RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 B430305J03RikQ8BQQ8 176 aa7.85□□□□□ -1.15
Ccdc40-201ENSMUST00000035935 Gm12689Q8BQU9 117 aa7.85□□□□□ -1.15
Ccdc40-201ENSMUST00000035935 Notch3Q61982 2318 aa7.85□□□□□ -1.15
Ccdc40-201ENSMUST00000035935 1810032O08RikE9PZV8 113 aa7.85□□□□□ -1.15
Ccdc40-201ENSMUST00000035935 Gata3P23772 443 aa7.85□□□□□ -1.15
Ccdc40-201ENSMUST00000035935 A130051J06RikQ8CAU1 227 aa7.84□□□□□ -1.15
Ccdc40-201ENSMUST00000035935 Igkv8-34A0A0G2JDU0 121 aa7.84□□□□□ -1.15
Ccdc40-201ENSMUST00000035935 Ovol3D3YYM0 189 aa7.84□□□□□ -1.15
Ccdc40-201ENSMUST00000035935 Ndufa1O35683 70 aa7.84□□□□□ -1.15
Ccdc40-201ENSMUST00000035935 BC048562Q80ZQ7 204 aa7.84□□□□□ -1.15
Ccdc40-201ENSMUST00000035935 Defa2P28309 93 aa7.84□□□□□ -1.15
Ccdc40-201ENSMUST00000035935 Trav9n-2A0A0G2JDP3 113 aa7.84□□□□□ -1.15
Ccdc40-201ENSMUST00000035935 Igkv4-62A0A0G2JDW9 117 aa7.84□□□□□ -1.15
Ccdc40-201ENSMUST00000035935 Defa16P50714 93 aa7.83□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Vwc2lQ505H4 222 aa7.83□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Eif4ebp1Q60876 117 aa7.83□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Gm14137Q8CE97 175 aa7.83□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Gm7102J3QQ10 178 aa7.83□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Rmi2Q3UPE3 149 aa7.83□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Fam110dQ80X91 271 aa7.83□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Mfap4Q9D1H9 257 aa7.83□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Pcp4P63054 62 aa7.83□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Iglc1A0A0G2JE99 106 aa7.82□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Gm9925F6T2U3 160 aa7.82□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Lamtor3O88653 124 aa7.82□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 P01843 105 aa7.82□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Runx1Q03347 451 aa7.82□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Cox11Q6P8I6 275 aa7.82□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 4930415O20RikQ8CDT5 131 aa7.82□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Q9D131 166 aa7.82□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Tax1bp3Q9DBG9 124 aa7.82□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Pfn2Q9JJV2 140 aa7.82□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 P06328 117 aa7.82□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Rnase1P00683 149 aa7.82□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 P01896 185 aa7.82□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Fxyd5P97808 178 aa7.82□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Prpf8Q99PV0 2335 aaKnown RBP7.82□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Ndufs7Q9DC70 224 aa7.82□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Ebi3O35228 228 aa7.81□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Reg3dQ9QUS9 175 aa7.81□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Gm10226O88253 85 aa7.81□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Rpl39P62892 51 aa7.81□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Gm9747Q810H1 104 aa7.81□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Trav9d-4A0A0G2JG37 103 aa7.81□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Fam19a4Q7TPG5 135 aa7.81□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Chchd5Q9CQP3 110 aa7.81□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Ighv1-11A0A0A6YWI9 117 aa7.81□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Lce6aD3YV94 81 aa7.81□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Hist1h4aP62806 103 aaKnown RBP7.81□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Znf740Q6NZQ6 180 aa7.81□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Ncoa6Q9JL19 2067 aa7.81□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Col27a1Q5QNQ9 1845 aa7.8□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Trbv13-1A0A0B4J1P8 112 aa7.8□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Defa-rs2P17534 91 aa7.8□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Rpl32P62911 135 aaKnown RBP7.8□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 AcacbE9Q4Z2 2448 aa7.8□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Ang4Q3TMQ6 144 aa7.8□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 9430069I07RikQ9CX21 111 aa7.8□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Rif1Q6PR54 2419 aaKnown RBP7.8□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Igkv8-16A0A0G2JDG9 121 aa7.8□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Glrp1E9Q9S8 174 aa7.8□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 1700056E22RikF7CNM6 234 aa7.8□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Eml6Q5SQM0 1958 aa7.79□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Pglyrp4Q0VB07 374 aa7.79□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Cdpf1Q8R3A2 119 aa7.79□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Tet1Q3URK3 2007 aaKnown RBP7.79□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Igkv3-2A0A075B5P0 119 aa7.79□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Ndufa12Q7TMF3 145 aaKnown RBP7.79□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 CnfnQ6PCW6 111 aa7.79□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Trav9d-3A0A075B695 113 aa7.79□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Igkv4-74A0A0B4J1I3 119 aa7.79□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Gm17359A0A0G2JEB7 487 aa7.79□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 SelenowP63300 88 aa7.79□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Atp6v0e2Q91XE7 81 aa7.79□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Ucn2Q99ML8 113 aa7.79□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Hrct1Q9D6B9 109 aa7.79□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 OdaphJ3QNT8 126 aa7.78□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Gm26602M0QWA4 95 aa7.78□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Lst1O08843 95 aa7.78□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 NrgnP60761 78 aa7.78□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Sslp1Q3UN54 99 aa7.78□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Gm4861Q8C5A4 106 aa7.78□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Fhl1P97447 280 aaKnown RBP7.78□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Ang3P97802 145 aa7.78□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Rnf185Q91YT2 192 aa7.78□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Tmem223Q9CQE2 199 aaKnown RBP7.78□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Mrpl35Q9CQL6 188 aa7.78□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Gm20730A0A075B5J6 119 aa7.78□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Gm7257D3YX25 99 aa7.78□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Znf575Q3TXZ1 239 aa7.78□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Defa20Q45VN2 95 aa7.78□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Cfap126Q6P8X9 189 aa7.78□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 Ociad2Q9D8W7 154 aa7.78□□□□□ -1.16
Ccdc40-201ENSMUST00000035935 C920008G01RikA0A0B4J1N1 112 aa7.77□□□□□ -1.17
Ccdc40-201ENSMUST00000035935 PemtQ61907 199 aa7.77□□□□□ -1.17
Ccdc40-201ENSMUST00000035935 Ubl5Q9EPV8 73 aa7.77□□□□□ -1.17
Ccdc40-201ENSMUST00000035935 1700010B08RikQ9DAI7 102 aa7.77□□□□□ -1.17
Ccdc40-201ENSMUST00000035935 Igkv4-53A0A0G2JFC6 119 aa7.77□□□□□ -1.17
Ccdc40-201ENSMUST00000035935 Gatd1Q8BFQ8 220 aa7.77□□□□□ -1.17
Ccdc40-201ENSMUST00000035935 CtrlQ9ER05 264 aa7.77□□□□□ -1.17
Retrieved 100 of 22,080 RNA–protein pairs in 13.2 ms