RNA–Protein interactions for RNA: ENSMUST00000096198.9

Scn8a-202, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 1 (best) BASIC

Gene Scn8a, Length 1,072 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-202ENSMUST00000096198 Igkv4-74A0A0B4J1I3 119 aa5.16□□□□□ -1.58
Scn8a-202ENSMUST00000096198 Gm11564A2A4L9 201 aa5.16□□□□□ -1.58
Scn8a-202ENSMUST00000096198 H2al2bA9Z055 111 aa5.16□□□□□ -1.58
Scn8a-202ENSMUST00000096198 Gm11595B1AQA7 289 aa5.16□□□□□ -1.58
Scn8a-202ENSMUST00000096198 Krtap4-8B1AQA8 209 aa5.16□□□□□ -1.58
Scn8a-202ENSMUST00000096198 Krtap27-1E9PX37 202 aa5.16□□□□□ -1.58
Scn8a-202ENSMUST00000096198 B230217C12RikE9Q3Z1 139 aa5.16□□□□□ -1.58
Scn8a-202ENSMUST00000096198 S100a4P07091 101 aa5.16□□□□□ -1.58
Scn8a-202ENSMUST00000096198 S100a10P08207 97 aa5.16□□□□□ -1.58
Scn8a-202ENSMUST00000096198 Hoxa5P09021 270 aa5.16□□□□□ -1.58
Scn8a-202ENSMUST00000096198 Olfr313Q5NC55 308 aa5.16□□□□□ -1.58
Scn8a-202ENSMUST00000096198 Olfr322Q5NCC8 327 aa5.16□□□□□ -1.58
Scn8a-202ENSMUST00000096198 Trp53rkaQ5U452 244 aa5.16□□□□□ -1.58
Scn8a-202ENSMUST00000096198 Spag11Q8K4N2 71 aa5.16□□□□□ -1.58
Scn8a-202ENSMUST00000096198 Tp53rkQ99PW4 244 aa5.16□□□□□ -1.58
Scn8a-202ENSMUST00000096198 Rab5aQ9CQD1 215 aa5.16□□□□□ -1.58
Scn8a-202ENSMUST00000096198 Trbv16A0A0B4J1H3 115 aa5.15□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Trav9n-2A0A0G2JDP3 113 aa5.15□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Olfr1320A2AHM8 319 aa5.15□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Gm20499D3Z4G5 72 aa5.15□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Csn3P06796 181 aa5.15□□□□□ -1.59
Scn8a-202ENSMUST00000096198 MymxQ2Q5T5 84 aa5.15□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Trav7d-3Q5R1I1 112 aa5.15□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Trav7-2Q5R1I3 112 aa5.15□□□□□ -1.59
Scn8a-202ENSMUST00000096198 A930004D18RikQ8C8W7 157 aa5.15□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Chchd7Q8K2Q5 85 aa5.15□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Olfr509Q8VF20 321 aa5.15□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Ighv1-66A0A075B5X5 117 aa5.14□□□□□ -1.59
Scn8a-202ENSMUST00000096198 1810011H11RikE9PVZ2 95 aa5.14□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Gm12169F2Z474 250 aa5.14□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Gm10322F7D7I4 111 aa5.14□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Ins1P01325 108 aa5.14□□□□□ -1.59
Scn8a-202ENSMUST00000096198 P01793 123 aa5.14□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Smim15Q3UTD9 74 aa5.14□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Gm904Q3V2L5 102 aa5.14□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Smim7Q5RKS2 75 aa5.14□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Gkn1Q9CR36 201 aa5.14□□□□□ -1.59
Scn8a-202ENSMUST00000096198 HampQ9EQ21 83 aa5.14□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Gm26938S4R185 226 aa5.14□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Gm17359A0A0G2JEB7 487 aa5.13□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Gm14325A2AW67 498 aa5.13□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Igll1P20764 209 aa5.13□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Defa6P50704 93 aa5.13□□□□□ -1.59
Scn8a-202ENSMUST00000096198 1500011B03RikQ3TTH7 73 aa5.13□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Q3UUX7 111 aa5.13□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Gm12888Q3UW77 119 aa5.13□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Gm11733Q8BQP1 125 aa5.13□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Gm9944Q8C559 102 aa5.13□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Tmem14cQ9CQN6 114 aa5.13□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Nop10Q9CQS2 64 aa5.13□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Tppp3Q9CRB6 176 aaKnown RBP5.13□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Trav14-3A0A075B607 120 aa5.12□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Gm20379A0A087WR34 119 aa5.12□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Ighv8-6A0A0A6YXA3 118 aa5.12□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Ighv8-5A0A0A6YY60 119 aa5.12□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Omt2bD3YX29 119 aa5.12□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Foxi3E0CZH3 425 aa5.12□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Gm6176J3QK59 301 aa5.12□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Gm10509O88255 85 aa5.12□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Pglyrp1O88593 182 aa5.12□□□□□ -1.59
Scn8a-202ENSMUST00000096198 P01756 117 aa5.12□□□□□ -1.59
Scn8a-202ENSMUST00000096198 P01757 117 aa5.12□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Gm4567Q3UTA8 301 aa5.12□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Olfr984Q8VFN1 314 aa5.12□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Rab4bQ91ZR1 213 aa5.12□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Borcs7Q9CRC6 105 aa5.12□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Urm1Q9D2P4 101 aa5.12□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Tmem239Q9DA47 151 aa5.12□□□□□ -1.59
Scn8a-202ENSMUST00000096198 CtrlQ9ER05 264 aa5.12□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Trav12d-3A0A075B6A4 115 aa5.11□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Tmem238lA0A1B0GS74 79 aa5.11□□□□□ -1.59
Scn8a-202ENSMUST00000096198 A730046J19RikA0A1B0GSN8 89 aa5.11□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Gm21834J3QN05 151 aa5.11□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Mrps12O35680 139 aa5.11□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Cd24P24807 76 aa5.11□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Rab4aP56371 218 aa5.11□□□□□ -1.59
Scn8a-202ENSMUST00000096198 S100a1P56565 94 aa5.11□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Q24JP4 165 aa5.11□□□□□ -1.59
Scn8a-202ENSMUST00000096198 SriQ6P069 198 aa5.11□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Tmem140Q8BGY5 185 aa5.11□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Olfr975Q8VG91 310 aa5.11□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Mien1Q9CQ86 115 aa5.11□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Ndufa3Q9CQ91 84 aa5.11□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Iah1Q9DB29 249 aa5.11□□□□□ -1.59
Scn8a-202ENSMUST00000096198 MNCb-2875Q9DCB3 74 aa5.11□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Mdn1A2ANY6 5589 aaKnown RBP5.11□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Esp38A8R0X1 80 aa5.1□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Gm17732E9Q5I2 61 aa5.1□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Defa30E9QPZ2 93 aa5.1□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Gm9887F6RFI0 207 aa5.1□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Scgb2a2J3KMP9 96 aa5.1□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Cited1P97769 203 aa5.1□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Khdc1cQ4KL78 166 aa5.1□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Htr1dQ61224 374 aa5.1□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Ss18Q62280 418 aa5.1□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Defb40Q70KL2 73 aa5.1□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Gpha2Q925Q5 128 aa5.1□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Gpx7Q99LJ6 186 aa5.1□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Ighv8-11A0A075B5X4 119 aa5.09□□□□□ -1.59
Scn8a-202ENSMUST00000096198 Trdv5A0A075B661 115 aa5.09□□□□□ -1.59
Retrieved 100 of 22,080 RNA–protein pairs in 156.5 ms