RNA–Protein interactions for RNA: ENSMUST00000100026.9

Ccdc50-203, Transcript of Coiled-coil domain-containing protein 50, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc50, Length 7,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-203ENSMUST00000100026 Sec16aA2AIX1 2377 aa11.57□□□□□ -0.56
Ccdc50-203ENSMUST00000100026 Gm9958Q8C9U4 106 aa11.57□□□□□ -0.56
Ccdc50-203ENSMUST00000100026 Cryba4Q9JJV0 196 aa11.57□□□□□ -0.56
Ccdc50-203ENSMUST00000100026 Trbv16A0A0B4J1H3 115 aa11.56□□□□□ -0.56
Ccdc50-203ENSMUST00000100026 Vsig4F6TUL9 280 aa11.56□□□□□ -0.56
Ccdc50-203ENSMUST00000100026 Trav13n-2A0A0G2JF93 110 aa11.56□□□□□ -0.56
Ccdc50-203ENSMUST00000100026 Nupr2Q497P3 102 aa11.56□□□□□ -0.56
Ccdc50-203ENSMUST00000100026 Igkv2-109A0A075B5K6 120 aa11.55□□□□□ -0.56
Ccdc50-203ENSMUST00000100026 Tcte2E9PY37 120 aa11.55□□□□□ -0.56
Ccdc50-203ENSMUST00000100026 F5O88783 2183 aa11.55□□□□□ -0.56
Ccdc50-203ENSMUST00000100026 BB014433Q8C5R5 389 aa11.55□□□□□ -0.56
Ccdc50-203ENSMUST00000100026 Plscr4P58196 326 aa11.55□□□□□ -0.56
Ccdc50-203ENSMUST00000100026 Fxyd5P97808 178 aa11.55□□□□□ -0.56
Ccdc50-203ENSMUST00000100026 Greb1Q3UHK3 1954 aa11.54□□□□□ -0.56
Ccdc50-203ENSMUST00000100026 Gm12353A2AGJ4 60 aa11.54□□□□□ -0.56
Ccdc50-203ENSMUST00000100026 Odf3l1Q810P2 275 aa11.54□□□□□ -0.56
Ccdc50-203ENSMUST00000100026 Mrpl35Q9CQL6 188 aa11.54□□□□□ -0.56
Ccdc50-203ENSMUST00000100026 Ighv1-63A0A075B5X2 117 aa11.54□□□□□ -0.56
Ccdc50-203ENSMUST00000100026 Gm45213A0A0U1RNZ6 101 aa11.54□□□□□ -0.56
Ccdc50-203ENSMUST00000100026 Tmem243B2RVB9 118 aa11.54□□□□□ -0.56
Ccdc50-203ENSMUST00000100026 Fam222aQ6PGH4 453 aa11.54□□□□□ -0.56
Ccdc50-203ENSMUST00000100026 Ep300B2RWS6 2412 aa11.53□□□□□ -0.56
Ccdc50-203ENSMUST00000100026 TectaO08523 2155 aa11.53□□□□□ -0.56
Ccdc50-203ENSMUST00000100026 Cd33Q63994 403 aa11.53□□□□□ -0.56
Ccdc50-203ENSMUST00000100026 Mrpl55Q9CZ83 127 aa11.53□□□□□ -0.56
Ccdc50-203ENSMUST00000100026 Trav7-6A0A075B640 112 aa11.53□□□□□ -0.56
Ccdc50-203ENSMUST00000100026 Wfdc15aQ8BH89 80 aa11.53□□□□□ -0.56
Ccdc50-203ENSMUST00000100026 Wdr90Q6ZPG2 1874 aa11.53□□□□□ -0.56
Ccdc50-203ENSMUST00000100026 Rbm3O89086 153 aaKnown RBP11.53□□□□□ -0.56
Ccdc50-203ENSMUST00000100026 Arhgef17Q80U35 2057 aa11.53□□□□□ -0.56
Ccdc50-203ENSMUST00000100026 Ufsp1Q9CZP0 217 aa11.52□□□□□ -0.56
Ccdc50-203ENSMUST00000100026 Parp4E9PYK3 1969 aa11.52□□□□□ -0.56
Ccdc50-203ENSMUST00000100026 Wnk1P83741 2377 aa11.52□□□□□ -0.57
Ccdc50-203ENSMUST00000100026 Crip1P63254 77 aa11.52□□□□□ -0.57
Ccdc50-203ENSMUST00000100026 SptssbQ925E8 76 aa11.52□□□□□ -0.57
Ccdc50-203ENSMUST00000100026 C920008G01RikA0A0B4J1N1 112 aa11.52□□□□□ -0.57
Ccdc50-203ENSMUST00000100026 Rbmy1bQ60990 380 aa11.52□□□□□ -0.57
Ccdc50-203ENSMUST00000100026 Gm20726G3UX18 150 aa11.52□□□□□ -0.57
Ccdc50-203ENSMUST00000100026 P01747 120 aa11.51□□□□□ -0.57
Ccdc50-203ENSMUST00000100026 Pla2g2cP48076 150 aa11.51□□□□□ -0.57
Ccdc50-203ENSMUST00000100026 Acyp1P56376 99 aa11.51□□□□□ -0.57
Ccdc50-203ENSMUST00000100026 Defb2P82020 71 aa11.51□□□□□ -0.57
Ccdc50-203ENSMUST00000100026 Smrp1Q2MH31 260 aa11.51□□□□□ -0.57
Ccdc50-203ENSMUST00000100026 E130116L18RikQ8BMV6 101 aa11.51□□□□□ -0.57
Ccdc50-203ENSMUST00000100026 Trav12-3A0A075B648 115 aa11.51□□□□□ -0.57
Ccdc50-203ENSMUST00000100026 P04944 107 aa11.51□□□□□ -0.57
Ccdc50-203ENSMUST00000100026 1110002E22RikE0CYV9 1786 aa11.51□□□□□ -0.57
Ccdc50-203ENSMUST00000100026 5730596B20RikQ8BQ08 205 aa11.5□□□□□ -0.57
Ccdc50-203ENSMUST00000100026 Ccl25O35903 144 aa11.5□□□□□ -0.57
Ccdc50-203ENSMUST00000100026 Defb12Q8K4N3 78 aa11.5□□□□□ -0.57
Ccdc50-203ENSMUST00000100026 Gm12057A0A087WR21 115 aa11.5□□□□□ -0.57
Ccdc50-203ENSMUST00000100026 Ighv1-5A0A0A6YWG2 117 aa11.5□□□□□ -0.57
Ccdc50-203ENSMUST00000100026 Q9D8Q6 235 aa11.5□□□□□ -0.57
Ccdc50-203ENSMUST00000100026 Trav4-3A0A0B4J1K1 110 aa11.5□□□□□ -0.57
Ccdc50-203ENSMUST00000100026 Ly6gP35461 111 aa11.5□□□□□ -0.57
Ccdc50-203ENSMUST00000100026 Defb13Q8R2I4 64 aa11.5□□□□□ -0.57
Ccdc50-203ENSMUST00000100026 Defb10Q8R2I8 73 aa11.5□□□□□ -0.57
Ccdc50-203ENSMUST00000100026 P06328 117 aa11.5□□□□□ -0.57
Ccdc50-203ENSMUST00000100026 Nup210Q9QY81 1886 aaKnown RBP11.49□□□□□ -0.57
Ccdc50-203ENSMUST00000100026 Ighv1-85A0A075B5Y6 117 aa11.49□□□□□ -0.57
Ccdc50-203ENSMUST00000100026 IgipA0A1B0GR74 53 aa11.49□□□□□ -0.57
Ccdc50-203ENSMUST00000100026 Ighv1-62-2A0A0A6YXZ4 119 aa11.49□□□□□ -0.57
Ccdc50-203ENSMUST00000100026 AW146154Q3TPQ7 468 aa11.49□□□□□ -0.57
Ccdc50-203ENSMUST00000100026 Shisa2Q8QZV2 295 aa11.49□□□□□ -0.57
Ccdc50-203ENSMUST00000100026 Trav4d-3A0A075B625 110 aa11.49□□□□□ -0.57
Ccdc50-203ENSMUST00000100026 TncQ80YX1 2110 aa11.49□□□□□ -0.57
Ccdc50-203ENSMUST00000100026 AtrxQ61687 2476 aaKnown RBP11.48□□□□□ -0.57
Ccdc50-203ENSMUST00000100026 Igkv1-35A0A0G2JDE5 120 aa11.48□□□□□ -0.57
Ccdc50-203ENSMUST00000100026 Ube2d1P61080 147 aaKnown RBP11.48□□□□□ -0.57
Ccdc50-203ENSMUST00000100026 Notch4P31695 1964 aa11.48□□□□□ -0.57
Ccdc50-203ENSMUST00000100026 Ighv1-62-1A0A075B5U3 116 aa11.48□□□□□ -0.57
Ccdc50-203ENSMUST00000100026 Vpreb3D3Z6J4 130 aa11.48□□□□□ -0.57
Ccdc50-203ENSMUST00000100026 Gm17521F6QAC8 156 aa11.48□□□□□ -0.57
Ccdc50-203ENSMUST00000100026 Wisp2Q9Z0G4 251 aa11.48□□□□□ -0.57
Ccdc50-203ENSMUST00000100026 Pla2g1bQ9Z0Y2 146 aa11.48□□□□□ -0.57
Ccdc50-203ENSMUST00000100026 SonQ9QX47 2444 aaKnown RBP11.47□□□□□ -0.57
Ccdc50-203ENSMUST00000100026 PkdrejQ9Z0T6 2126 aa11.47□□□□□ -0.57
Ccdc50-203ENSMUST00000100026 Tcl1b3P56842 122 aa11.47□□□□□ -0.57
Ccdc50-203ENSMUST00000100026 Hrct1Q9D6B9 109 aa11.47□□□□□ -0.57
Ccdc50-203ENSMUST00000100026 Edn2P22389 175 aa11.47□□□□□ -0.57
Ccdc50-203ENSMUST00000100026 Clec4b2Q67DU8 208 aa11.46□□□□□ -0.57
Ccdc50-203ENSMUST00000100026 Fam19a5Q91WE9 132 aa11.46□□□□□ -0.57
Ccdc50-203ENSMUST00000100026 Rspo3Q2TJ95 277 aa11.46□□□□□ -0.57
Ccdc50-203ENSMUST00000100026 Naa38Q9D2U5 125 aa11.46□□□□□ -0.57
Ccdc50-203ENSMUST00000100026 Spink4O35679 86 aa11.46□□□□□ -0.58
Ccdc50-203ENSMUST00000100026 Ighv3-3A0A0A6YWL2 116 aa11.45□□□□□ -0.58
Ccdc50-203ENSMUST00000100026 AngP21570 145 aa11.45□□□□□ -0.58
Ccdc50-203ENSMUST00000100026 Tfpi2O35536 230 aa11.45□□□□□ -0.58
Ccdc50-203ENSMUST00000100026 Spink8Q09TK9 105 aa11.45□□□□□ -0.58
Ccdc50-203ENSMUST00000100026 Igkv4-92A0A0B4J1I2 117 aa11.45□□□□□ -0.58
Ccdc50-203ENSMUST00000100026 Sec61gP60060 68 aa11.45□□□□□ -0.58
Ccdc50-203ENSMUST00000100026 Gm10401E9Q3K6 71 aa11.45□□□□□ -0.58
Ccdc50-203ENSMUST00000100026 P01728 117 aa11.45□□□□□ -0.58
Ccdc50-203ENSMUST00000100026 2010109I03RikQ9CQ11 111 aa11.44□□□□□ -0.58
Ccdc50-203ENSMUST00000100026 Igkv8-30A0A140T8M3 121 aa11.44□□□□□ -0.58
Ccdc50-203ENSMUST00000100026 Q9CX25 107 aa11.44□□□□□ -0.58
Ccdc50-203ENSMUST00000100026 Col4a6B1AVK5 1691 aa11.44□□□□□ -0.58
Ccdc50-203ENSMUST00000100026 Odf3Q920N1 254 aa11.43□□□□□ -0.58
Ccdc50-203ENSMUST00000100026 Obox8V9GWY9 217 aa11.43□□□□□ -0.58
Ccdc50-203ENSMUST00000100026 Tmem258P61166 79 aa11.43□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 53.6 ms