RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Ighv1-64A0A075B5X3 117 aa8.64□□□□□ -1.03
Col9a1-202ENSMUST00000088349 Ighv1-75A0A075B5Y2 117 aa8.64□□□□□ -1.03
Col9a1-202ENSMUST00000088349 Tcrg-C1A0A075B5Z0 172 aa8.64□□□□□ -1.03
Col9a1-202ENSMUST00000088349 Ifitm10Q8BR26 201 aa8.64□□□□□ -1.03
Col9a1-202ENSMUST00000088349 Ighv3-3A0A0A6YWL2 116 aa8.63□□□□□ -1.03
Col9a1-202ENSMUST00000088349 Gm11444F6QMA6 170 aa8.63□□□□□ -1.03
Col9a1-202ENSMUST00000088349 Ube2d1P61080 147 aaKnown RBP8.63□□□□□ -1.03
Col9a1-202ENSMUST00000088349 Cep192E9Q4Y4 2514 aaKnown RBP8.63□□□□□ -1.03
Col9a1-202ENSMUST00000088349 Gm9925F6T2U3 160 aa8.63□□□□□ -1.03
Col9a1-202ENSMUST00000088349 PlaurP35456 327 aa8.63□□□□□ -1.03
Col9a1-202ENSMUST00000088349 SNORCQ9CXL7 121 aa8.63□□□□□ -1.03
Col9a1-202ENSMUST00000088349 Usp9yF8VPU6 2556 aa8.63□□□□□ -1.03
Col9a1-202ENSMUST00000088349 Gm6812B1AXU1 112 aa8.62□□□□□ -1.03
Col9a1-202ENSMUST00000088349 Gm17732E9Q5I2 61 aa8.62□□□□□ -1.03
Col9a1-202ENSMUST00000088349 OdaphJ3QNT8 126 aa8.62□□□□□ -1.03
Col9a1-202ENSMUST00000088349 Ndufb4Q9CQC7 129 aa8.62□□□□□ -1.03
Col9a1-202ENSMUST00000088349 Lyzl4Q9D925 145 aa8.62□□□□□ -1.03
Col9a1-202ENSMUST00000088349 Xirp2Q4U4S6 3784 aa8.62□□□□□ -1.03
Col9a1-202ENSMUST00000088349 ColqO35348 457 aa8.62□□□□□ -1.03
Col9a1-202ENSMUST00000088349 Gm21748Q3UE70 102 aa8.62□□□□□ -1.03
Col9a1-202ENSMUST00000088349 Epg5Q80TA9 2572 aa8.62□□□□□ -1.03
Col9a1-202ENSMUST00000088349 NipblQ6KCD5 2798 aaKnown RBP8.62□□□□□ -1.03
Col9a1-202ENSMUST00000088349 Ighv12-3A0A075B5T1 117 aa8.62□□□□□ -1.03
Col9a1-202ENSMUST00000088349 Polr2kQ63871 58 aa8.62□□□□□ -1.03
Col9a1-202ENSMUST00000088349 Higd1aQ9JLR9 95 aa8.62□□□□□ -1.03
Col9a1-202ENSMUST00000088349 Clec5aQ9R007 190 aa8.62□□□□□ -1.03
Col9a1-202ENSMUST00000088349 FcorP0DJI6 106 aa8.61□□□□□ -1.03
Col9a1-202ENSMUST00000088349 Anapc13Q8R034 74 aa8.61□□□□□ -1.03
Col9a1-202ENSMUST00000088349 Defb47Q30KN1 79 aa8.61□□□□□ -1.03
Col9a1-202ENSMUST00000088349 1500011B03RikQ3TTH7 73 aa8.61□□□□□ -1.03
Col9a1-202ENSMUST00000088349 Gphb5Q812B2 130 aa8.61□□□□□ -1.03
Col9a1-202ENSMUST00000088349 Ankrd39Q9D2X0 183 aa8.61□□□□□ -1.03
Col9a1-202ENSMUST00000088349 Lect2O88803 151 aa8.6□□□□□ -1.03
Col9a1-202ENSMUST00000088349 Dmrt3Q80WT2 476 aa8.6□□□□□ -1.03
Col9a1-202ENSMUST00000088349 Il1f10Q8R459 152 aa8.6□□□□□ -1.03
Col9a1-202ENSMUST00000088349 Ighv1-12A0A0A6YXJ9 117 aa8.6□□□□□ -1.03
Col9a1-202ENSMUST00000088349 4930596D02RikQ3V0H9 216 aa8.6□□□□□ -1.03
Col9a1-202ENSMUST00000088349 Mrpl35Q9CQL6 188 aa8.6□□□□□ -1.03
Col9a1-202ENSMUST00000088349 Cdip1Q9DB75 208 aa8.6□□□□□ -1.03
Col9a1-202ENSMUST00000088349 Ighv8-5A0A0A6YY60 119 aa8.6□□□□□ -1.03
Col9a1-202ENSMUST00000088349 Gm933J3QPC1 141 aa8.6□□□□□ -1.03
Col9a1-202ENSMUST00000088349 Tac4Q99N14 128 aa8.59□□□□□ -1.03
Col9a1-202ENSMUST00000088349 Crip2Q9DCT8 208 aaKnown RBP8.59□□□□□ -1.03
Col9a1-202ENSMUST00000088349 Akap13E9Q394 2776 aa8.59□□□□□ -1.03
Col9a1-202ENSMUST00000088349 Ube2d3P61079 147 aa8.59□□□□□ -1.03
Col9a1-202ENSMUST00000088349 Ube2d2P62838 147 aa8.59□□□□□ -1.03
Col9a1-202ENSMUST00000088349 BC048562Q80ZQ7 204 aa8.59□□□□□ -1.03
Col9a1-202ENSMUST00000088349 Ighv1-58A0A075B5W9 117 aa8.58□□□□□ -1.04
Col9a1-202ENSMUST00000088349 Usmg5Q78IK2 58 aa8.58□□□□□ -1.04
Col9a1-202ENSMUST00000088349 Spink12Q9D256 87 aa8.58□□□□□ -1.04
Col9a1-202ENSMUST00000088349 Ndufs7Q9DC70 224 aa8.58□□□□□ -1.04
Col9a1-202ENSMUST00000088349 Pdzd2E9Q1M1 2796 aa8.58□□□□□ -1.04
Col9a1-202ENSMUST00000088349 Trav4n-4A0A075B615 110 aa8.58□□□□□ -1.04
Col9a1-202ENSMUST00000088349 Gm21994F6T2D2 329 aa8.58□□□□□ -1.04
Col9a1-202ENSMUST00000088349 Sprr3O09116 238 aa8.58□□□□□ -1.04
Col9a1-202ENSMUST00000088349 Scgb1b2O35176 93 aa8.58□□□□□ -1.04
Col9a1-202ENSMUST00000088349 Fam19a4Q7TPG5 135 aa8.58□□□□□ -1.04
Col9a1-202ENSMUST00000088349 Mpv17l2Q8VIK2 200 aa8.58□□□□□ -1.04
Col9a1-202ENSMUST00000088349 Atp5lQ9CPQ8 103 aa8.57□□□□□ -1.04
Col9a1-202ENSMUST00000088349 Ighv1-66A0A075B5X5 117 aa8.57□□□□□ -1.04
Col9a1-202ENSMUST00000088349 Trav9-2A0A075B647 113 aa8.57□□□□□ -1.04
Col9a1-202ENSMUST00000088349 Trav9-4A0A0B4J1K2 113 aa8.57□□□□□ -1.04
Col9a1-202ENSMUST00000088349 Cfc1P97766 202 aa8.57□□□□□ -1.04
Col9a1-202ENSMUST00000088349 Morn5Q9DAI9 170 aa8.57□□□□□ -1.04
Col9a1-202ENSMUST00000088349 Mast4Q811L6 2618 aa8.57□□□□□ -1.04
Col9a1-202ENSMUST00000088349 BC025920Q3US60 128 aa8.56□□□□□ -1.04
Col9a1-202ENSMUST00000088349 Gm20499D3Z4G5 72 aa8.56□□□□□ -1.04
Col9a1-202ENSMUST00000088349 P01802 115 aa8.56□□□□□ -1.04
Col9a1-202ENSMUST00000088349 Timm17aQ9Z0V8 171 aa8.56□□□□□ -1.04
Col9a1-202ENSMUST00000088349 Ankrd17Q99NH0 2603 aaKnown RBP8.56□□□□□ -1.04
Col9a1-202ENSMUST00000088349 Gm20730A0A075B5J6 119 aa8.55□□□□□ -1.04
Col9a1-202ENSMUST00000088349 Igkv4-69A0A0B4J1I6 116 aa8.55□□□□□ -1.04
Col9a1-202ENSMUST00000088349 Gm9513B3GLJ6 99 aa8.55□□□□□ -1.04
Col9a1-202ENSMUST00000088349 Snrpd3P62320 126 aaKnown RBP8.55□□□□□ -1.04
Col9a1-202ENSMUST00000088349 Wfdc15aQ8BH89 80 aa8.55□□□□□ -1.04
Col9a1-202ENSMUST00000088349 Q9DAQ5 155 aa8.55□□□□□ -1.04
Col9a1-202ENSMUST00000088349 Gm10135F6TEE5 83 aa8.55□□□□□ -1.04
Col9a1-202ENSMUST00000088349 Pglyrp1O88593 182 aa8.55□□□□□ -1.04
Col9a1-202ENSMUST00000088349 LeprotO89013 131 aa8.55□□□□□ -1.04
Col9a1-202ENSMUST00000088349 Trav7d-3Q5R1I1 112 aa8.55□□□□□ -1.04
Col9a1-202ENSMUST00000088349 Gm9913Q8BQQ2 135 aa8.55□□□□□ -1.04
Col9a1-202ENSMUST00000088349 Tmem263Q9DAM7 115 aa8.55□□□□□ -1.04
Col9a1-202ENSMUST00000088349 Helz2E9QAM5 2947 aaKnown RBP8.55□□□□□ -1.04
Col9a1-202ENSMUST00000088349 Ighv2-7A0A075B5Q8 116 aa8.55□□□□□ -1.04
Col9a1-202ENSMUST00000088349 NpwA0A1L1STR8 176 aa8.55□□□□□ -1.04
Col9a1-202ENSMUST00000088349 P01753 117 aa8.55□□□□□ -1.04
Col9a1-202ENSMUST00000088349 Smr3aQ61900 147 aa8.55□□□□□ -1.04
Col9a1-202ENSMUST00000088349 Mfap4Q9D1H9 257 aa8.55□□□□□ -1.04
Col9a1-202ENSMUST00000088349 Scgb1b24B1B0N6 92 aa8.54□□□□□ -1.04
Col9a1-202ENSMUST00000088349 Rmi2Q3UPE3 149 aa8.54□□□□□ -1.04
Col9a1-202ENSMUST00000088349 TtrP07309 147 aa8.54□□□□□ -1.04
Col9a1-202ENSMUST00000088349 Ifi27l2aQ8R412 90 aa8.54□□□□□ -1.04
Col9a1-202ENSMUST00000088349 Cyyr1Q8VIH7 165 aa8.54□□□□□ -1.04
Col9a1-202ENSMUST00000088349 Atp6v0e2Q91XE7 81 aa8.54□□□□□ -1.04
Col9a1-202ENSMUST00000088349 Trbv16A0A0B4J1H3 115 aa8.53□□□□□ -1.04
Col9a1-202ENSMUST00000088349 1810032O08RikE9PZV8 113 aa8.53□□□□□ -1.04
Col9a1-202ENSMUST00000088349 Samd5Q3V1H9 173 aa8.53□□□□□ -1.04
Col9a1-202ENSMUST00000088349 Lyrm7Q9DA03 104 aa8.53□□□□□ -1.04
Col9a1-202ENSMUST00000088349 Trav13d-1A0A075B606 110 aa8.52□□□□□ -1.04
Col9a1-202ENSMUST00000088349 Gm17455G3UW87 128 aa8.52□□□□□ -1.04
Retrieved 100 of 22,080 RNA–protein pairs in 65.8 ms