RNA–Protein interactions for RNA: ENSMUST00000005600.5

Rfx1-201, Transcript of MHC class II regulatory factor RFX1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rfx1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1-201ENSMUST00000005600 Cela2aP05208 271 aa9.07□□□□□ -0.96
Rfx1-201ENSMUST00000005600 Triap1Q9D8Z2 76 aa9.07□□□□□ -0.96
Rfx1-201ENSMUST00000005600 Ighv8-5A0A0A6YY60 119 aa9.06□□□□□ -0.96
Rfx1-201ENSMUST00000005600 SrarpQ3ULG3 163 aa9.06□□□□□ -0.96
Rfx1-201ENSMUST00000005600 Ifitm10Q8BR26 201 aa9.06□□□□□ -0.96
Rfx1-201ENSMUST00000005600 Prpf8Q99PV0 2335 aaKnown RBP9.06□□□□□ -0.96
Rfx1-201ENSMUST00000005600 P06328 117 aa9.06□□□□□ -0.96
Rfx1-201ENSMUST00000005600 Defa26Q3L180 93 aa9.06□□□□□ -0.96
Rfx1-201ENSMUST00000005600 Ighv1-64A0A075B5X3 117 aa9.06□□□□□ -0.96
Rfx1-201ENSMUST00000005600 Ighv3-3A0A0A6YWL2 116 aa9.06□□□□□ -0.96
Rfx1-201ENSMUST00000005600 Gm35549A0A0N4SUS7 141 aa9.06□□□□□ -0.96
Rfx1-201ENSMUST00000005600 Smim20D3Z7Q2 69 aa9.06□□□□□ -0.96
Rfx1-201ENSMUST00000005600 Lmo4P61969 165 aa9.06□□□□□ -0.96
Rfx1-201ENSMUST00000005600 BC106179Q8C9L1 186 aa9.06□□□□□ -0.96
Rfx1-201ENSMUST00000005600 Gm933J3QPC1 141 aa9.05□□□□□ -0.96
Rfx1-201ENSMUST00000005600 4930596D02RikQ3V0H9 216 aa9.05□□□□□ -0.96
Rfx1-201ENSMUST00000005600 Higd1aQ9JLR9 95 aa9.05□□□□□ -0.96
Rfx1-201ENSMUST00000005600 AcacbE9Q4Z2 2448 aa9.05□□□□□ -0.96
Rfx1-201ENSMUST00000005600 Gm10521E9PZK0 135 aa9.05□□□□□ -0.96
Rfx1-201ENSMUST00000005600 Gm2564F6Z9S8 108 aa9.05□□□□□ -0.96
Rfx1-201ENSMUST00000005600 Atp5lQ9CPQ8 103 aa9.05□□□□□ -0.96
Rfx1-201ENSMUST00000005600 Prr13Q9CQJ5 137 aa9.05□□□□□ -0.96
Rfx1-201ENSMUST00000005600 Ndufa11Q9D8B4 141 aa9.05□□□□□ -0.96
Rfx1-201ENSMUST00000005600 Ighv1-50A0A075B5W1 117 aa9.05□□□□□ -0.96
Rfx1-201ENSMUST00000005600 Tcte2E9PY37 120 aa9.05□□□□□ -0.96
Rfx1-201ENSMUST00000005600 P01820 115 aa9.05□□□□□ -0.96
Rfx1-201ENSMUST00000005600 3110018I06RikQ9CXS0 120 aa9.05□□□□□ -0.96
Rfx1-201ENSMUST00000005600 Runx1Q03347 451 aa9.04□□□□□ -0.96
Rfx1-201ENSMUST00000005600 Col6a4A2AX52 2309 aa9.04□□□□□ -0.96
Rfx1-201ENSMUST00000005600 F11rO88792 300 aa9.04□□□□□ -0.96
Rfx1-201ENSMUST00000005600 1500011B03RikQ3TTH7 73 aa9.04□□□□□ -0.96
Rfx1-201ENSMUST00000005600 Lyzl4Q9D925 145 aa9.04□□□□□ -0.96
Rfx1-201ENSMUST00000005600 Ss18Q62280 418 aa9.04□□□□□ -0.96
Rfx1-201ENSMUST00000005600 Xlr5cQ9JJR2 179 aa9.04□□□□□ -0.96
Rfx1-201ENSMUST00000005600 P01811 117 aa9.03□□□□□ -0.96
Rfx1-201ENSMUST00000005600 Gm867A0A1W2P7T4 151 aa9.03□□□□□ -0.96
Rfx1-201ENSMUST00000005600 Ube2d3P61079 147 aa9.03□□□□□ -0.96
Rfx1-201ENSMUST00000005600 Ube2d2P62838 147 aa9.03□□□□□ -0.96
Rfx1-201ENSMUST00000005600 1700020N15RikL7MTX3 112 aa9.02□□□□□ -0.96
Rfx1-201ENSMUST00000005600 Polr2kQ63871 58 aa9.02□□□□□ -0.96
Rfx1-201ENSMUST00000005600 Gm9961Q8BNV2 113 aa9.02□□□□□ -0.96
Rfx1-201ENSMUST00000005600 Ndufb4Q9CQC7 129 aa9.02□□□□□ -0.97
Rfx1-201ENSMUST00000005600 C920008G01RikA0A0B4J1N1 112 aa9.02□□□□□ -0.97
Rfx1-201ENSMUST00000005600 Trbv17A0A140T8P8 114 aa9.02□□□□□ -0.97
Rfx1-201ENSMUST00000005600 Rpl32P62911 135 aaKnown RBP9.02□□□□□ -0.97
Rfx1-201ENSMUST00000005600 Cfc1P97766 202 aa9.02□□□□□ -0.97
Rfx1-201ENSMUST00000005600 Il1f10Q8R459 152 aa9.02□□□□□ -0.97
Rfx1-201ENSMUST00000005600 Hcfc1Q61191 2045 aaKnown RBP9.02□□□□□ -0.97
Rfx1-201ENSMUST00000005600 Dido1Q8C9B9 2256 aaKnown RBP9.02□□□□□ -0.97
Rfx1-201ENSMUST00000005600 NbasE9Q411 2356 aa9.02□□□□□ -0.97
Rfx1-201ENSMUST00000005600 P01726 129 aa9.02□□□□□ -0.97
Rfx1-201ENSMUST00000005600 Usmg5Q78IK2 58 aa9.02□□□□□ -0.97
Rfx1-201ENSMUST00000005600 Esp24A8R0V6 68 aa9.01□□□□□ -0.97
Rfx1-201ENSMUST00000005600 Gm20499D3Z4G5 72 aa9.01□□□□□ -0.97
Rfx1-201ENSMUST00000005600 Timm17aQ9Z0V8 171 aa9.01□□□□□ -0.97
Rfx1-201ENSMUST00000005600 Ighv1-66A0A075B5X5 117 aa9.01□□□□□ -0.97
Rfx1-201ENSMUST00000005600 Prr9Q8BV84 116 aa9.01□□□□□ -0.97
Rfx1-201ENSMUST00000005600 Fam208bQ5DTT3 2382 aa9.01□□□□□ -0.97
Rfx1-201ENSMUST00000005600 LhbO09108 141 aa9.01□□□□□ -0.97
Rfx1-201ENSMUST00000005600 Lyrm7Q9DA03 104 aa9.01□□□□□ -0.97
Rfx1-201ENSMUST00000005600 Cdip1Q9DB75 208 aa9.01□□□□□ -0.97
Rfx1-201ENSMUST00000005600 Trank1Q8BV79 2999 aa9□□□□□ -0.97
Rfx1-201ENSMUST00000005600 Ash1lQ99MY8 2958 aa9□□□□□ -0.97
Rfx1-201ENSMUST00000005600 Gm11444F6QMA6 170 aa9□□□□□ -0.97
Rfx1-201ENSMUST00000005600 Hoxd3P09027 433 aa9□□□□□ -0.97
Rfx1-201ENSMUST00000005600 Sptbn4E9PX29 2561 aa9□□□□□ -0.97
Rfx1-201ENSMUST00000005600 Trbv16A0A0B4J1H3 115 aa8.99□□□□□ -0.97
Rfx1-201ENSMUST00000005600 Lect2O88803 151 aa8.99□□□□□ -0.97
Rfx1-201ENSMUST00000005600 BlcapP62951 87 aa8.99□□□□□ -0.97
Rfx1-201ENSMUST00000005600 C1qcQ02105 246 aa8.99□□□□□ -0.97
Rfx1-201ENSMUST00000005600 Akap6E9Q9K8 2307 aa8.99□□□□□ -0.97
Rfx1-201ENSMUST00000005600 TtrP07309 147 aa8.99□□□□□ -0.97
Rfx1-201ENSMUST00000005600 Snrpd3P62320 126 aaKnown RBP8.99□□□□□ -0.97
Rfx1-201ENSMUST00000005600 BC025920Q3US60 128 aa8.99□□□□□ -0.97
Rfx1-201ENSMUST00000005600 Gm28539A0A087WSL9 92 aa8.99□□□□□ -0.97
Rfx1-201ENSMUST00000005600 Edn2P22389 175 aa8.99□□□□□ -0.97
Rfx1-201ENSMUST00000005600 Gphb5Q812B2 130 aa8.99□□□□□ -0.97
Rfx1-201ENSMUST00000005600 PspnO70300 156 aa8.98□□□□□ -0.97
Rfx1-201ENSMUST00000005600 P01802 115 aa8.98□□□□□ -0.97
Rfx1-201ENSMUST00000005600 Morn5Q9DAI9 170 aa8.98□□□□□ -0.97
Rfx1-201ENSMUST00000005600 Ighv1-12A0A0A6YXJ9 117 aa8.98□□□□□ -0.97
Rfx1-201ENSMUST00000005600 LeprotO89013 131 aa8.98□□□□□ -0.97
Rfx1-201ENSMUST00000005600 FcorP0DJI6 106 aa8.98□□□□□ -0.97
Rfx1-201ENSMUST00000005600 Rpl32-psP17932 135 aa8.98□□□□□ -0.97
Rfx1-201ENSMUST00000005600 Mpv17l2Q8VIK2 200 aa8.98□□□□□ -0.97
Rfx1-201ENSMUST00000005600 Mrpl35Q9CQL6 188 aa8.98□□□□□ -0.97
Rfx1-201ENSMUST00000005600 Ss18l2Q9D174 77 aa8.98□□□□□ -0.97
Rfx1-201ENSMUST00000005600 Sorl1O88307 2215 aaKnown RBP8.98□□□□□ -0.97
Rfx1-201ENSMUST00000005600 PkigO70139 76 aa8.98□□□□□ -0.97
Rfx1-201ENSMUST00000005600 P01643 108 aa8.98□□□□□ -0.97
Rfx1-201ENSMUST00000005600 Ankrd39Q9D2X0 183 aa8.98□□□□□ -0.97
Rfx1-201ENSMUST00000005600 Lce6aD3YV94 81 aa8.97□□□□□ -0.97
Rfx1-201ENSMUST00000005600 Samd5Q3V1H9 173 aa8.97□□□□□ -0.97
Rfx1-201ENSMUST00000005600 Smg1Q8BKX6 3658 aaKnown RBP8.97□□□□□ -0.97
Rfx1-201ENSMUST00000005600 Spink10Q8CAC8 162 aa8.97□□□□□ -0.97
Rfx1-201ENSMUST00000005600 Trav7d-3Q5R1I1 112 aa8.97□□□□□ -0.97
Rfx1-201ENSMUST00000005600 Spag11Q8K4N2 71 aa8.97□□□□□ -0.97
Rfx1-201ENSMUST00000005600 AY761184Q9D848 116 aa8.96□□□□□ -0.97
Rfx1-201ENSMUST00000005600 Igkv4-69A0A0B4J1I6 116 aa8.96□□□□□ -0.98
Rfx1-201ENSMUST00000005600 Gm6793B2RXM2 351 aa8.96□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 32.8 ms