RNA–Protein interactions for RNA: ENSMUST00000213114.1

Ldlr-202, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,318 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-202ENSMUST00000213114 Dmrt3Q80WT2 476 aa7.34□□□□□ -1.23
Ldlr-202ENSMUST00000213114 GalmQ8K157 342 aa7.34□□□□□ -1.23
Ldlr-202ENSMUST00000213114 SNORCQ9CXL7 121 aa7.34□□□□□ -1.23
Ldlr-202ENSMUST00000213114 Hrct1Q9D6B9 109 aa7.34□□□□□ -1.23
Ldlr-202ENSMUST00000213114 PtprbB2RU80 1998 aa7.34□□□□□ -1.23
Ldlr-202ENSMUST00000213114 Gm9513B3GLJ6 99 aa7.34□□□□□ -1.23
Ldlr-202ENSMUST00000213114 P06330 118 aa7.34□□□□□ -1.23
Ldlr-202ENSMUST00000213114 Trav14-2A0A075B694 121 aa7.34□□□□□ -1.23
Ldlr-202ENSMUST00000213114 Gm20481G3UXK4 153 aa7.34□□□□□ -1.23
Ldlr-202ENSMUST00000213114 Spag11Q8K4N2 71 aa7.34□□□□□ -1.23
Ldlr-202ENSMUST00000213114 Tax1bp3Q9DBG9 124 aa7.34□□□□□ -1.23
Ldlr-202ENSMUST00000213114 Gm10767Q3TQP0 103 aa7.33□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Taf15Q8BQ46 557 aaKnown RBP7.33□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Trav6-6A0A075B603 114 aa7.33□□□□□ -1.24
Ldlr-202ENSMUST00000213114 P01794 123 aa7.33□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Gm10553J3QPF1 123 aa7.33□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Defa25Q5G864 92 aa7.33□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Gm9913Q8BQQ2 135 aa7.33□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Gm26727M0QWT1 121 aa7.33□□□□□ -1.24
Ldlr-202ENSMUST00000213114 P01741 114 aa7.33□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Ang4Q3TMQ6 144 aa7.33□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Sdhaf1Q3U276 118 aa7.33□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Samd5Q3V1H9 173 aa7.33□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Ighv1-77A0A0G2JGS9 117 aa7.32□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Ndufa4Q62425 82 aaKnown RBP7.32□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Olfr312Q7TRZ9 308 aa7.32□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Gm5468Q8C3D3 155 aa7.32□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Ighv1-23A0A0A6YVW3 117 aa7.32□□□□□ -1.24
Ldlr-202ENSMUST00000213114 CckP09240 115 aa7.32□□□□□ -1.24
Ldlr-202ENSMUST00000213114 4930596D02RikQ3V0H9 216 aa7.32□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Fam110dQ80X91 271 aa7.32□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Tomm6Q9CQN3 74 aa7.32□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Ccl24Q9JKC0 119 aa7.32□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Gm867A0A1W2P7T4 151 aa7.32□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Gm11020F6ZGD5 61 aa7.32□□□□□ -1.24
Ldlr-202ENSMUST00000213114 P01811 117 aa7.32□□□□□ -1.24
Ldlr-202ENSMUST00000213114 ColqO35348 457 aa7.31□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Tal2Q62282 108 aa7.31□□□□□ -1.24
Ldlr-202ENSMUST00000213114 P01896 185 aa7.31□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Gm5941Q497P9 117 aa7.31□□□□□ -1.24
Ldlr-202ENSMUST00000213114 E130116L18RikQ8BMV6 101 aa7.31□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Ifi27l2aQ8R412 90 aa7.31□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Bex1Q9R224 128 aa7.31□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Brd3osA0A1B0GRB6 84 aa7.31□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Gm15557A6PWY0 234 aa7.31□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Edn1P22387 202 aa7.31□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Cysltr1Q99JA4 352 aa7.31□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Rev3lQ61493 3122 aa7.31□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Szt2A2A9C3 3431 aa7.31□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Reg3gO09049 174 aa7.31□□□□□ -1.24
Ldlr-202ENSMUST00000213114 P01756 117 aa7.31□□□□□ -1.24
Ldlr-202ENSMUST00000213114 P01757 117 aa7.31□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Defa4P28311 92 aa7.31□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Zfand3Q497H0 227 aa7.31□□□□□ -1.24
Ldlr-202ENSMUST00000213114 AcanQ61282 2132 aaKnown RBP7.31□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Ly6g5bQ8K1T4 194 aa7.31□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Wfdc15bQ9JHY4 80 aa7.31□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Leap2Q91V13 76 aa7.3□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Gemin7Q9CWY4 129 aa7.3□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Dpm2Q9Z324 84 aa7.3□□□□□ -1.24
Ldlr-202ENSMUST00000213114 FlnbQ80X90 2602 aaKnown RBP7.3□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Igkv4-57-1A0A075B5M4 119 aa7.3□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Gm6793B2RXM2 351 aa7.3□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Defa28D3Z1V9 94 aa7.3□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Klk1b4P00757 256 aa7.3□□□□□ -1.24
Ldlr-202ENSMUST00000213114 P01739 132 aa7.3□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Hoxb4P10284 250 aa7.3□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Gm7489Q3UT34 171 aa7.3□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Ighv1-64A0A075B5X3 117 aa7.3□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Gm17359A0A0G2JEB7 487 aa7.3□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Ccl25O35903 144 aa7.3□□□□□ -1.24
Ldlr-202ENSMUST00000213114 P01748 117 aa7.3□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Hbb-b2P02089 147 aa7.3□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Ighv1-49A0A0A6YWX2 117 aa7.29□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Tcrg-C3L7N479 172 aa7.29□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Mrps12O35680 139 aa7.29□□□□□ -1.24
Ldlr-202ENSMUST00000213114 P03985 172 aa7.29□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Prss58Q8BW11 241 aa7.29□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Gm9944Q8C559 102 aa7.29□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Ndufa3Q9CQ91 84 aa7.29□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Tomm7Q9D173 55 aa7.29□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Gm15294V9GXA7 121 aa7.29□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Tcrg-C1A0A075B5Z0 172 aa7.29□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Cox11Q6P8I6 275 aa7.29□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Foxi1Q922I5 372 aa7.29□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Wfdc2Q9DAU7 174 aa7.29□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Ighv3-1A0A075B5S6 116 aa7.29□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Smim10l1A0A087WNQ7 89 aa7.29□□□□□ -1.24
Ldlr-202ENSMUST00000213114 UrahQ9CRB3 118 aa7.29□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Kiaa1549Q68FD9 1940 aa7.29□□□□□ -1.24
Ldlr-202ENSMUST00000213114 P01750 117 aa7.28□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Lmo4P61969 165 aa7.28□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Runx1Q03347 451 aa7.28□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Morn3Q8C5T4 241 aa7.28□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Gm5089A1L3C8 106 aa7.28□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Rasl10aQ8K5A4 203 aa7.28□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Ighv1-50A0A075B5W1 117 aa7.28□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Pla2g2cP48076 150 aa7.28□□□□□ -1.24
Ldlr-202ENSMUST00000213114 NpyP57774 97 aa7.28□□□□□ -1.24
Ldlr-202ENSMUST00000213114 Rpl36aP83882 106 aaKnown RBP7.28□□□□□ -1.24
Retrieved 100 of 22,080 RNA–protein pairs in 37.1 ms