Sdhaf1Q3U276 118 aa13.84□□□□□ -0.19
Pcf11-204ENSMUST00000208058 Med28Q920D3 178 aa13.84□□□□□ -0.19
Pcf11-204ENSMUST00000208058 Herc1E9PZP8 4859 aa13.83□□□□□ -0.2
Pcf11-204ENSMUST00000208058 Krtap19-5O08632 62 aa13.83□□□□□ -0.2
Pcf11-204ENSMUST00000208058 P01736 120 aa13.83□□□□□ -0.2
Pcf11-204ENSMUST00000208058 Cd33Q63994 403 aa13.83□□□□□ -0.2
Pcf11-204ENSMUST00000208058 Tex48Q9DA81 110 aa13.83□□□□□ -0.2
Pcf11-204ENSMUST00000208058 Esp3J3QN49 87 aa13.82□□□□□ -0.2
Pcf11-204ENSMUST00000208058 Gm9242J3QNY1 357 aa13.82□□□□□ -0.2
Pcf11-204ENSMUST00000208058 Adcyap1O70176 175 aa13.82□□□□□ -0.2
Pcf11-204ENSMUST00000208058 Hsbp1Q9CQZ1 76 aa13.81□□□□□ -0.2
Pcf11-204ENSMUST00000208058 Trav7-6A0A075B640 112 aa13.8□□□□□ -0.2
Pcf11-204ENSMUST00000208058 Gm4744D3Z3S5 154 aa13.8□□□□□ -0.2
Pcf11-204ENSMUST00000208058 Trav3-3Q5R1C3 114 aa13.8□□□□□ -0.2
Pcf11-204ENSMUST00000208058 Borcs7Q9CRC6 105 aa13.8□□□□□ -0.2
Pcf11-204ENSMUST00000208058 Nat8f4G5E8L3 226 aa13.79□□□□□ -0.2
Pcf11-204ENSMUST00000208058 Srsf9Q9D0B0 222 aaKnown RBP13.79□□□□□ -0.2
Pcf11-204ENSMUST00000208058 Cst10Q9JM84 148 aa13.79□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 192.2 ms