RNA–Protein interactions for RNA: ENSMUST00000094951.9

Scn1a-202, Transcript of Sodium channel protein type 1 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn1a, Length 5,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1a-202ENSMUST00000094951 Dopey1Q8BL99 2399 aa5.34□□□□□ -1.55
Scn1a-202ENSMUST00000094951 Rif1Q6PR54 2419 aaKnown RBP5.34□□□□□ -1.55
Scn1a-202ENSMUST00000094951 Ighv1-85A0A075B5Y6 117 aa5.34□□□□□ -1.55
Scn1a-202ENSMUST00000094951 Fam19a1Q7TPG8 133 aa5.34□□□□□ -1.55
Scn1a-202ENSMUST00000094951 5730596B20RikQ8BQ08 205 aa5.34□□□□□ -1.55
Scn1a-202ENSMUST00000094951 Cd99Q8VCN6 175 aa5.34□□□□□ -1.55
Scn1a-202ENSMUST00000094951 Pfn2Q9JJV2 140 aa5.34□□□□□ -1.55
Scn1a-202ENSMUST00000094951 Ighv2-3A0A075B696 115 aa5.34□□□□□ -1.55
Scn1a-202ENSMUST00000094951 Ighv8-12A0A0G2JDE1 119 aa5.34□□□□□ -1.55
Scn1a-202ENSMUST00000094951 Vsig4F6TUL9 280 aa5.34□□□□□ -1.55
Scn1a-202ENSMUST00000094951 Tnfrsf13bQ9ET35 249 aa5.34□□□□□ -1.55
Scn1a-202ENSMUST00000094951 Wfdc15bQ9JHY4 80 aa5.34□□□□□ -1.55
Scn1a-202ENSMUST00000094951 Usf3B2RUQ2 2221 aa5.34□□□□□ -1.55
Scn1a-202ENSMUST00000094951 Pet100P0DJE0 76 aa5.34□□□□□ -1.55
Scn1a-202ENSMUST00000094951 Col5a3Q9JLI2 1739 aa5.34□□□□□ -1.55
Scn1a-202ENSMUST00000094951 Lrrk2Q5S006 2527 aa5.34□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Apoc4Q61268 124 aa5.34□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Znf672Q99LH4 468 aa5.34□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Trav12-3A0A075B648 115 aa5.33□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Cfap126Q6P8X9 189 aa5.33□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Q9D8Q6 235 aa5.33□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Igkv3-4A0A140T8Q4 119 aa5.33□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Ighv1-61P01749 117 aa5.33□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Fam24aQ8CF27 98 aa5.33□□□□□ -1.56
Scn1a-202ENSMUST00000094951 CadB2RQC6 2225 aa5.33□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Trav9d-4A0A0G2JG37 103 aa5.33□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Ang3P97802 145 aa5.33□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Mustn1Q99JI1 82 aa5.33□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Spink12Q9D256 87 aa5.33□□□□□ -1.56
Scn1a-202ENSMUST00000094951 1810062G17RikG3X8Y2 129 aa5.33□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Gm17577J3QNF7 156 aa5.33□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Rpl28P41105 137 aaKnown RBP5.33□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Rnf185Q91YT2 192 aa5.33□□□□□ -1.56
Scn1a-202ENSMUST00000094951 NbasE9Q411 2356 aa5.33□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Myo9bQ9QY06 2114 aa5.32□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Trav9n-4A0A075B631 113 aa5.32□□□□□ -1.56
Scn1a-202ENSMUST00000094951 1520401A03RikA0A0J9YVH6 598 aa5.32□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Fgf6P21658 208 aa5.32□□□□□ -1.56
Scn1a-202ENSMUST00000094951 P84751 237 aa5.32□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Klk9Q32M27 251 aa5.32□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Ociad2Q9D8W7 154 aa5.32□□□□□ -1.56
Scn1a-202ENSMUST00000094951 1700056E22RikF7CNM6 234 aa5.32□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Lect2O88803 151 aa5.32□□□□□ -1.56
Scn1a-202ENSMUST00000094951 PlaurP35456 327 aa5.32□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Tcl1b5P56845 121 aa5.32□□□□□ -1.56
Scn1a-202ENSMUST00000094951 SptssbQ925E8 76 aa5.32□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Gm37389A0A0A6YW05 95 aa5.32□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Gm10518F6UQQ9 182 aa5.32□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Fhl2O70433 279 aa5.32□□□□□ -1.56
Scn1a-202ENSMUST00000094951 P06329 120 aa5.32□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Gm9922Q8C3P1 144 aa5.32□□□□□ -1.56
Scn1a-202ENSMUST00000094951 SycnQ8VCK7 134 aa5.32□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Trav11A0A0B4J1J9 114 aa5.32□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Gm5464Q3UY29 175 aa5.32□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Ighv1-82A0A0G2JEU7 117 aa5.32□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Gm11733Q8BQP1 125 aa5.32□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Mlst8Q9DCJ1 326 aa5.32□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Gm9513B3GLJ6 99 aa5.31□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Ccl25O35903 144 aa5.31□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Insl3O09107 122 aa5.31□□□□□ -1.56
Scn1a-202ENSMUST00000094951 P01793 123 aa5.31□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Mtatp8P03930 67 aa5.31□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Gm20708H3BKF4 155 aa5.31□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Spag11Q8K4N2 71 aa5.31□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Gm8251F6VUT6 1994 aa5.31□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Trav7-6A0A075B640 112 aa5.3□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Gatd1Q8BFQ8 220 aa5.3□□□□□ -1.56
Scn1a-202ENSMUST00000094951 DscamQ9ERC8 2013 aa5.3□□□□□ -1.56
Scn1a-202ENSMUST00000094951 SonQ9QX47 2444 aaKnown RBP5.3□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Col4a2P08122 1707 aa5.3□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Igkv8-30A0A140T8M3 121 aa5.3□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Rnf152Q8BG47 203 aa5.29□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Fam240bJ3QMB3 78 aa5.29□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Acyp1P56376 99 aa5.29□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Mrpl35Q9CQL6 188 aa5.29□□□□□ -1.56
Scn1a-202ENSMUST00000094951 TncQ80YX1 2110 aa5.29□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Klk12B2RVZ0 247 aa5.29□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Gm10401E9Q3K6 71 aa5.29□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Col5a1O88207 1838 aa5.29□□□□□ -1.56
Scn1a-202ENSMUST00000094951 MyofQ69ZN7 2048 aaKnown RBP5.29□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Ighv2-9-1A0A075B697 116 aa5.29□□□□□ -1.56
Scn1a-202ENSMUST00000094951 IgipA0A1B0GR74 53 aa5.29□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Defa27F2Z403 93 aa5.29□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Defa21Q8C1P2 93 aa5.29□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Ndufa3Q9CQ91 84 aa5.28□□□□□ -1.56
Scn1a-202ENSMUST00000094951 1700010B08RikQ9DAI7 102 aa5.28□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Igkv1-122A0A140T8M9 119 aa5.28□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Igkv3-3A0A140T8Q0 119 aa5.28□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Lst1O08843 95 aa5.28□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Ufsp1Q9CZP0 217 aa5.28□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Obox2E9PXV9 151 aa5.28□□□□□ -1.56
Scn1a-202ENSMUST00000094951 AW011738F6S7Q2 159 aa5.28□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Cd24P24807 76 aa5.28□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Cox7cP17665 63 aa5.28□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Gm6040Q4QY32 63 aa5.28□□□□□ -1.56
Scn1a-202ENSMUST00000094951 Ighv8-8A0A0A6YXQ0 119 aa5.27□□□□□ -1.57
Scn1a-202ENSMUST00000094951 Igkv4-74A0A0B4J1I3 119 aa5.27□□□□□ -1.57
Scn1a-202ENSMUST00000094951 P01791 123 aa5.27□□□□□ -1.57
Scn1a-202ENSMUST00000094951 BB014433Q8C5R5 389 aa5.27□□□□□ -1.57
Scn1a-202ENSMUST00000094951 A130051J06RikQ8CAU1 227 aa5.27□□□□□ -1.57
Retrieved 100 of 22,080 RNA–protein pairs in 137.2 ms