RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Tmem101Q91VP7 257 aa8.16□□□□□ -1.1
Ccdc28a-202ENSMUST00000080860 Tppp3Q9CRB6 176 aaKnown RBP8.16□□□□□ -1.1
Ccdc28a-202ENSMUST00000080860 Ube2l6Q9QZU9 153 aa8.16□□□□□ -1.1
Ccdc28a-202ENSMUST00000080860 Mrps12O35680 139 aa8.15□□□□□ -1.1
Ccdc28a-202ENSMUST00000080860 Rpl36aP83882 106 aaKnown RBP8.15□□□□□ -1.1
Ccdc28a-202ENSMUST00000080860 Khdc1aQ3UWR2 166 aa8.15□□□□□ -1.1
Ccdc28a-202ENSMUST00000080860 Pmis2Q497Q9 96 aa8.15□□□□□ -1.1
Ccdc28a-202ENSMUST00000080860 OstcQ78XF5 149 aa8.15□□□□□ -1.1
Ccdc28a-202ENSMUST00000080860 Atp6v0e2Q91XE7 81 aa8.15□□□□□ -1.1
Ccdc28a-202ENSMUST00000080860 Tmem14cQ9CQN6 114 aa8.15□□□□□ -1.1
Ccdc28a-202ENSMUST00000080860 Prss1Q9Z1R9 246 aa8.15□□□□□ -1.1
Ccdc28a-202ENSMUST00000080860 Ighv8-2A0A0A6YW58 119 aa8.14□□□□□ -1.11
Ccdc28a-202ENSMUST00000080860 Sub1P11031 127 aaKnown RBP8.14□□□□□ -1.11
Ccdc28a-202ENSMUST00000080860 Reg3bP35230 175 aa8.14□□□□□ -1.11
Ccdc28a-202ENSMUST00000080860 TirapQ99JY1 241 aa8.14□□□□□ -1.11
Ccdc28a-202ENSMUST00000080860 Atoh7Q9Z2E5 149 aa8.14□□□□□ -1.11
Ccdc28a-202ENSMUST00000080860 Gm26938S4R185 226 aa8.14□□□□□ -1.11
Ccdc28a-202ENSMUST00000080860 Gm14325A2AW67 498 aa8.13□□□□□ -1.11
Ccdc28a-202ENSMUST00000080860 Slc17a2Q5SZA1 478 aa8.13□□□□□ -1.11
Ccdc28a-202ENSMUST00000080860 Eif5a2Q8BGY2 153 aaKnown RBP8.13□□□□□ -1.11
Ccdc28a-202ENSMUST00000080860 Cryba4Q9JJV0 196 aa8.13□□□□□ -1.11
Ccdc28a-202ENSMUST00000080860 Snai3Q9QY31 287 aa8.13□□□□□ -1.11
Ccdc28a-202ENSMUST00000080860 Vps13bQ80TY5 3993 aa8.12□□□□□ -1.11
Ccdc28a-202ENSMUST00000080860 Smim15Q3UTD9 74 aa8.12□□□□□ -1.11
Ccdc28a-202ENSMUST00000080860 Megf9Q8BH27 600 aa8.12□□□□□ -1.11
Ccdc28a-202ENSMUST00000080860 Iah1Q9DB29 249 aa8.12□□□□□ -1.11
Ccdc28a-202ENSMUST00000080860 Trav14n-3A0A075B645 120 aa8.11□□□□□ -1.11
Ccdc28a-202ENSMUST00000080860 Gm17472A0A075B683 117 aa8.11□□□□□ -1.11
Ccdc28a-202ENSMUST00000080860 Gm12355A2A4X6 163 aa8.11□□□□□ -1.11
Ccdc28a-202ENSMUST00000080860 Gm13030A2APQ6 143 aa8.11□□□□□ -1.11
Ccdc28a-202ENSMUST00000080860 1700015F17RikD3YUK8 150 aa8.11□□□□□ -1.11
Ccdc28a-202ENSMUST00000080860 Gm28038F7BCN9 126 aa8.11□□□□□ -1.11
Ccdc28a-202ENSMUST00000080860 Gm5629P06327 117 aa8.11□□□□□ -1.11
Ccdc28a-202ENSMUST00000080860 Srsf3P84104 164 aaKnown RBP8.11□□□□□ -1.11
Ccdc28a-202ENSMUST00000080860 Ammecr1lQ8JZZ6 310 aa8.11□□□□□ -1.11
Ccdc28a-202ENSMUST00000080860 Mien1Q9CQ86 115 aa8.11□□□□□ -1.11
Ccdc28a-202ENSMUST00000080860 Tmed6Q9CQG0 239 aa8.11□□□□□ -1.11
Ccdc28a-202ENSMUST00000080860 Ins1P01325 108 aa8.1□□□□□ -1.11
Ccdc28a-202ENSMUST00000080860 Rpl23P62830 140 aaKnown RBP8.1□□□□□ -1.11
Ccdc28a-202ENSMUST00000080860 AsipQ03288 131 aa8.1□□□□□ -1.11
Ccdc28a-202ENSMUST00000080860 Trav14d-1A0A075B6B1 121 aa8.09□□□□□ -1.11
Ccdc28a-202ENSMUST00000080860 Sh2d1aO88890 126 aa8.09□□□□□ -1.11
Ccdc28a-202ENSMUST00000080860 PemtQ61907 199 aa8.09□□□□□ -1.11
Ccdc28a-202ENSMUST00000080860 SnrpcQ62241 159 aa8.09□□□□□ -1.11
Ccdc28a-202ENSMUST00000080860 Mgst1Q91VS7 155 aa8.09□□□□□ -1.11
Ccdc28a-202ENSMUST00000080860 Scgb3a2Q920H1 91 aa8.09□□□□□ -1.11
Ccdc28a-202ENSMUST00000080860 Malsu1Q9CWV0 228 aa8.09□□□□□ -1.11
Ccdc28a-202ENSMUST00000080860 Plac8Q9JI48 112 aa8.09□□□□□ -1.11
Ccdc28a-202ENSMUST00000080860 Ighv8-6A0A0A6YXA3 118 aa8.08□□□□□ -1.12
Ccdc28a-202ENSMUST00000080860 Tmsb15aA2AEH9 79 aa8.08□□□□□ -1.12
Ccdc28a-202ENSMUST00000080860 CrygaP04345 174 aa8.08□□□□□ -1.12
Ccdc28a-202ENSMUST00000080860 Gm12888Q3UW77 119 aa8.08□□□□□ -1.12
Ccdc28a-202ENSMUST00000080860 Smim9Q3V0X1 137 aa8.08□□□□□ -1.12
Ccdc28a-202ENSMUST00000080860 Nupr2Q497P3 102 aa8.08□□□□□ -1.12
Ccdc28a-202ENSMUST00000080860 Glrx2Q923X4 156 aa8.08□□□□□ -1.12
Ccdc28a-202ENSMUST00000080860 PmvkQ9D1G2 192 aa8.08□□□□□ -1.12
Ccdc28a-202ENSMUST00000080860 Pgpep1Q9ESW8 209 aa8.08□□□□□ -1.12
Ccdc28a-202ENSMUST00000080860 Ms4a12A0A087WSB9 263 aa8.07□□□□□ -1.12
Ccdc28a-202ENSMUST00000080860 P06334 169 aa8.07□□□□□ -1.12
Ccdc28a-202ENSMUST00000080860 NpsP0C0P8 89 aa8.07□□□□□ -1.12
Ccdc28a-202ENSMUST00000080860 ErasQ7TN89 227 aa8.07□□□□□ -1.12
Ccdc28a-202ENSMUST00000080860 Gm16485Q8C4B7 115 aa8.07□□□□□ -1.12
Ccdc28a-202ENSMUST00000080860 Gm4861Q8C5A4 106 aa8.07□□□□□ -1.12
Ccdc28a-202ENSMUST00000080860 Med28Q920D3 178 aa8.07□□□□□ -1.12
Ccdc28a-202ENSMUST00000080860 Gpx7Q99LJ6 186 aa8.07□□□□□ -1.12
Ccdc28a-202ENSMUST00000080860 Ndufa6Q9CQZ5 131 aaKnown RBP8.07□□□□□ -1.12
Ccdc28a-202ENSMUST00000080860 Q9DAQ5 155 aa8.07□□□□□ -1.12
Ccdc28a-202ENSMUST00000080860 PcloQ9QYX7 5068 aa8.06□□□□□ -1.12
Ccdc28a-202ENSMUST00000080860 HydinQ80W93 5154 aa8.06□□□□□ -1.12
Ccdc28a-202ENSMUST00000080860 Dnhd1D3Z2X2 4750 aa8.06□□□□□ -1.12
Ccdc28a-202ENSMUST00000080860 Abca13Q5SSE9 5034 aa8.05□□□□□ -1.12
Ccdc28a-202ENSMUST00000080860 Trav7-4A0A075B6C1 113 aa8.05□□□□□ -1.12
Ccdc28a-202ENSMUST00000080860 Ighv1-49A0A0A6YWX2 117 aa8.05□□□□□ -1.12
Ccdc28a-202ENSMUST00000080860 1810011H11RikE9PVZ2 95 aa8.05□□□□□ -1.12
Ccdc28a-202ENSMUST00000080860 Defa35E9QLQ1 93 aa8.05□□□□□ -1.12
Ccdc28a-202ENSMUST00000080860 Foxh1O88621 401 aa8.05□□□□□ -1.12
Ccdc28a-202ENSMUST00000080860 P01756 117 aa8.05□□□□□ -1.12
Ccdc28a-202ENSMUST00000080860 P01757 117 aa8.05□□□□□ -1.12
Ccdc28a-202ENSMUST00000080860 PigyP0C1P0 71 aa8.05□□□□□ -1.12
Ccdc28a-202ENSMUST00000080860 Trav7d-4Q5R1H9 113 aa8.05□□□□□ -1.12
Ccdc28a-202ENSMUST00000080860 Gm5617Q91VN2 117 aa8.05□□□□□ -1.12
Ccdc28a-202ENSMUST00000080860 Tctex1d2Q9CQ66 144 aa8.05□□□□□ -1.12
Ccdc28a-202ENSMUST00000080860 Pkhd1l1Q80ZA4 4249 aa8.05□□□□□ -1.12
Ccdc28a-202ENSMUST00000080860 Trav7n-4A0A075B620 113 aa8.04□□□□□ -1.12
Ccdc28a-202ENSMUST00000080860 Zfp951A0A087WRH0 451 aa8.04□□□□□ -1.12
Ccdc28a-202ENSMUST00000080860 Cbln2Q8BGU2 224 aa8.04□□□□□ -1.12
Ccdc28a-202ENSMUST00000080860 Gm14214V9GX35 225 aa8.04□□□□□ -1.12
Ccdc28a-202ENSMUST00000080860 Ighv1-11A0A0A6YWI9 117 aa8.03□□□□□ -1.12
Ccdc28a-202ENSMUST00000080860 Gm10112D3YWP5 117 aa8.03□□□□□ -1.12
Ccdc28a-202ENSMUST00000080860 Omt2bD3YX29 119 aa8.03□□□□□ -1.12
Ccdc28a-202ENSMUST00000080860 Tnp2P11378 117 aa8.03□□□□□ -1.12
Ccdc28a-202ENSMUST00000080860 Tppp2Q0P5Y3 170 aa8.03□□□□□ -1.12
Ccdc28a-202ENSMUST00000080860 Odf3l2Q3TZ65 277 aa8.03□□□□□ -1.12
Ccdc28a-202ENSMUST00000080860 March3Q8BRX9 218 aa8.03□□□□□ -1.12
Ccdc28a-202ENSMUST00000080860 EnhoQ8K1D8 76 aa8.03□□□□□ -1.12
Ccdc28a-202ENSMUST00000080860 Il1f10Q8R459 152 aa8.03□□□□□ -1.12
Ccdc28a-202ENSMUST00000080860 Phlda3Q9WV95 125 aa8.03□□□□□ -1.12
Ccdc28a-202ENSMUST00000080860 Emp2O88662 172 aa8.02□□□□□ -1.13
Ccdc28a-202ENSMUST00000080860 PolP10400 120 aa8.02□□□□□ -1.13
Ccdc28a-202ENSMUST00000080860 Rpl13aP19253 203 aaKnown RBP8.02□□□□□ -1.13
Retrieved 100 of 22,080 RNA–protein pairs in 42.6 ms