RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Bahcc1Q3UHR0 2643 aa7.69□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Vsig4F6TUL9 280 aa7.69□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Hoxb4P10284 250 aa7.69□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Gata4Q08369 441 aa7.69□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Mpv17l2Q8VIK2 200 aa7.69□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Sdk1Q3UH53 2193 aa7.69□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Igkv2-137A0A0B4J1H6 120 aa7.69□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Runx1Q03347 451 aa7.69□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Tmem213Q08EA8 116 aa7.69□□□□□ -1.18
Ldlr-201ENSMUST00000034713 9230109A22RikQ8BHE6 111 aa7.69□□□□□ -1.18
Ldlr-201ENSMUST00000034713 BC067074F6RXI4 2391 aa7.69□□□□□ -1.18
Ldlr-201ENSMUST00000034713 5730522E02RikQ5SP45 163 aa7.68□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Tomm7Q9D173 55 aa7.68□□□□□ -1.18
Ldlr-201ENSMUST00000034713 1500011B03RikQ3TTH7 73 aa7.68□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Arhgef17Q80U35 2057 aa7.68□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Pglyrp4Q0VB07 374 aa7.68□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Gm7102J3QQ10 178 aa7.67□□□□□ -1.18
Ldlr-201ENSMUST00000034713 P01741 114 aa7.67□□□□□ -1.18
Ldlr-201ENSMUST00000034713 P01750 117 aa7.67□□□□□ -1.18
Ldlr-201ENSMUST00000034713 P01786 117 aa7.67□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Prr3Q811B5 190 aaKnown RBP7.67□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Trav4-3A0A0B4J1K1 110 aa7.67□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Smim20D3Z7Q2 69 aa7.67□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Atp5eP56382 52 aa7.67□□□□□ -1.18
Ldlr-201ENSMUST00000034713 SvipQ3UZP4 77 aa7.67□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Ndufa4l2Q4FZG9 87 aa7.67□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Ubl5Q9EPV8 73 aa7.67□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Q8R092 253 aa7.67□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Trbv16A0A0B4J1H3 115 aa7.67□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Gm2564F6Z9S8 108 aa7.66□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Ccl19O70460 108 aa7.66□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Gm6040Q4QY32 63 aa7.66□□□□□ -1.18
Ldlr-201ENSMUST00000034713 PpdpfQ9CR37 115 aa7.66□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Lyzl4Q9D925 145 aa7.66□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Vps13aQ5H8C4 3166 aa7.66□□□□□ -1.18
Ldlr-201ENSMUST00000034713 P01738 130 aa7.66□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Foxi2Q3I5G5 311 aa7.66□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Gm9913Q8BQQ2 135 aa7.66□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Col12a1Q60847 3120 aa7.66□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Gm21994F6T2D2 329 aa7.66□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Rbx1P62878 108 aa7.66□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Rpl32P62911 135 aaKnown RBP7.66□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Synj2bpQ9D6K5 145 aa7.66□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Spata25Q9DA57 226 aa7.66□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Gm5878E9PUB3 99 aa7.66□□□□□ -1.18
Ldlr-201ENSMUST00000034713 HttP42859 3119 aa7.65□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Gm815Q3UWS2 115 aa7.65□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Nav3Q80TN7 2359 aa7.65□□□□□ -1.18
Ldlr-201ENSMUST00000034713 Znf740Q6NZQ6 180 aa7.65□□□□□ -1.19
Ldlr-201ENSMUST00000034713 Ighv1-53A0A075B5W3 117 aa7.64□□□□□ -1.19
Ldlr-201ENSMUST00000034713 Gm17455G3UW87 128 aa7.64□□□□□ -1.19
Ldlr-201ENSMUST00000034713 C2cd3Q52KB6 2323 aa7.64□□□□□ -1.19
Ldlr-201ENSMUST00000034713 4930415O20RikQ8CDT5 131 aa7.64□□□□□ -1.19
Ldlr-201ENSMUST00000034713 Hivep3A2A884 2348 aa7.64□□□□□ -1.19
Ldlr-201ENSMUST00000034713 Ighv1-52A0A0A6YXC3 117 aa7.64□□□□□ -1.19
Ldlr-201ENSMUST00000034713 Lgals4Q8K419 326 aa7.64□□□□□ -1.19
Ldlr-201ENSMUST00000034713 Ube2e2Q91W82 201 aa7.64□□□□□ -1.19
Ldlr-201ENSMUST00000034713 Gm17359A0A0G2JEB7 487 aa7.64□□□□□ -1.19
Ldlr-201ENSMUST00000034713 P01643 108 aa7.64□□□□□ -1.19
Ldlr-201ENSMUST00000034713 Vwc2lQ505H4 222 aa7.64□□□□□ -1.19
Ldlr-201ENSMUST00000034713 Ccl24Q9JKC0 119 aa7.64□□□□□ -1.19
Ldlr-201ENSMUST00000034713 Gm20481G3UXK4 153 aa7.63□□□□□ -1.19
Ldlr-201ENSMUST00000034713 Gm9958Q8C9U4 106 aa7.63□□□□□ -1.19
Ldlr-201ENSMUST00000034713 Mrpl52Q9D0Y8 121 aa7.63□□□□□ -1.19
Ldlr-201ENSMUST00000034713 Snai3Q9QY31 287 aa7.63□□□□□ -1.19
Ldlr-201ENSMUST00000034713 Col4a2P08122 1707 aa7.63□□□□□ -1.19
Ldlr-201ENSMUST00000034713 Lamtor3O88653 124 aa7.63□□□□□ -1.19
Ldlr-201ENSMUST00000034713 Lmo4P61969 165 aa7.63□□□□□ -1.19
Ldlr-201ENSMUST00000034713 AW146154Q3TPQ7 468 aa7.63□□□□□ -1.19
Ldlr-201ENSMUST00000034713 Ighv12-3A0A075B5T1 117 aa7.63□□□□□ -1.19
Ldlr-201ENSMUST00000034713 Inafm2A0A1L1STD6 152 aa7.63□□□□□ -1.19
Ldlr-201ENSMUST00000034713 Egr2P08152 470 aa7.63□□□□□ -1.19
Ldlr-201ENSMUST00000034713 Gatd1Q8BFQ8 220 aa7.63□□□□□ -1.19
Ldlr-201ENSMUST00000034713 Cdh23Q99PF4 3354 aa7.63□□□□□ -1.19
Ldlr-201ENSMUST00000034713 Igkv4-57-1A0A075B5M4 119 aa7.63□□□□□ -1.19
Ldlr-201ENSMUST00000034713 Samd13D3YUG0 102 aa7.63□□□□□ -1.19
Ldlr-201ENSMUST00000034713 Igkv1-99F6XWB2 120 aa7.63□□□□□ -1.19
Ldlr-201ENSMUST00000034713 Vmo1Q5SXG7 201 aa7.63□□□□□ -1.19
Ldlr-201ENSMUST00000034713 Ighv1-12A0A0A6YXJ9 117 aa7.62□□□□□ -1.19
Ldlr-201ENSMUST00000034713 Glrp1E9Q9S8 174 aa7.62□□□□□ -1.19
Ldlr-201ENSMUST00000034713 Setd2E9Q5F9 2537 aa7.62□□□□□ -1.19
Ldlr-201ENSMUST00000034713 Odf3l1Q810P2 275 aa7.62□□□□□ -1.19
Ldlr-201ENSMUST00000034713 P06330 118 aa7.62□□□□□ -1.19
Ldlr-201ENSMUST00000034713 BC048502Q80Y74 154 aa7.62□□□□□ -1.19
Ldlr-201ENSMUST00000034713 Ndufb4Q9CQC7 129 aa7.62□□□□□ -1.19
Ldlr-201ENSMUST00000034713 Igkv4-62A0A0G2JDW9 117 aa7.61□□□□□ -1.19
Ldlr-201ENSMUST00000034713 Spink10Q8CAC8 162 aa7.61□□□□□ -1.19
Ldlr-201ENSMUST00000034713 Tmem263Q9DAM7 115 aa7.61□□□□□ -1.19
Ldlr-201ENSMUST00000034713 Igkv4-53A0A0G2JFC6 119 aa7.61□□□□□ -1.19
Ldlr-201ENSMUST00000034713 Odf3Q920N1 254 aa7.61□□□□□ -1.19
Ldlr-201ENSMUST00000034713 Cryba4Q9JJV0 196 aa7.61□□□□□ -1.19
Ldlr-201ENSMUST00000034713 DscamQ9ERC8 2013 aa7.61□□□□□ -1.19
Ldlr-201ENSMUST00000034713 Ankhd1E9PUR0 2548 aaKnown RBP7.61□□□□□ -1.19
Ldlr-201ENSMUST00000034713 Ndufa12Q7TMF3 145 aaKnown RBP7.61□□□□□ -1.19
Ldlr-201ENSMUST00000034713 Gm9949Q8C9F4 104 aa7.61□□□□□ -1.19
Ldlr-201ENSMUST00000034713 Acyp1P56376 99 aa7.61□□□□□ -1.19
Ldlr-201ENSMUST00000034713 Gm9961Q8BNV2 113 aa7.61□□□□□ -1.19
Ldlr-201ENSMUST00000034713 C920008G01RikA0A0B4J1N1 112 aa7.6□□□□□ -1.19
Ldlr-201ENSMUST00000034713 Reg3gO09049 174 aa7.6□□□□□ -1.19
Ldlr-201ENSMUST00000034713 Zfand3Q497H0 227 aa7.6□□□□□ -1.19
Retrieved 100 of 22,080 RNA–protein pairs in 25.5 ms