RNA–Protein interactions for RNA: ENSMUST00000112251.8

Ubr3-202, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ubr3, Length 8,081 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-202ENSMUST00000112251 Serp1Q9Z1W5 66 aa13.14□□□□□ -0.31
Ubr3-202ENSMUST00000112251 CrebbpP45481 2441 aa13.14□□□□□ -0.31
Ubr3-202ENSMUST00000112251 P01789 122 aa13.14□□□□□ -0.31
Ubr3-202ENSMUST00000112251 P0C1Z5 52 aa13.14□□□□□ -0.31
Ubr3-202ENSMUST00000112251 Q8BTC1 67 aa13.14□□□□□ -0.31
Ubr3-202ENSMUST00000112251 Gm20379A0A087WR34 119 aa13.13□□□□□ -0.31
Ubr3-202ENSMUST00000112251 Igkv1-110A0A0B4J1I0 119 aa13.13□□□□□ -0.31
Ubr3-202ENSMUST00000112251 Q80X32 188 aaKnown RBP13.13□□□□□ -0.31
Ubr3-202ENSMUST00000112251 Cox17P56394 63 aa13.13□□□□□ -0.31
Ubr3-202ENSMUST00000112251 Atp23Q9CWQ3 201 aa13.13□□□□□ -0.31
Ubr3-202ENSMUST00000112251 Ccdc179J3QM76 67 aa13.13□□□□□ -0.31
Ubr3-202ENSMUST00000112251 Q91WE4 72 aa13.13□□□□□ -0.31
Ubr3-202ENSMUST00000112251 Itgb4A2A863 1818 aa13.13□□□□□ -0.31
Ubr3-202ENSMUST00000112251 Tm2d1Q99MB3 208 aa13.13□□□□□ -0.31
Ubr3-202ENSMUST00000112251 PtprqP0C5E4 2300 aa13.13□□□□□ -0.31
Ubr3-202ENSMUST00000112251 Gm12689Q8BQU9 117 aa13.13□□□□□ -0.31
Ubr3-202ENSMUST00000112251 Gm43517E9PYS1 339 aa13.12□□□□□ -0.31
Ubr3-202ENSMUST00000112251 Gm20878L7N244 103 aa13.12□□□□□ -0.31
Ubr3-202ENSMUST00000112251 Fam19a1Q7TPG8 133 aa13.12□□□□□ -0.31
Ubr3-202ENSMUST00000112251 Tfpi2O35536 230 aa13.12□□□□□ -0.31
Ubr3-202ENSMUST00000112251 Rnf144bQ8BKD6 301 aa13.12□□□□□ -0.31
Ubr3-202ENSMUST00000112251 Gm27027S4R1M6 97 aa13.12□□□□□ -0.31
Ubr3-202ENSMUST00000112251 TectaO08523 2155 aa13.12□□□□□ -0.31
Ubr3-202ENSMUST00000112251 Ypel3P61237 119 aa13.11□□□□□ -0.31
Ubr3-202ENSMUST00000112251 9430069I07RikQ9CX21 111 aa13.11□□□□□ -0.31
Ubr3-202ENSMUST00000112251 Ighv1-4A0A075B5T4 117 aa13.11□□□□□ -0.31
Ubr3-202ENSMUST00000112251 Zic4Q61467 341 aa13.11□□□□□ -0.31
Ubr3-202ENSMUST00000112251 B230359F08RikA0A0B4J1K3 109 aa13.11□□□□□ -0.31
Ubr3-202ENSMUST00000112251 Cox7bP56393 80 aa13.1□□□□□ -0.31
Ubr3-202ENSMUST00000112251 Gm11733Q8BQP1 125 aa13.1□□□□□ -0.31
Ubr3-202ENSMUST00000112251 Atp5g1Q9CR84 136 aa13.1□□□□□ -0.31
Ubr3-202ENSMUST00000112251 Fancd2osQ9D4K4 178 aa13.1□□□□□ -0.31
Ubr3-202ENSMUST00000112251 Trav13n-1A0A0G2JEU8 110 aa13.1□□□□□ -0.31
Ubr3-202ENSMUST00000112251 1700084M14RikB1AT01 78 aa13.1□□□□□ -0.31
Ubr3-202ENSMUST00000112251 Cysrt1Q9D1E4 142 aa13.1□□□□□ -0.31
Ubr3-202ENSMUST00000112251 Col4a1P02463 1669 aa13.1□□□□□ -0.31
Ubr3-202ENSMUST00000112251 Trav13-1A0A075B644 110 aa13.1□□□□□ -0.31
Ubr3-202ENSMUST00000112251 Rpl39lQ9CQD0 51 aa13.1□□□□□ -0.31
Ubr3-202ENSMUST00000112251 Igkv4-86A0A0G2JGE7 114 aa13.09□□□□□ -0.31
Ubr3-202ENSMUST00000112251 Tcl1b5P56845 121 aa13.09□□□□□ -0.31
Ubr3-202ENSMUST00000112251 Zfp11P10751 647 aa13.09□□□□□ -0.31
Ubr3-202ENSMUST00000112251 Pom121l2Q5SW25 972 aa13.09□□□□□ -0.31
Ubr3-202ENSMUST00000112251 Vpreb1P13372 142 aa13.09□□□□□ -0.31
Ubr3-202ENSMUST00000112251 Trav4d-3A0A075B625 110 aa13.09□□□□□ -0.31
Ubr3-202ENSMUST00000112251 U90926O08546 118 aa13.08□□□□□ -0.31
Ubr3-202ENSMUST00000112251 Lmo1Q924W9 156 aa13.08□□□□□ -0.31
Ubr3-202ENSMUST00000112251 Tet2Q4JK59 1912 aaKnown RBP13.08□□□□□ -0.31
Ubr3-202ENSMUST00000112251 LctF8VPT3 1931 aa13.08□□□□□ -0.32
Ubr3-202ENSMUST00000112251 Trav9n-2A0A0G2JDP3 113 aa13.08□□□□□ -0.32
Ubr3-202ENSMUST00000112251 Pnrc2Q9CR73 140 aa13.08□□□□□ -0.32
Ubr3-202ENSMUST00000112251 5730596B20RikQ8BQ08 205 aa13.08□□□□□ -0.32
Ubr3-202ENSMUST00000112251 PtprsB0V2N1 1907 aa13.07□□□□□ -0.32
Ubr3-202ENSMUST00000112251 Ighv1-50A0A075B5W1 117 aa13.07□□□□□ -0.32
Ubr3-202ENSMUST00000112251 Higd2aQ9CQJ1 106 aa13.07□□□□□ -0.32
Ubr3-202ENSMUST00000112251 Col18a1P39061 1774 aa13.07□□□□□ -0.32
Ubr3-202ENSMUST00000112251 Trav9-2A0A075B647 113 aa13.07□□□□□ -0.32
Ubr3-202ENSMUST00000112251 Trav13-4-dv7A0A075B6C2 110 aa13.07□□□□□ -0.32
Ubr3-202ENSMUST00000112251 Trav9-4A0A0B4J1K2 113 aa13.07□□□□□ -0.32
Ubr3-202ENSMUST00000112251 Ighv1-74A0A0G2JGK2 117 aa13.07□□□□□ -0.32
Ubr3-202ENSMUST00000112251 Fhl1P97447 280 aaKnown RBP13.07□□□□□ -0.32
Ubr3-202ENSMUST00000112251 Rnf152Q8BG47 203 aa13.07□□□□□ -0.32
Ubr3-202ENSMUST00000112251 Fhl4Q8CDC8 279 aa13.07□□□□□ -0.32
Ubr3-202ENSMUST00000112251 Trav13d-1A0A075B606 110 aa13.06□□□□□ -0.32
Ubr3-202ENSMUST00000112251 Cdkn2aQ64364 169 aa13.06□□□□□ -0.32
Ubr3-202ENSMUST00000112251 Mrpl35Q9CQL6 188 aa13.06□□□□□ -0.32
Ubr3-202ENSMUST00000112251 Brwd1Q921C3 2304 aa13.06□□□□□ -0.32
Ubr3-202ENSMUST00000112251 Ormdl1Q921I0 153 aa13.06□□□□□ -0.32
Ubr3-202ENSMUST00000112251 Ighv10-3A0A075B5T6 119 aa13.05□□□□□ -0.32
Ubr3-202ENSMUST00000112251 PscaP57096 123 aa13.05□□□□□ -0.32
Ubr3-202ENSMUST00000112251 Trbv13-1A0A0B4J1P8 112 aa13.05□□□□□ -0.32
Ubr3-202ENSMUST00000112251 Wfdc6bF6ULY1 148 aa13.05□□□□□ -0.32
Ubr3-202ENSMUST00000112251 Ighv1-64A0A075B5X3 117 aa13.04□□□□□ -0.32
Ubr3-202ENSMUST00000112251 Gm9887F6RFI0 207 aa13.04□□□□□ -0.32
Ubr3-202ENSMUST00000112251 Grem1O70326 184 aa13.04□□□□□ -0.32
Ubr3-202ENSMUST00000112251 Gm9936Q8C864 160 aa13.04□□□□□ -0.32
Ubr3-202ENSMUST00000112251 Rnf138Q9CQE0 245 aaKnown RBP13.04□□□□□ -0.32
Ubr3-202ENSMUST00000112251 P01655 112 aa13.04□□□□□ -0.32
Ubr3-202ENSMUST00000112251 Tmem254aP0DN89 123 aa13.04□□□□□ -0.32
Ubr3-202ENSMUST00000112251 Tmem254bP0DN90 123 aa13.04□□□□□ -0.32
Ubr3-202ENSMUST00000112251 Tmem254cP0DN91 123 aa13.04□□□□□ -0.32
Ubr3-202ENSMUST00000112251 C920008G01RikA0A0B4J1N1 112 aa13.03□□□□□ -0.32
Ubr3-202ENSMUST00000112251 Trbv14A0A140T8L9 115 aa13.03□□□□□ -0.32
Ubr3-202ENSMUST00000112251 Gm19684G3UZ45 117 aa13.03□□□□□ -0.32
Ubr3-202ENSMUST00000112251 Sh2d1aO88890 126 aa13.03□□□□□ -0.32
Ubr3-202ENSMUST00000112251 Igf1P05017 153 aa13.03□□□□□ -0.32
Ubr3-202ENSMUST00000112251 P04946 108 aa13.02□□□□□ -0.32
Ubr3-202ENSMUST00000112251 Obox8V9GWY9 217 aa13.02□□□□□ -0.32
Ubr3-202ENSMUST00000112251 Apoc4Q61268 124 aa13.02□□□□□ -0.33
Ubr3-202ENSMUST00000112251 Gm10638F6QEG2 257 aa13.01□□□□□ -0.33
Ubr3-202ENSMUST00000112251 Gata3P23772 443 aa13.01□□□□□ -0.33
Ubr3-202ENSMUST00000112251 Wfdc3Q14AE4 130 aa13.01□□□□□ -0.33
Ubr3-202ENSMUST00000112251 Tcl1b2P56841 117 aa13.01□□□□□ -0.33
Ubr3-202ENSMUST00000112251 Dmrtc1c1Q9D410 238 aa13□□□□□ -0.33
Ubr3-202ENSMUST00000112251 Trav4-3A0A0B4J1K1 110 aa13□□□□□ -0.33
Ubr3-202ENSMUST00000112251 Prok2Q9QXU7 128 aa13□□□□□ -0.33
Ubr3-202ENSMUST00000112251 Smrp1Q2MH31 260 aa13□□□□□ -0.33
Ubr3-202ENSMUST00000112251 A0A1L1SR50 188 aa13□□□□□ -0.33
Ubr3-202ENSMUST00000112251 Nxph4G3X9N5 304 aa12.99□□□□□ -0.33
Ubr3-202ENSMUST00000112251 Zc2hc1aQ8BJH1 324 aa12.99□□□□□ -0.33
Ubr3-202ENSMUST00000112251 P01638 115 aa12.99□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 73.4 ms