RNA–Protein interactions for RNA: ENSMUST00000139560.7

Ndc1-204, Transcript of Nucleoporin NDC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc1, Length 4,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1-204ENSMUST00000139560 Gm21994F6T2D2 329 aa9.09□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Igkv1-99F6XWB2 120 aa9.09□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Gm26602M0QWA4 95 aa9.09□□□□□ -0.96
Ndc1-204ENSMUST00000139560 LoxP28301 411 aa9.09□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Cox11Q6P8I6 275 aa9.09□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Abca12E9Q876 2595 aa9.08□□□□□ -0.96
Ndc1-204ENSMUST00000139560 P01802 115 aa9.08□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Ly86O88188 162 aa9.08□□□□□ -0.96
Ndc1-204ENSMUST00000139560 P04942 107 aa9.08□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Tmem263Q9DAM7 115 aa9.08□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Ly6g5bQ8K1T4 194 aa9.08□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Tcrg-C1A0A075B5Z0 172 aa9.07□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Gm44965A0A0N4SVR3 59 aa9.07□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Gm15091B1AZM2 449 aa9.07□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Igkv4-57-1A0A075B5M4 119 aa9.07□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Dph3Q8K0W9 82 aa9.07□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Erdr1J3QMM0 206 aa9.07□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Gp9O88186 177 aa9.07□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Map6d1Q14BB9 191 aa9.07□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Gm815Q3UWS2 115 aa9.07□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Pygo2Q80V76 405 aa9.07□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Ighv1-77A0A0G2JGS9 117 aa9.06□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Reg3gO09049 174 aa9.06□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Hoxb4P10284 250 aa9.06□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Olfr311Q5NC59 308 aa9.06□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Fam110aQ8R184 296 aa9.06□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Synj2bpQ9D6K5 145 aa9.06□□□□□ -0.96
Ndc1-204ENSMUST00000139560 MalO09198 153 aa9.06□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Lamtor3O88653 124 aa9.06□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Smim26Q3V460 107 aa9.06□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Igkv3-2A0A075B5P0 119 aa9.05□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Smim20D3Z7Q2 69 aa9.05□□□□□ -0.96
Ndc1-204ENSMUST00000139560 BlcapP62951 87 aa9.05□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Smim10l1A0A087WNQ7 89 aa9.05□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Ighv1-74A0A0G2JGK2 117 aa9.05□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Ndufa12Q7TMF3 145 aaKnown RBP9.05□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Fam216bQ8CC14 138 aa9.05□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Rasl10aQ8K5A4 203 aa9.05□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Igkv4-59A0A0B4J1I8 117 aa9.05□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Trav13n-1A0A0G2JEU8 110 aa9.05□□□□□ -0.96
Ndc1-204ENSMUST00000139560 P0C913 63 aa9.05□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Fam19a4Q7TPG5 135 aa9.05□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Igkv4-61A0A0G2JH00 117 aa9.05□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Pla2g2aP31482 146 aa9.05□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Chchd5Q9CQP3 110 aa9.05□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Ndufs7Q9DC70 224 aa9.05□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Ighv1-23A0A0A6YVW3 117 aa9.04□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Trav9n-2A0A0G2JDP3 113 aa9.04□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Gm16381A0A1Y7VKT9 73 aa9.04□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Gm37988J3QM41 62 aa9.04□□□□□ -0.96
Ndc1-204ENSMUST00000139560 9230109A22RikQ8BHE6 111 aa9.04□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Wfdc15bQ9JHY4 80 aa9.04□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Cox7cP17665 63 aa9.04□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Tmem86bQ497J1 226 aa9.04□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Nbl1Q61477 178 aa9.04□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Vmo1Q5SXG7 201 aa9.04□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Cmc4Q61908 68 aa9.04□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Tmem14cQ9CQN6 114 aa9.04□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Mlst8Q9DCJ1 326 aa9.04□□□□□ -0.96
Ndc1-204ENSMUST00000139560 P01739 132 aa9.04□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Vwc2lQ505H4 222 aa9.04□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Tmem210Q9D2F0 147 aa9.04□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Trav9d-3A0A075B695 113 aa9.03□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Ramp1Q9WTJ5 148 aa9.03□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Samd13D3YUG0 102 aa9.03□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Egr2P08152 470 aa9.03□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Cryba4Q9JJV0 196 aa9.03□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Col5a3Q9JLI2 1739 aa9.03□□□□□ -0.96
Ndc1-204ENSMUST00000139560 DscamQ9ERC8 2013 aa9.03□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Igkv8-16A0A0G2JDG9 121 aa9.03□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Igkv8-24A0A140T8P5 121 aa9.03□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Q8R092 253 aa9.03□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Igkv4-72A0A0B4J1I4 117 aa9.02□□□□□ -0.96
Ndc1-204ENSMUST00000139560 LeprotO89013 131 aa9.02□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Gata3P23772 443 aa9.02□□□□□ -0.96
Ndc1-204ENSMUST00000139560 Unc79Q0KK59 2596 aa9.02□□□□□ -0.97
Ndc1-204ENSMUST00000139560 Trav9-2A0A075B647 113 aa9.02□□□□□ -0.97
Ndc1-204ENSMUST00000139560 Trav9-4A0A0B4J1K2 113 aa9.02□□□□□ -0.97
Ndc1-204ENSMUST00000139560 P01738 130 aa9.02□□□□□ -0.97
Ndc1-204ENSMUST00000139560 P01643 108 aa9.02□□□□□ -0.97
Ndc1-204ENSMUST00000139560 Pglyrp4Q0VB07 374 aa9.02□□□□□ -0.97
Ndc1-204ENSMUST00000139560 7420426K07RikQ3UX66 186 aa9.02□□□□□ -0.97
Ndc1-204ENSMUST00000139560 Foxc1Q61572 553 aa9.02□□□□□ -0.97
Ndc1-204ENSMUST00000139560 Mpv17l2Q8VIK2 200 aa9.02□□□□□ -0.97
Ndc1-204ENSMUST00000139560 Epg5Q80TA9 2572 aa9.02□□□□□ -0.97
Ndc1-204ENSMUST00000139560 Igkv3-1A0A075B5P1 119 aa9.02□□□□□ -0.97
Ndc1-204ENSMUST00000139560 SelenowP63300 88 aa9.02□□□□□ -0.97
Ndc1-204ENSMUST00000139560 Bub3Q9WVA3 326 aa9.02□□□□□ -0.97
Ndc1-204ENSMUST00000139560 Nbeal1E9PYP2 2688 aa9.01□□□□□ -0.97
Ndc1-204ENSMUST00000139560 Wisp2Q9Z0G4 251 aa9.01□□□□□ -0.97
Ndc1-204ENSMUST00000139560 P01786 117 aa9.01□□□□□ -0.97
Ndc1-204ENSMUST00000139560 Lgals4Q8K419 326 aa9.01□□□□□ -0.97
Ndc1-204ENSMUST00000139560 FlnbQ80X90 2602 aaKnown RBP9.01□□□□□ -0.97
Ndc1-204ENSMUST00000139560 Vsig4F6TUL9 280 aa9□□□□□ -0.97
Ndc1-204ENSMUST00000139560 P01753 117 aa9□□□□□ -0.97
Ndc1-204ENSMUST00000139560 Tmem243B2RVB9 118 aa9□□□□□ -0.97
Ndc1-204ENSMUST00000139560 Socs3O35718 225 aa9□□□□□ -0.97
Ndc1-204ENSMUST00000139560 P01750 117 aa9□□□□□ -0.97
Ndc1-204ENSMUST00000139560 Ccl24Q9JKC0 119 aa9□□□□□ -0.97
Ndc1-204ENSMUST00000139560 Ighv1-64A0A075B5X3 117 aa9□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 81.9 ms