RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Gm2564F6Z9S8 108 aa12.99□□□□□ -0.33
Col17a1-201ENSMUST00000026045 Gm20499D3Z4G5 72 aa12.98□□□□□ -0.33
Col17a1-201ENSMUST00000026045 Serp2Q6TAW2 65 aa12.98□□□□□ -0.33
Col17a1-201ENSMUST00000026045 P01658 132 aa12.97□□□□□ -0.33
Col17a1-201ENSMUST00000026045 Mlst8Q9DCJ1 326 aa12.97□□□□□ -0.33
Col17a1-201ENSMUST00000026045 Ighv8-5A0A0A6YY60 119 aa12.97□□□□□ -0.33
Col17a1-201ENSMUST00000026045 Igkv1-99F6XWB2 120 aa12.97□□□□□ -0.33
Col17a1-201ENSMUST00000026045 Fam222aQ6PGH4 453 aa12.97□□□□□ -0.33
Col17a1-201ENSMUST00000026045 Prpf8Q99PV0 2335 aaKnown RBP12.97□□□□□ -0.33
Col17a1-201ENSMUST00000026045 Rpl39P62892 51 aa12.97□□□□□ -0.33
Col17a1-201ENSMUST00000026045 Col8a2P25318 699 aa12.96□□□□□ -0.33
Col17a1-201ENSMUST00000026045 Ormdl1Q921I0 153 aa12.96□□□□□ -0.33
Col17a1-201ENSMUST00000026045 Igkv4-78A0A0A6YYE5 119 aa12.96□□□□□ -0.33
Col17a1-201ENSMUST00000026045 Golgb1E9PVZ8 3238 aa12.96□□□□□ -0.33
Col17a1-201ENSMUST00000026045 Tcf20Q9EPQ8 1987 aa12.96□□□□□ -0.33
Col17a1-201ENSMUST00000026045 BC048502Q80Y74 154 aa12.96□□□□□ -0.34
Col17a1-201ENSMUST00000026045 CstadQ9D245 104 aa12.96□□□□□ -0.34
Col17a1-201ENSMUST00000026045 Igkv8-16A0A0G2JDG9 121 aa12.95□□□□□ -0.34
Col17a1-201ENSMUST00000026045 Spink4O35679 86 aa12.95□□□□□ -0.34
Col17a1-201ENSMUST00000026045 Cela2aP05208 271 aa12.95□□□□□ -0.34
Col17a1-201ENSMUST00000026045 Dazap2Q9DCP9 168 aa12.95□□□□□ -0.34
Col17a1-201ENSMUST00000026045 Odf3l1Q810P2 275 aa12.95□□□□□ -0.34
Col17a1-201ENSMUST00000026045 P04940 107 aa12.95□□□□□ -0.34
Col17a1-201ENSMUST00000026045 P04941 107 aa12.95□□□□□ -0.34
Col17a1-201ENSMUST00000026045 BC048562Q80ZQ7 204 aa12.95□□□□□ -0.34
Col17a1-201ENSMUST00000026045 Pcnx3Q8VI59 2028 aa12.95□□□□□ -0.34
Col17a1-201ENSMUST00000026045 Bub3Q9WVA3 326 aa12.94□□□□□ -0.34
Col17a1-201ENSMUST00000026045 Trbv13-1A0A0B4J1P8 112 aa12.94□□□□□ -0.34
Col17a1-201ENSMUST00000026045 Ighv1-77A0A0G2JGS9 117 aa12.94□□□□□ -0.34
Col17a1-201ENSMUST00000026045 Ighv3-4A0A0A6YXF1 117 aa12.94□□□□□ -0.34
Col17a1-201ENSMUST00000026045 Ndufc1Q9CQY9 76 aa12.94□□□□□ -0.34
Col17a1-201ENSMUST00000026045 Gm19935A0A1B0GSF9 52 aa12.94□□□□□ -0.34
Col17a1-201ENSMUST00000026045 Gm3618D3Z4P5 127 aa12.94□□□□□ -0.34
Col17a1-201ENSMUST00000026045 Egr2P08152 470 aa12.94□□□□□ -0.34
Col17a1-201ENSMUST00000026045 Gm2916Q9D9B9 127 aa12.94□□□□□ -0.34
Col17a1-201ENSMUST00000026045 P01630 113 aa12.93□□□□□ -0.34
Col17a1-201ENSMUST00000026045 Rpl18aP62717 176 aaKnown RBP12.93□□□□□ -0.34
Col17a1-201ENSMUST00000026045 Heatr5aQ5PRF0 2038 aa12.93□□□□□ -0.34
Col17a1-201ENSMUST00000026045 HelzQ6DFV5 1964 aaKnown RBP12.93□□□□□ -0.34
Col17a1-201ENSMUST00000026045 Fam216bQ8CC14 138 aa12.93□□□□□ -0.34
Col17a1-201ENSMUST00000026045 LoxP28301 411 aa12.92□□□□□ -0.34
Col17a1-201ENSMUST00000026045 Csdc2Q91YQ3 154 aa12.92□□□□□ -0.34
Col17a1-201ENSMUST00000026045 Q9D131 166 aa12.92□□□□□ -0.34
Col17a1-201ENSMUST00000026045 Klk5Q9D140 293 aa12.92□□□□□ -0.34
Col17a1-201ENSMUST00000026045 Gp9O88186 177 aa12.92□□□□□ -0.34
Col17a1-201ENSMUST00000026045 Ighv3-6P18531 116 aa12.92□□□□□ -0.34
Col17a1-201ENSMUST00000026045 Minos1Q7TNS2 76 aa12.92□□□□□ -0.34
Col17a1-201ENSMUST00000026045 Igkv4-79A0A075B5L8 119 aa12.92□□□□□ -0.34
Col17a1-201ENSMUST00000026045 Igkv1-35A0A0G2JDE5 120 aa12.92□□□□□ -0.34
Col17a1-201ENSMUST00000026045 Trav14-1A0A0G2JF94 121 aa12.92□□□□□ -0.34
Col17a1-201ENSMUST00000026045 P06330 118 aa12.92□□□□□ -0.34
Col17a1-201ENSMUST00000026045 Dscaml1Q4VA61 2053 aa12.91□□□□□ -0.34
Col17a1-201ENSMUST00000026045 Fam19a4Q7TPG5 135 aa12.91□□□□□ -0.34
Col17a1-201ENSMUST00000026045 Gm9747Q810H1 104 aa12.91□□□□□ -0.34
Col17a1-201ENSMUST00000026045 Igkv4-74A0A0B4J1I3 119 aa12.91□□□□□ -0.34
Col17a1-201ENSMUST00000026045 Gm9970F6ZED4 185 aa12.91□□□□□ -0.34
Col17a1-201ENSMUST00000026045 Ighv1-52A0A0A6YXC3 117 aa12.9□□□□□ -0.34
Col17a1-201ENSMUST00000026045 Pla2g2eQ9QUL3 142 aa12.9□□□□□ -0.34
Col17a1-201ENSMUST00000026045 Snai3Q9QY31 287 aa12.9□□□□□ -0.34
Col17a1-201ENSMUST00000026045 Dph3Q8K0W9 82 aa12.89□□□□□ -0.35
Col17a1-201ENSMUST00000026045 Timm17bQ9Z0V7 172 aa12.89□□□□□ -0.35
Col17a1-201ENSMUST00000026045 Fam19a5Q91WE9 132 aa12.89□□□□□ -0.35
Col17a1-201ENSMUST00000026045 Synj2bpQ9D6K5 145 aa12.89□□□□□ -0.35
Col17a1-201ENSMUST00000026045 IgipA0A1B0GR74 53 aa12.89□□□□□ -0.35
Col17a1-201ENSMUST00000026045 Col6a4A2AX52 2309 aa12.89□□□□□ -0.35
Col17a1-201ENSMUST00000026045 Gm21060J3KMU4 56 aa12.89□□□□□ -0.35
Col17a1-201ENSMUST00000026045 Gm17324Q8C6J8 137 aa12.89□□□□□ -0.35
Col17a1-201ENSMUST00000026045 Ube2e2Q91W82 201 aa12.89□□□□□ -0.35
Col17a1-201ENSMUST00000026045 Ighv5-8A0A075B676 92 aa12.88□□□□□ -0.35
Col17a1-201ENSMUST00000026045 C1qcQ02105 246 aa12.88□□□□□ -0.35
Col17a1-201ENSMUST00000026045 P04942 107 aa12.88□□□□□ -0.35
Col17a1-201ENSMUST00000026045 1700010B08RikQ9DAI7 102 aa12.88□□□□□ -0.35
Col17a1-201ENSMUST00000026045 Ighv1-58A0A075B5W9 117 aa12.88□□□□□ -0.35
Col17a1-201ENSMUST00000026045 Gm5941Q497P9 117 aa12.88□□□□□ -0.35
Col17a1-201ENSMUST00000026045 SptssbQ925E8 76 aa12.88□□□□□ -0.35
Col17a1-201ENSMUST00000026045 NpwA0A1L1STR8 176 aa12.88□□□□□ -0.35
Col17a1-201ENSMUST00000026045 Spag11Q8K4N2 71 aa12.88□□□□□ -0.35
Col17a1-201ENSMUST00000026045 Crip1P63254 77 aa12.87□□□□□ -0.35
Col17a1-201ENSMUST00000026045 Cfap126Q6P8X9 189 aa12.87□□□□□ -0.35
Col17a1-201ENSMUST00000026045 Trav13n-1A0A0G2JEU8 110 aa12.87□□□□□ -0.35
Col17a1-201ENSMUST00000026045 A830031A19RikQ8BNT5 113 aa12.87□□□□□ -0.35
Col17a1-201ENSMUST00000026045 Trav13d-1A0A075B606 110 aa12.86□□□□□ -0.35
Col17a1-201ENSMUST00000026045 Edn3P48299 214 aa12.86□□□□□ -0.35
Col17a1-201ENSMUST00000026045 Usf3B2RUQ2 2221 aa12.86□□□□□ -0.35
Col17a1-201ENSMUST00000026045 Prp2P05143 317 aa12.86□□□□□ -0.35
Col17a1-201ENSMUST00000026045 Igkv2-109A0A075B5K6 120 aa12.85□□□□□ -0.35
Col17a1-201ENSMUST00000026045 Tmem263Q9DAM7 115 aa12.85□□□□□ -0.35
Col17a1-201ENSMUST00000026045 P01659 112 aa12.85□□□□□ -0.35
Col17a1-201ENSMUST00000026045 Vmo1Q5SXG7 201 aa12.85□□□□□ -0.35
Col17a1-201ENSMUST00000026045 EnhoQ8K1D8 76 aa12.84□□□□□ -0.35
Col17a1-201ENSMUST00000026045 Lyzl4Q9D925 145 aa12.84□□□□□ -0.35
Col17a1-201ENSMUST00000026045 Ncoa6Q9JL19 2067 aa12.84□□□□□ -0.35
Col17a1-201ENSMUST00000026045 TectaO08523 2155 aa12.84□□□□□ -0.35
Col17a1-201ENSMUST00000026045 OdaphJ3QNT8 126 aa12.84□□□□□ -0.35
Col17a1-201ENSMUST00000026045 Sh2d1aO88890 126 aa12.84□□□□□ -0.35
Col17a1-201ENSMUST00000026045 P18527 97 aa12.84□□□□□ -0.35
Col17a1-201ENSMUST00000026045 Smim1P0C8K7 78 aa12.83□□□□□ -0.35
Col17a1-201ENSMUST00000026045 1500011B03RikQ3TTH7 73 aa12.83□□□□□ -0.35
Col17a1-201ENSMUST00000026045 Gm815Q3UWS2 115 aa12.83□□□□□ -0.36
Col17a1-201ENSMUST00000026045 Notch3Q61982 2318 aa12.82□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 54.3 ms