RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 Lyg1Q9D7Q0 197 aa4.75□□□□□ -1.65
Lig4-202ENSMUST00000170033 RelnQ60841 3461 aa4.75□□□□□ -1.65
Lig4-202ENSMUST00000170033 Muc5acE9QAQ8 3455 aa4.75□□□□□ -1.65
Lig4-202ENSMUST00000170033 Umad1E0CX23 159 aa4.75□□□□□ -1.65
Lig4-202ENSMUST00000170033 Fxyd7P59648 80 aa4.75□□□□□ -1.65
Lig4-202ENSMUST00000170033 Tcf15Q60756 195 aa4.75□□□□□ -1.65
Lig4-202ENSMUST00000170033 Rbfox3Q8BIF2 374 aa4.75□□□□□ -1.65
Lig4-202ENSMUST00000170033 Prss29Q99MS4 279 aa4.75□□□□□ -1.65
Lig4-202ENSMUST00000170033 Dusp14Q9JLY7 198 aa4.75□□□□□ -1.65
Lig4-202ENSMUST00000170033 Cep295Q8BQ48 2412 aa4.74□□□□□ -1.65
Lig4-202ENSMUST00000170033 MgaA2AWL7 3003 aaKnown RBP4.74□□□□□ -1.65
Lig4-202ENSMUST00000170033 Gm3285A0A1W2P7U0 201 aa4.74□□□□□ -1.65
Lig4-202ENSMUST00000170033 Vsig4F6TUL9 280 aa4.74□□□□□ -1.65
Lig4-202ENSMUST00000170033 Ly6lH3BJG9 140 aa4.74□□□□□ -1.65
Lig4-202ENSMUST00000170033 P01753 117 aa4.74□□□□□ -1.65
Lig4-202ENSMUST00000170033 Usmg5Q78IK2 58 aa4.74□□□□□ -1.65
Lig4-202ENSMUST00000170033 Ighv1-80A0A075B5Y3 117 aa4.74□□□□□ -1.65
Lig4-202ENSMUST00000170033 Igkv4-69A0A0B4J1I6 116 aa4.74□□□□□ -1.65
Lig4-202ENSMUST00000170033 Omt2bD3YX29 119 aa4.74□□□□□ -1.65
Lig4-202ENSMUST00000170033 P01793 123 aa4.74□□□□□ -1.65
Lig4-202ENSMUST00000170033 Spink12Q9D256 87 aa4.74□□□□□ -1.65
Lig4-202ENSMUST00000170033 Ighv14-1A0A075B5R4 117 aa4.73□□□□□ -1.65
Lig4-202ENSMUST00000170033 Ighv1-63A0A075B5X2 117 aa4.73□□□□□ -1.65
Lig4-202ENSMUST00000170033 Ighv1-66A0A075B5X5 117 aa4.73□□□□□ -1.65
Lig4-202ENSMUST00000170033 Ighv1-82A0A0G2JEU7 117 aa4.73□□□□□ -1.65
Lig4-202ENSMUST00000170033 Gm37988J3QM41 62 aa4.73□□□□□ -1.65
Lig4-202ENSMUST00000170033 Tcrg-C3L7N479 172 aa4.73□□□□□ -1.65
Lig4-202ENSMUST00000170033 Reg3aO09037 175 aa4.73□□□□□ -1.65
Lig4-202ENSMUST00000170033 Vamp8O70404 101 aa4.73□□□□□ -1.65
Lig4-202ENSMUST00000170033 P03985 172 aa4.73□□□□□ -1.65
Lig4-202ENSMUST00000170033 Gm5464Q3UY29 175 aa4.73□□□□□ -1.65
Lig4-202ENSMUST00000170033 Ndufa4Q62425 82 aaKnown RBP4.73□□□□□ -1.65
Lig4-202ENSMUST00000170033 BC048502Q80Y74 154 aa4.73□□□□□ -1.65
Lig4-202ENSMUST00000170033 Snai3Q9QY31 287 aa4.73□□□□□ -1.65
Lig4-202ENSMUST00000170033 Ighv7-3A0A075B5R2 120 aa4.73□□□□□ -1.65
Lig4-202ENSMUST00000170033 Igkv4-70A0A0B4J1I5 116 aa4.73□□□□□ -1.65
Lig4-202ENSMUST00000170033 Cox7cP17665 63 aa4.73□□□□□ -1.65
Lig4-202ENSMUST00000170033 Odf1Q61999 247 aa4.73□□□□□ -1.65
Lig4-202ENSMUST00000170033 HilpdaQ9JLS0 64 aa4.73□□□□□ -1.65
Lig4-202ENSMUST00000170033 Trav14d-3-dv8A0A075B619 120 aa4.72□□□□□ -1.65
Lig4-202ENSMUST00000170033 Gm15557A6PWY0 234 aa4.72□□□□□ -1.65
Lig4-202ENSMUST00000170033 CirbpP60824 172 aaKnown RBP4.72□□□□□ -1.65
Lig4-202ENSMUST00000170033 Trav7-2Q5R1I3 112 aa4.72□□□□□ -1.65
Lig4-202ENSMUST00000170033 P06328 117 aa4.72□□□□□ -1.65
Lig4-202ENSMUST00000170033 Rpl13aP19253 203 aaKnown RBP4.72□□□□□ -1.65
Lig4-202ENSMUST00000170033 Tex26Q0VB26 296 aa4.72□□□□□ -1.65
Lig4-202ENSMUST00000170033 Slc25a20Q9Z2Z6 301 aaKnown RBP4.72□□□□□ -1.65
Lig4-202ENSMUST00000170033 Trav9d-1A0A075B699 112 aa4.72□□□□□ -1.65
Lig4-202ENSMUST00000170033 Prm2P07978 107 aa4.72□□□□□ -1.65
Lig4-202ENSMUST00000170033 Gm9922Q8C3P1 144 aa4.72□□□□□ -1.65
Lig4-202ENSMUST00000170033 Tln2Q71LX4 2375 aa4.71□□□□□ -1.65
Lig4-202ENSMUST00000170033 Trbv16A0A0B4J1H3 115 aa4.71□□□□□ -1.66
Lig4-202ENSMUST00000170033 Gm10226O88253 85 aa4.71□□□□□ -1.66
Lig4-202ENSMUST00000170033 Defa25Q5G864 92 aa4.71□□□□□ -1.66
Lig4-202ENSMUST00000170033 Iah1Q9DB29 249 aa4.71□□□□□ -1.66
Lig4-202ENSMUST00000170033 Bod1lE9Q6J5 3032 aa4.71□□□□□ -1.66
Lig4-202ENSMUST00000170033 Wdfy4E9Q2M9 3149 aa4.71□□□□□ -1.66
Lig4-202ENSMUST00000170033 Ighv1-9A0A0A6YW37 117 aa4.71□□□□□ -1.66
Lig4-202ENSMUST00000170033 4930432M17RikQ3V0W9 174 aa4.71□□□□□ -1.66
Lig4-202ENSMUST00000170033 Brk1Q91VR8 75 aa4.71□□□□□ -1.66
Lig4-202ENSMUST00000170033 Sprr3O09116 238 aa4.7□□□□□ -1.66
Lig4-202ENSMUST00000170033 P01820 115 aa4.7□□□□□ -1.66
Lig4-202ENSMUST00000170033 Egr2P08152 470 aa4.7□□□□□ -1.66
Lig4-202ENSMUST00000170033 NrepQ07475 68 aa4.7□□□□□ -1.66
Lig4-202ENSMUST00000170033 4930518I15RikQ3V2W7 57 aa4.7□□□□□ -1.66
Lig4-202ENSMUST00000170033 8030423J24RikQ9CX45 142 aa4.7□□□□□ -1.66
Lig4-202ENSMUST00000170033 Esm1Q9QYY7 184 aa4.7□□□□□ -1.66
Lig4-202ENSMUST00000170033 Trav4n-4A0A075B615 110 aa4.7□□□□□ -1.66
Lig4-202ENSMUST00000170033 4930447F04RikA2AFR2 126 aa4.7□□□□□ -1.66
Lig4-202ENSMUST00000170033 Gm20499D3Z4G5 72 aa4.7□□□□□ -1.66
Lig4-202ENSMUST00000170033 Ighv1-62-3P01754 117 aa4.7□□□□□ -1.66
Lig4-202ENSMUST00000170033 P01791 123 aa4.7□□□□□ -1.66
Lig4-202ENSMUST00000170033 Defa26Q3L180 93 aa4.7□□□□□ -1.66
Lig4-202ENSMUST00000170033 Cd52Q64389 74 aa4.7□□□□□ -1.66
Lig4-202ENSMUST00000170033 Wdr38Q9D994 303 aa4.7□□□□□ -1.66
Lig4-202ENSMUST00000170033 Celsr1O35161 3034 aa4.7□□□□□ -1.66
Lig4-202ENSMUST00000170033 Ighv7-4A0A0A6YXL5 121 aa4.7□□□□□ -1.66
Lig4-202ENSMUST00000170033 Gm45623A0A1B0GSF6 103 aa4.7□□□□□ -1.66
Lig4-202ENSMUST00000170033 Edn3P48299 214 aa4.7□□□□□ -1.66
Lig4-202ENSMUST00000170033 Tcl1b4P56844 120 aa4.7□□□□□ -1.66
Lig4-202ENSMUST00000170033 Q3UNZ8 350 aa4.7□□□□□ -1.66
Lig4-202ENSMUST00000170033 H2al1aQ5M8Q2 105 aa4.7□□□□□ -1.66
Lig4-202ENSMUST00000170033 Q9D131 166 aa4.7□□□□□ -1.66
Lig4-202ENSMUST00000170033 Synj2bpQ9D6K5 145 aa4.7□□□□□ -1.66
Lig4-202ENSMUST00000170033 Ighv1-52A0A0A6YXC3 117 aa4.69□□□□□ -1.66
Lig4-202ENSMUST00000170033 Igkv4-81A0A0G2JEY5 119 aa4.69□□□□□ -1.66
Lig4-202ENSMUST00000170033 Ndufa1O35683 70 aa4.69□□□□□ -1.66
Lig4-202ENSMUST00000170033 Ins2P01326 110 aa4.69□□□□□ -1.66
Lig4-202ENSMUST00000170033 Gpx1P11352 201 aa4.69□□□□□ -1.66
Lig4-202ENSMUST00000170033 Defa7P50705 93 aa4.69□□□□□ -1.66
Lig4-202ENSMUST00000170033 Sumo2P61957 95 aaKnown RBP4.69□□□□□ -1.66
Lig4-202ENSMUST00000170033 Ppp1r32Q148A4 427 aa4.69□□□□□ -1.66
Lig4-202ENSMUST00000170033 Foxc1Q61572 553 aa4.69□□□□□ -1.66
Lig4-202ENSMUST00000170033 Morn3Q8C5T4 241 aa4.69□□□□□ -1.66
Lig4-202ENSMUST00000170033 Ndufa3Q9CQ91 84 aa4.69□□□□□ -1.66
Lig4-202ENSMUST00000170033 Spta1P08032 2415 aa4.69□□□□□ -1.66
Lig4-202ENSMUST00000170033 Igkv4-57-1A0A075B5M4 119 aa4.69□□□□□ -1.66
Lig4-202ENSMUST00000170033 Gm17727E9Q4V7 109 aa4.69□□□□□ -1.66
Lig4-202ENSMUST00000170033 Ang2Q64438 145 aa4.69□□□□□ -1.66
Lig4-202ENSMUST00000170033 Ighv1-64A0A075B5X3 117 aa4.68□□□□□ -1.66
Retrieved 100 of 22,080 RNA–protein pairs in 69.3 ms