RNA–Protein interactions for RNA: ENSMUST00000167671.1

Ckap4-202, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 2,606 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-202ENSMUST00000167671 Lrrk2Q5S006 2527 aa13.03□□□□□ -0.32
Ckap4-202ENSMUST00000167671 Trav6-4A0A075B6B4 115 aa13.03□□□□□ -0.32
Ckap4-202ENSMUST00000167671 MsmbO08540 113 aa13.03□□□□□ -0.32
Ckap4-202ENSMUST00000167671 Cited2O35740 269 aa13.03□□□□□ -0.32
Ckap4-202ENSMUST00000167671 C1qcQ02105 246 aa13.03□□□□□ -0.32
Ckap4-202ENSMUST00000167671 Cysltr1Q99JA4 352 aa13.03□□□□□ -0.32
Ckap4-202ENSMUST00000167671 3110018I06RikQ9CXS0 120 aa13.03□□□□□ -0.32
Ckap4-202ENSMUST00000167671 Iah1Q9DB29 249 aa13.03□□□□□ -0.32
Ckap4-202ENSMUST00000167671 Rab37Q9JKM7 223 aa13.03□□□□□ -0.32
Ckap4-202ENSMUST00000167671 Nat8b-psE0CYC6 232 aa13.03□□□□□ -0.32
Ckap4-202ENSMUST00000167671 Mllt11P97783 90 aa13.03□□□□□ -0.32
Ckap4-202ENSMUST00000167671 Ube2d1P61080 147 aaKnown RBP13.02□□□□□ -0.32
Ckap4-202ENSMUST00000167671 Dpm2Q9Z324 84 aa13.02□□□□□ -0.32
Ckap4-202ENSMUST00000167671 Ighv1-50A0A075B5W1 117 aa13.02□□□□□ -0.33
Ckap4-202ENSMUST00000167671 Ighv1-64A0A075B5X3 117 aa13.02□□□□□ -0.33
Ckap4-202ENSMUST00000167671 Sorl1O88307 2215 aaKnown RBP13.01□□□□□ -0.33
Ckap4-202ENSMUST00000167671 OtoglF7A4A7 2325 aa13.01□□□□□ -0.33
Ckap4-202ENSMUST00000167671 Ttc28Q80XJ3 2450 aa13.01□□□□□ -0.33
Ckap4-202ENSMUST00000167671 P01726 129 aa13.01□□□□□ -0.33
Ckap4-202ENSMUST00000167671 Samd10Q7TST3 202 aa13.01□□□□□ -0.33
Ckap4-202ENSMUST00000167671 HampQ9EQ21 83 aa13.01□□□□□ -0.33
Ckap4-202ENSMUST00000167671 F11rO88792 300 aa13.01□□□□□ -0.33
Ckap4-202ENSMUST00000167671 Runx1Q03347 451 aa13.01□□□□□ -0.33
Ckap4-202ENSMUST00000167671 Spag11Q8K4N2 71 aa13.01□□□□□ -0.33
Ckap4-202ENSMUST00000167671 Cryba4Q9JJV0 196 aa13.01□□□□□ -0.33
Ckap4-202ENSMUST00000167671 Tcrg-C1A0A075B5Z0 172 aa13□□□□□ -0.33
Ckap4-202ENSMUST00000167671 Polr2kQ63871 58 aa13□□□□□ -0.33
Ckap4-202ENSMUST00000167671 Gm9961Q8BNV2 113 aa13□□□□□ -0.33
Ckap4-202ENSMUST00000167671 LrbaQ9ESE1 2856 aa13□□□□□ -0.33
Ckap4-202ENSMUST00000167671 CckP09240 115 aa12.99□□□□□ -0.33
Ckap4-202ENSMUST00000167671 Gm35549A0A0N4SUS7 141 aa12.99□□□□□ -0.33
Ckap4-202ENSMUST00000167671 Trbv17A0A140T8P8 114 aa12.99□□□□□ -0.33
Ckap4-202ENSMUST00000167671 Klhdc1Q80YG3 406 aa12.99□□□□□ -0.33
Ckap4-202ENSMUST00000167671 Atp6v0bQ91V37 205 aa12.99□□□□□ -0.33
Ckap4-202ENSMUST00000167671 Ndufb4Q9CQC7 129 aa12.99□□□□□ -0.33
Ckap4-202ENSMUST00000167671 Lyzl4Q9D925 145 aa12.99□□□□□ -0.33
Ckap4-202ENSMUST00000167671 Ankhd1E9PUR0 2548 aaKnown RBP12.99□□□□□ -0.33
Ckap4-202ENSMUST00000167671 Gphb5Q812B2 130 aa12.98□□□□□ -0.33
Ckap4-202ENSMUST00000167671 2310009B15RikA0A0A6YWI4 143 aa12.98□□□□□ -0.33
Ckap4-202ENSMUST00000167671 Ighv8-5A0A0A6YY60 119 aa12.98□□□□□ -0.33
Ckap4-202ENSMUST00000167671 Gm6812B1AXU1 112 aa12.98□□□□□ -0.33
Ckap4-202ENSMUST00000167671 Smr3aQ61900 147 aa12.98□□□□□ -0.33
Ckap4-202ENSMUST00000167671 C920008G01RikA0A0B4J1N1 112 aa12.97□□□□□ -0.33
Ckap4-202ENSMUST00000167671 PspnO70300 156 aa12.97□□□□□ -0.33
Ckap4-202ENSMUST00000167671 P01811 117 aa12.97□□□□□ -0.33
Ckap4-202ENSMUST00000167671 1500011B03RikQ3TTH7 73 aa12.97□□□□□ -0.33
Ckap4-202ENSMUST00000167671 BC048562Q80ZQ7 204 aa12.97□□□□□ -0.33
Ckap4-202ENSMUST00000167671 BC106179Q8C9L1 186 aa12.97□□□□□ -0.33
Ckap4-202ENSMUST00000167671 Gm17732E9Q5I2 61 aa12.96□□□□□ -0.33
Ckap4-202ENSMUST00000167671 Gm10553J3QPF1 123 aa12.96□□□□□ -0.33
Ckap4-202ENSMUST00000167671 Cks1bP61025 79 aa12.96□□□□□ -0.33
Ckap4-202ENSMUST00000167671 Spink12Q9D256 87 aa12.96□□□□□ -0.33
Ckap4-202ENSMUST00000167671 Ube2d3P61079 147 aa12.96□□□□□ -0.33
Ckap4-202ENSMUST00000167671 Ube2d2P62838 147 aa12.96□□□□□ -0.33
Ckap4-202ENSMUST00000167671 Akap6E9Q9K8 2307 aa12.96□□□□□ -0.34
Ckap4-202ENSMUST00000167671 Rpl13aP19253 203 aaKnown RBP12.95□□□□□ -0.34
Ckap4-202ENSMUST00000167671 Cdip1Q9DB75 208 aa12.95□□□□□ -0.34
Ckap4-202ENSMUST00000167671 Clec5aQ9R007 190 aa12.95□□□□□ -0.34
Ckap4-202ENSMUST00000167671 Itpr1P11881 2749 aa12.95□□□□□ -0.34
Ckap4-202ENSMUST00000167671 Trav4n-4A0A075B615 110 aa12.95□□□□□ -0.34
Ckap4-202ENSMUST00000167671 FcorP0DJI6 106 aa12.95□□□□□ -0.34
Ckap4-202ENSMUST00000167671 BC025920Q3US60 128 aa12.95□□□□□ -0.34
Ckap4-202ENSMUST00000167671 Il1f10Q8R459 152 aa12.95□□□□□ -0.34
Ckap4-202ENSMUST00000167671 Ankrd39Q9D2X0 183 aa12.95□□□□□ -0.34
Ckap4-202ENSMUST00000167671 Ighv1-66A0A075B5X5 117 aa12.94□□□□□ -0.34
Ckap4-202ENSMUST00000167671 Dmrt3Q80WT2 476 aa12.94□□□□□ -0.34
Ckap4-202ENSMUST00000167671 AY761184Q9D848 116 aa12.94□□□□□ -0.34
Ckap4-202ENSMUST00000167671 Ncor2Q9WU42 2472 aaKnown RBP12.94□□□□□ -0.34
Ckap4-202ENSMUST00000167671 Ighv1-12A0A0A6YXJ9 117 aa12.94□□□□□ -0.34
Ckap4-202ENSMUST00000167671 Igkv4-69A0A0B4J1I6 116 aa12.94□□□□□ -0.34
Ckap4-202ENSMUST00000167671 Gm21748Q3UE70 102 aa12.94□□□□□ -0.34
Ckap4-202ENSMUST00000167671 Esp24A8R0V6 68 aa12.93□□□□□ -0.34
Ckap4-202ENSMUST00000167671 Sprr3O09116 238 aa12.93□□□□□ -0.34
Ckap4-202ENSMUST00000167671 4930596D02RikQ3V0H9 216 aa12.93□□□□□ -0.34
Ckap4-202ENSMUST00000167671 Ifitm10Q8BR26 201 aa12.93□□□□□ -0.34
Ckap4-202ENSMUST00000167671 Higd1aQ9JLR9 95 aa12.93□□□□□ -0.34
Ckap4-202ENSMUST00000167671 Zc2hc1bQ9D534 172 aa12.93□□□□□ -0.34
Ckap4-202ENSMUST00000167671 Lelp1Q9DAE3 120 aa12.93□□□□□ -0.34
Ckap4-202ENSMUST00000167671 Pla2g2cP48076 150 aa12.92□□□□□ -0.34
Ckap4-202ENSMUST00000167671 Usmg5Q78IK2 58 aa12.92□□□□□ -0.34
Ckap4-202ENSMUST00000167671 Tac4Q99N14 128 aa12.92□□□□□ -0.34
Ckap4-202ENSMUST00000167671 Gm29666A0A087WQ99 126 aa12.92□□□□□ -0.34
Ckap4-202ENSMUST00000167671 Pla2g2aP31482 146 aa12.92□□□□□ -0.34
Ckap4-202ENSMUST00000167671 Mrpl35Q9CQL6 188 aa12.92□□□□□ -0.34
Ckap4-202ENSMUST00000167671 Pkd1l2Q7TN88 2461 aa12.92□□□□□ -0.34
Ckap4-202ENSMUST00000167671 OdaphJ3QNT8 126 aa12.91□□□□□ -0.34
Ckap4-202ENSMUST00000167671 Taf15Q8BQ46 557 aaKnown RBP12.91□□□□□ -0.34
Ckap4-202ENSMUST00000167671 Gm20499D3Z4G5 72 aa12.9□□□□□ -0.34
Ckap4-202ENSMUST00000167671 Lect2O88803 151 aa12.9□□□□□ -0.34
Ckap4-202ENSMUST00000167671 PlaurP35456 327 aa12.9□□□□□ -0.34
Ckap4-202ENSMUST00000167671 Cfc1P97766 202 aa12.9□□□□□ -0.34
Ckap4-202ENSMUST00000167671 Atp6v0e2Q91XE7 81 aa12.9□□□□□ -0.34
Ckap4-202ENSMUST00000167671 Abca2P41234 2434 aa12.9□□□□□ -0.34
Ckap4-202ENSMUST00000167671 Gm11444F6QMA6 170 aa12.9□□□□□ -0.35
Ckap4-202ENSMUST00000167671 Gm933J3QPC1 141 aa12.9□□□□□ -0.35
Ckap4-202ENSMUST00000167671 Pglyrp1O88593 182 aa12.9□□□□□ -0.35
Ckap4-202ENSMUST00000167671 Wfdc15aQ8BH89 80 aa12.9□□□□□ -0.35
Ckap4-202ENSMUST00000167671 Anapc13Q8R034 74 aa12.9□□□□□ -0.35
Ckap4-202ENSMUST00000167671 Crip2Q9DCT8 208 aaKnown RBP12.9□□□□□ -0.35
Ckap4-202ENSMUST00000167671 Timm17aQ9Z0V8 171 aa12.9□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 85.4 ms