RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 COA4Q8BT51 87 aa7.34□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Tcf24V9GWT9 166 aa7.34□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Ighv1-19A0A0A6YWX0 117 aa7.34□□□□□ -1.23
Scn8a-213ENSMUST00000201549 H2al2bA9Z055 111 aa7.34□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Tex26Q0VB26 296 aa7.34□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Fam110aQ8R184 296 aa7.34□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Iglv1A0A075B663 117 aa7.34□□□□□ -1.24
Scn8a-213ENSMUST00000201549 MsmpB1AWI6 139 aa7.34□□□□□ -1.24
Scn8a-213ENSMUST00000201549 LeprotO89013 131 aa7.34□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Ormdl2Q9CQZ0 153 aa7.34□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Gm26558Q8BLW8 286 aa7.33□□□□□ -1.24
Scn8a-213ENSMUST00000201549 4933414I15RikQ9D4D5 133 aa7.33□□□□□ -1.24
Scn8a-213ENSMUST00000201549 U90926O08546 118 aa7.33□□□□□ -1.24
Scn8a-213ENSMUST00000201549 9130213A22RikQ3V3T2 120 aa7.33□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Igkv3-4A0A140T8Q4 119 aa7.33□□□□□ -1.24
Scn8a-213ENSMUST00000201549 H2al1kJ3QP08 105 aa7.33□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Ang5Q5GAN1 145 aa7.33□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Edn1P22387 202 aa7.33□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Cox8bP48772 70 aa7.33□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Gm10188Q3V432 135 aa7.32□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Morn3Q8C5T4 241 aa7.32□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Fhl1P97447 280 aaKnown RBP7.32□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Dand5Q76LW6 185 aa7.32□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Rpl18aP62717 176 aaKnown RBP7.32□□□□□ -1.24
Scn8a-213ENSMUST00000201549 OtosQ8R448 89 aa7.32□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Dazap2Q9DCP9 168 aa7.32□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Spry4Q9WTP2 300 aa7.32□□□□□ -1.24
Scn8a-213ENSMUST00000201549 H2al1mQ9DAD9 105 aa7.32□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Esm1Q9QYY7 184 aa7.32□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Cela2aP05208 271 aa7.32□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Gm11733Q8BQP1 125 aa7.32□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Igkv8-18A0A0B4J1J3 123 aa7.31□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Mrps21P58059 87 aa7.31□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Defb30Q30KN4 75 aa7.31□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Gm815Q3UWS2 115 aa7.31□□□□□ -1.24
Scn8a-213ENSMUST00000201549 P01791 123 aa7.31□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Ubl5Q9EPV8 73 aa7.31□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Loxl1P97873 607 aa7.31□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Ighv1-55A0A075B5W6 117 aa7.31□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Igkv3-12A0A140T8P0 119 aa7.31□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Ly6g5bQ8K1T4 194 aa7.31□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Mustn1Q99JI1 82 aa7.31□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Ndufa12Q7TMF3 145 aaKnown RBP7.31□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Pcsk5Q04592 1877 aa7.31□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Ighv1-62-2A0A0A6YXZ4 119 aa7.3□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Wfdc11A2A5H7 82 aa7.3□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Fstl3Q9EQC7 256 aa7.3□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Arhgef17Q80U35 2057 aa7.3□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Sec16aA2AIX1 2377 aa7.3□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Ighv3-6P18531 116 aa7.3□□□□□ -1.24
Scn8a-213ENSMUST00000201549 CrygbP04344 175 aa7.3□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Ighv6-7A0A0A6YWU3 119 aa7.3□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Hoxb4P10284 250 aa7.3□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Tmem263Q9DAM7 115 aa7.3□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Ovol1Q9WTJ2 267 aa7.3□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Lama3Q61789 3330 aa7.3□□□□□ -1.24
Scn8a-213ENSMUST00000201549 CrygdP04342 174 aa7.3□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Vpreb1P13372 142 aa7.3□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Ang2Q64438 145 aa7.3□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Igkv19-93A0A0G2JFZ3 115 aa7.3□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Wt1P22561 449 aa7.3□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Ndufc2Q9CQ54 120 aa7.3□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Fam208bQ5DTT3 2382 aa7.29□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Gm26938S4R185 226 aa7.29□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Tns1E9Q0S6 1888 aaKnown RBP7.29□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Dido1Q8C9B9 2256 aaKnown RBP7.29□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Gm17472A0A075B683 117 aa7.29□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Gm5294J3QP53 216 aa7.29□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Zfp36l1P23950 338 aa7.29□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Cd24P24807 76 aa7.29□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Q08AU9 97 aa7.29□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Fancd2osQ9D4K4 178 aa7.29□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Trav9d-3A0A075B695 113 aa7.29□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Trav12d-3A0A075B6A4 115 aa7.29□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Gm20379A0A087WR34 119 aa7.29□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Vpreb2P13373 142 aa7.29□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Lyrm9Q3UN90 78 aa7.29□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Bub3Q9WVA3 326 aa7.29□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Ighv1-16A0A075B5U1 98 aa7.29□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Wfdc10Q3V2J9 124 aa7.29□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Atp6v0e1Q9CQD8 81 aa7.29□□□□□ -1.24
Scn8a-213ENSMUST00000201549 TroQ6DIC6 2087 aa7.29□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Gm37389A0A0A6YW05 95 aa7.29□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Gm16381A0A1Y7VKT9 73 aa7.29□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Ebi3O35228 228 aa7.29□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Ighv1-80A0A075B5Y3 117 aa7.28□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Nop10Q9CQS2 64 aa7.28□□□□□ -1.24
Scn8a-213ENSMUST00000201549 HampQ9EQ21 83 aa7.28□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Gm28539A0A087WSL9 92 aa7.28□□□□□ -1.24
Scn8a-213ENSMUST00000201549 P0C1Z5 52 aa7.28□□□□□ -1.24
Scn8a-213ENSMUST00000201549 4930415O20RikQ8CDT5 131 aa7.28□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Ube2aQ9Z255 152 aa7.28□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Trav12-3A0A075B648 115 aa7.28□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Pygo1Q9D0P5 417 aa7.28□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Igkv2-137A0A0B4J1H6 120 aa7.28□□□□□ -1.24
Scn8a-213ENSMUST00000201549 P01649 108 aa7.28□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Sec61gP60060 68 aa7.28□□□□□ -1.24
Scn8a-213ENSMUST00000201549 NpbQ8K4P1 119 aa7.28□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Plekhb2Q9QZC7 221 aa7.28□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Lrp4Q8VI56 1905 aa7.28□□□□□ -1.24
Retrieved 100 of 22,080 RNA–protein pairs in 90.4 ms