RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Ndufa1O35683 70 aa8.35□□□□□ -1.07
Msh3-201ENSMUST00000022220 Klk1b4P00757 256 aa8.35□□□□□ -1.07
Msh3-201ENSMUST00000022220 CrygbP04344 175 aa8.35□□□□□ -1.07
Msh3-201ENSMUST00000022220 Zfand3Q497H0 227 aa8.35□□□□□ -1.07
Msh3-201ENSMUST00000022220 Gm867A0A1W2P7T4 151 aa8.34□□□□□ -1.07
Msh3-201ENSMUST00000022220 Smim20D3Z7Q2 69 aa8.34□□□□□ -1.07
Msh3-201ENSMUST00000022220 Tcrg-C3L7N479 172 aa8.34□□□□□ -1.07
Msh3-201ENSMUST00000022220 P03985 172 aa8.34□□□□□ -1.07
Msh3-201ENSMUST00000022220 Cox6b1P56391 86 aaKnown RBP8.34□□□□□ -1.07
Msh3-201ENSMUST00000022220 Olfr312Q7TRZ9 308 aa8.34□□□□□ -1.07
Msh3-201ENSMUST00000022220 Gemin7Q9CWY4 129 aa8.34□□□□□ -1.07
Msh3-201ENSMUST00000022220 Arhgap32Q811P8 2089 aa8.34□□□□□ -1.07
Msh3-201ENSMUST00000022220 Hspe1Q64433 102 aaKnown RBP8.34□□□□□ -1.07
Msh3-201ENSMUST00000022220 Foxi1Q922I5 372 aa8.34□□□□□ -1.07
Msh3-201ENSMUST00000022220 DspE9Q557 2883 aaKnown RBP8.34□□□□□ -1.07
Msh3-201ENSMUST00000022220 Gm933J3QPC1 141 aa8.34□□□□□ -1.08
Msh3-201ENSMUST00000022220 P04944 107 aa8.34□□□□□ -1.08
Msh3-201ENSMUST00000022220 RelnQ60841 3461 aa8.33□□□□□ -1.08
Msh3-201ENSMUST00000022220 Rtl10D3YWW5 146 aa8.33□□□□□ -1.08
Msh3-201ENSMUST00000022220 Gm7257D3YX25 99 aa8.33□□□□□ -1.08
Msh3-201ENSMUST00000022220 Spink1P09036 80 aa8.33□□□□□ -1.08
Msh3-201ENSMUST00000022220 Ormdl2Q9CQZ0 153 aa8.33□□□□□ -1.08
Msh3-201ENSMUST00000022220 Ss18l2Q9D174 77 aa8.33□□□□□ -1.08
Msh3-201ENSMUST00000022220 Tmem89Q9DA04 169 aa8.33□□□□□ -1.08
Msh3-201ENSMUST00000022220 Gm33815A0A087WNV3 176 aa8.33□□□□□ -1.08
Msh3-201ENSMUST00000022220 Gm17732E9Q5I2 61 aa8.33□□□□□ -1.08
Msh3-201ENSMUST00000022220 Gm28038F7BCN9 126 aa8.33□□□□□ -1.08
Msh3-201ENSMUST00000022220 Defa16P50714 93 aa8.33□□□□□ -1.08
Msh3-201ENSMUST00000022220 Trav7d-3Q5R1I1 112 aa8.33□□□□□ -1.08
Msh3-201ENSMUST00000022220 Fam110dQ80X91 271 aa8.33□□□□□ -1.08
Msh3-201ENSMUST00000022220 SNORCQ9CXL7 121 aa8.33□□□□□ -1.08
Msh3-201ENSMUST00000022220 Trav3-4A0A075B654 114 aa8.33□□□□□ -1.08
Msh3-201ENSMUST00000022220 Igkv4-57A0A0A6YYE7 117 aa8.33□□□□□ -1.08
Msh3-201ENSMUST00000022220 Gm44965A0A0N4SVR3 59 aa8.33□□□□□ -1.08
Msh3-201ENSMUST00000022220 Gm26566Q8CAC1 153 aa8.33□□□□□ -1.08
Msh3-201ENSMUST00000022220 Rasl10aQ8K5A4 203 aa8.33□□□□□ -1.08
Msh3-201ENSMUST00000022220 Shisa9Q9CZN4 424 aa8.33□□□□□ -1.08
Msh3-201ENSMUST00000022220 Bub3Q9WVA3 326 aa8.33□□□□□ -1.08
Msh3-201ENSMUST00000022220 Reg3gO09049 174 aa8.32□□□□□ -1.08
Msh3-201ENSMUST00000022220 MsmbO08540 113 aa8.32□□□□□ -1.08
Msh3-201ENSMUST00000022220 Gm26938S4R185 226 aa8.32□□□□□ -1.08
Msh3-201ENSMUST00000022220 Tex26Q0VB26 296 aa8.32□□□□□ -1.08
Msh3-201ENSMUST00000022220 SvipQ3UZP4 77 aa8.32□□□□□ -1.08
Msh3-201ENSMUST00000022220 4930596D02RikQ3V0H9 216 aa8.32□□□□□ -1.08
Msh3-201ENSMUST00000022220 Ubr5Q80TP3 2792 aa8.31□□□□□ -1.08
Msh3-201ENSMUST00000022220 Spink13Q3UTS8 97 aa8.31□□□□□ -1.08
Msh3-201ENSMUST00000022220 Igkv4-57-1A0A075B5M4 119 aa8.31□□□□□ -1.08
Msh3-201ENSMUST00000022220 Trav9-2A0A075B647 113 aa8.31□□□□□ -1.08
Msh3-201ENSMUST00000022220 Trav9-4A0A0B4J1K2 113 aa8.31□□□□□ -1.08
Msh3-201ENSMUST00000022220 P01811 117 aa8.31□□□□□ -1.08
Msh3-201ENSMUST00000022220 Srsf2Q62093 221 aaKnown RBP8.31□□□□□ -1.08
Msh3-201ENSMUST00000022220 Ifi27l2aQ8R412 90 aa8.31□□□□□ -1.08
Msh3-201ENSMUST00000022220 Klk5Q9D140 293 aa8.31□□□□□ -1.08
Msh3-201ENSMUST00000022220 Ankrd17Q99NH0 2603 aaKnown RBP8.31□□□□□ -1.08
Msh3-201ENSMUST00000022220 Igkv2-137A0A0B4J1H6 120 aa8.3□□□□□ -1.08
Msh3-201ENSMUST00000022220 Trbv30A0A0B4J1P1 111 aa8.3□□□□□ -1.08
Msh3-201ENSMUST00000022220 Cfc1P97766 202 aa8.3□□□□□ -1.08
Msh3-201ENSMUST00000022220 Cysltr1Q99JA4 352 aa8.3□□□□□ -1.08
Msh3-201ENSMUST00000022220 Erdr1J3QMM0 206 aa8.3□□□□□ -1.08
Msh3-201ENSMUST00000022220 Dpm2Q9Z324 84 aa8.3□□□□□ -1.08
Msh3-201ENSMUST00000022220 Usp24B1AY13 2617 aaKnown RBP8.3□□□□□ -1.08
Msh3-201ENSMUST00000022220 Gm42674D3YUT9 64 aa8.29□□□□□ -1.08
Msh3-201ENSMUST00000022220 Ss18Q62280 418 aa8.29□□□□□ -1.08
Msh3-201ENSMUST00000022220 4930544G11RikQ9CR99 193 aa8.29□□□□□ -1.08
Msh3-201ENSMUST00000022220 Gp9O88186 177 aa8.29□□□□□ -1.08
Msh3-201ENSMUST00000022220 Smim10l1A0A087WNQ7 89 aa8.28□□□□□ -1.08
Msh3-201ENSMUST00000022220 Rpl36-ps4A0A140T8U4 117 aa8.28□□□□□ -1.08
Msh3-201ENSMUST00000022220 Sumo2P61957 95 aaKnown RBP8.28□□□□□ -1.08
Msh3-201ENSMUST00000022220 Il1f10Q8R459 152 aa8.28□□□□□ -1.08
Msh3-201ENSMUST00000022220 Gm29423A0A087WRM1 55 aa8.28□□□□□ -1.08
Msh3-201ENSMUST00000022220 Smlr1J3QMJ4 66 aa8.28□□□□□ -1.08
Msh3-201ENSMUST00000022220 Fam222aQ6PGH4 453 aa8.28□□□□□ -1.08
Msh3-201ENSMUST00000022220 Tspan13Q9D8C2 204 aa8.28□□□□□ -1.08
Msh3-201ENSMUST00000022220 2310009B15RikA0A0A6YWI4 143 aa8.28□□□□□ -1.08
Msh3-201ENSMUST00000022220 Ighv8-12A0A0G2JDE1 119 aa8.28□□□□□ -1.08
Msh3-201ENSMUST00000022220 4930447F04RikA2AFR2 126 aa8.28□□□□□ -1.08
Msh3-201ENSMUST00000022220 Ovol3D3YYM0 189 aa8.28□□□□□ -1.08
Msh3-201ENSMUST00000022220 Vwc2lQ505H4 222 aa8.28□□□□□ -1.08
Msh3-201ENSMUST00000022220 PmvkQ9D1G2 192 aa8.28□□□□□ -1.08
Msh3-201ENSMUST00000022220 HampQ9EQ21 83 aa8.28□□□□□ -1.08
Msh3-201ENSMUST00000022220 P01802 115 aa8.27□□□□□ -1.08
Msh3-201ENSMUST00000022220 Dmrt3Q80WT2 476 aa8.27□□□□□ -1.08
Msh3-201ENSMUST00000022220 Phlda3Q9WV95 125 aa8.27□□□□□ -1.08
Msh3-201ENSMUST00000022220 P01739 132 aa8.27□□□□□ -1.09
Msh3-201ENSMUST00000022220 P01820 115 aa8.27□□□□□ -1.09
Msh3-201ENSMUST00000022220 P18527 97 aa8.27□□□□□ -1.09
Msh3-201ENSMUST00000022220 Gm10767Q3TQP0 103 aa8.27□□□□□ -1.09
Msh3-201ENSMUST00000022220 Chchd5Q9CQP3 110 aa8.27□□□□□ -1.09
Msh3-201ENSMUST00000022220 P01750 117 aa8.27□□□□□ -1.09
Msh3-201ENSMUST00000022220 BC048562Q80ZQ7 204 aa8.27□□□□□ -1.09
Msh3-201ENSMUST00000022220 Rnf185Q91YT2 192 aa8.27□□□□□ -1.09
Msh3-201ENSMUST00000022220 Q9CX25 107 aa8.27□□□□□ -1.09
Msh3-201ENSMUST00000022220 Ighv3-1A0A075B5S6 116 aa8.26□□□□□ -1.09
Msh3-201ENSMUST00000022220 Ighv1-64A0A075B5X3 117 aa8.26□□□□□ -1.09
Msh3-201ENSMUST00000022220 Gm28539A0A087WSL9 92 aa8.26□□□□□ -1.09
Msh3-201ENSMUST00000022220 Trbv13-1A0A0B4J1P8 112 aa8.26□□□□□ -1.09
Msh3-201ENSMUST00000022220 PlaurP35456 327 aa8.26□□□□□ -1.09
Msh3-201ENSMUST00000022220 March3Q8BRX9 218 aa8.26□□□□□ -1.09
Msh3-201ENSMUST00000022220 Ighv1-12A0A0A6YXJ9 117 aa8.26□□□□□ -1.09
Msh3-201ENSMUST00000022220 Ighv1-77A0A0G2JGS9 117 aa8.26□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 81 ms