RNA–Protein interactions for RNA: ENSMUST00000168878.7

Shroom3-204, Transcript of Protein Shroom3, mousemouse

TSL 1 (best) BASIC

Gene Shroom3, Length 5,630 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-204ENSMUST00000168878 Igkv4-78A0A0A6YYE5 119 aa13.21□□□□□ -0.29
Shroom3-204ENSMUST00000168878 Ccl21aP84444 133 aa13.21□□□□□ -0.29
Shroom3-204ENSMUST00000168878 Ccl21bP86792 133 aa13.21□□□□□ -0.29
Shroom3-204ENSMUST00000168878 Ccl21cP86793 133 aa13.21□□□□□ -0.29
Shroom3-204ENSMUST00000168878 Rbmy1bQ60990 380 aa13.21□□□□□ -0.29
Shroom3-204ENSMUST00000168878 Gm20708H3BKF4 155 aa13.21□□□□□ -0.29
Shroom3-204ENSMUST00000168878 Plscr4P58196 326 aa13.21□□□□□ -0.29
Shroom3-204ENSMUST00000168878 Spink10Q8CAC8 162 aa13.21□□□□□ -0.29
Shroom3-204ENSMUST00000168878 Nxph4G3X9N5 304 aa13.21□□□□□ -0.3
Shroom3-204ENSMUST00000168878 Foxi2Q3I5G5 311 aa13.21□□□□□ -0.3
Shroom3-204ENSMUST00000168878 Sptan1P16546 2472 aaKnown RBP13.21□□□□□ -0.3
Shroom3-204ENSMUST00000168878 P04943 107 aa13.21□□□□□ -0.3
Shroom3-204ENSMUST00000168878 Tnfrsf23Q9ER63 176 aa13.21□□□□□ -0.3
Shroom3-204ENSMUST00000168878 Nckap5E9QAE1 1909 aa13.2□□□□□ -0.3
Shroom3-204ENSMUST00000168878 Gm20481G3UXK4 153 aa13.2□□□□□ -0.3
Shroom3-204ENSMUST00000168878 Defb47Q30KN1 79 aa13.2□□□□□ -0.3
Shroom3-204ENSMUST00000168878 P01837 106 aa13.2□□□□□ -0.3
Shroom3-204ENSMUST00000168878 Dand5Q76LW6 185 aa13.2□□□□□ -0.3
Shroom3-204ENSMUST00000168878 Ang4Q3TMQ6 144 aa13.2□□□□□ -0.3
Shroom3-204ENSMUST00000168878 Gm15217A2CG07 155 aa13.19□□□□□ -0.3
Shroom3-204ENSMUST00000168878 Ccl24Q9JKC0 119 aa13.19□□□□□ -0.3
Shroom3-204ENSMUST00000168878 Crlf1Q9JM58 425 aa13.19□□□□□ -0.3
Shroom3-204ENSMUST00000168878 Cdpf1Q8R3A2 119 aa13.19□□□□□ -0.3
Shroom3-204ENSMUST00000168878 Gm17455G3UW87 128 aa13.19□□□□□ -0.3
Shroom3-204ENSMUST00000168878 GfyJ3KML8 504 aa13.19□□□□□ -0.3
Shroom3-204ENSMUST00000168878 1500011B03RikQ3TTH7 73 aa13.19□□□□□ -0.3
Shroom3-204ENSMUST00000168878 Iglc1A0A0G2JE99 106 aa13.19□□□□□ -0.3
Shroom3-204ENSMUST00000168878 P01843 105 aa13.19□□□□□ -0.3
Shroom3-204ENSMUST00000168878 NpyP57774 97 aa13.19□□□□□ -0.3
Shroom3-204ENSMUST00000168878 Bub3Q9WVA3 326 aa13.19□□□□□ -0.3
Shroom3-204ENSMUST00000168878 Rai1Q61818 1889 aa13.18□□□□□ -0.3
Shroom3-204ENSMUST00000168878 Igkv4-57A0A0A6YYE7 117 aa13.18□□□□□ -0.3
Shroom3-204ENSMUST00000168878 Pcdh15Q99PJ1 1943 aa13.18□□□□□ -0.3
Shroom3-204ENSMUST00000168878 TncQ80YX1 2110 aa13.18□□□□□ -0.3
Shroom3-204ENSMUST00000168878 9230109A22RikQ8BHE6 111 aa13.18□□□□□ -0.3
Shroom3-204ENSMUST00000168878 Med12A2AGH6 2190 aa13.17□□□□□ -0.3
Shroom3-204ENSMUST00000168878 Ighv1-12A0A0A6YXJ9 117 aa13.17□□□□□ -0.3
Shroom3-204ENSMUST00000168878 Lst1O08843 95 aa13.17□□□□□ -0.3
Shroom3-204ENSMUST00000168878 Glrp1E9Q9S8 174 aa13.17□□□□□ -0.3
Shroom3-204ENSMUST00000168878 P04944 107 aa13.17□□□□□ -0.3
Shroom3-204ENSMUST00000168878 Lyrm9Q3UN90 78 aa13.17□□□□□ -0.3
Shroom3-204ENSMUST00000168878 Nop10Q9CQS2 64 aa13.17□□□□□ -0.3
Shroom3-204ENSMUST00000168878 Mlst8Q9DCJ1 326 aa13.17□□□□□ -0.3
Shroom3-204ENSMUST00000168878 Timm17aQ9Z0V8 171 aa13.17□□□□□ -0.3
Shroom3-204ENSMUST00000168878 Trav4d-3A0A075B625 110 aa13.17□□□□□ -0.3
Shroom3-204ENSMUST00000168878 Zfp951A0A087WRH0 451 aa13.17□□□□□ -0.3
Shroom3-204ENSMUST00000168878 Gm21994F6T2D2 329 aa13.17□□□□□ -0.3
Shroom3-204ENSMUST00000168878 7420426K07RikQ3UX66 186 aa13.17□□□□□ -0.3
Shroom3-204ENSMUST00000168878 IgipA0A1B0GR74 53 aa13.16□□□□□ -0.3
Shroom3-204ENSMUST00000168878 Prp2P05143 317 aa13.16□□□□□ -0.3
Shroom3-204ENSMUST00000168878 Nbl1Q61477 178 aa13.16□□□□□ -0.3
Shroom3-204ENSMUST00000168878 Tmem243B2RVB9 118 aa13.16□□□□□ -0.3
Shroom3-204ENSMUST00000168878 CstadQ9D245 104 aa13.16□□□□□ -0.3
Shroom3-204ENSMUST00000168878 MsmpB1AWI6 139 aa13.16□□□□□ -0.3
Shroom3-204ENSMUST00000168878 Ramp1Q9WTJ5 148 aa13.16□□□□□ -0.3
Shroom3-204ENSMUST00000168878 P01753 117 aa13.16□□□□□ -0.3
Shroom3-204ENSMUST00000168878 Trav9-2A0A075B647 113 aa13.15□□□□□ -0.3
Shroom3-204ENSMUST00000168878 Trav9-4A0A0B4J1K2 113 aa13.15□□□□□ -0.3
Shroom3-204ENSMUST00000168878 Vsig4F6TUL9 280 aa13.15□□□□□ -0.3
Shroom3-204ENSMUST00000168878 MgamB5THE2 1827 aa13.15□□□□□ -0.3
Shroom3-204ENSMUST00000168878 C920008G01RikA0A0B4J1N1 112 aa13.15□□□□□ -0.3
Shroom3-204ENSMUST00000168878 Gm6034E9Q101 117 aa13.15□□□□□ -0.3
Shroom3-204ENSMUST00000168878 Gm10553J3QPF1 123 aa13.15□□□□□ -0.3
Shroom3-204ENSMUST00000168878 Fam110dQ80X91 271 aa13.15□□□□□ -0.3
Shroom3-204ENSMUST00000168878 E030018B13RikJ3QMS9 113 aa13.15□□□□□ -0.3
Shroom3-204ENSMUST00000168878 Tax1bp3Q9DBG9 124 aa13.14□□□□□ -0.31
Shroom3-204ENSMUST00000168878 Gm10295Q8CCF3 114 aa13.14□□□□□ -0.31
Shroom3-204ENSMUST00000168878 Iglv1A0A075B663 117 aa13.14□□□□□ -0.31
Shroom3-204ENSMUST00000168878 Crip1P63254 77 aa13.14□□□□□ -0.31
Shroom3-204ENSMUST00000168878 Odf1Q61999 247 aa13.14□□□□□ -0.31
Shroom3-204ENSMUST00000168878 Ndufb4Q9CQC7 129 aa13.14□□□□□ -0.31
Shroom3-204ENSMUST00000168878 UrahQ9CRB3 118 aa13.14□□□□□ -0.31
Shroom3-204ENSMUST00000168878 Trbv13-1A0A0B4J1P8 112 aa13.13□□□□□ -0.31
Shroom3-204ENSMUST00000168878 Trav9n-2A0A0G2JDP3 113 aa13.13□□□□□ -0.31
Shroom3-204ENSMUST00000168878 Egr2P08152 470 aa13.13□□□□□ -0.31
Shroom3-204ENSMUST00000168878 P01658 132 aa13.13□□□□□ -0.31
Shroom3-204ENSMUST00000168878 PemtQ61907 199 aa13.13□□□□□ -0.31
Shroom3-204ENSMUST00000168878 Znf672Q99LH4 468 aa13.13□□□□□ -0.31
Shroom3-204ENSMUST00000168878 Gm20726G3UX18 150 aa13.12□□□□□ -0.31
Shroom3-204ENSMUST00000168878 Oxld1Q9CR10 201 aa13.12□□□□□ -0.31
Shroom3-204ENSMUST00000168878 Gm26602M0QWA4 95 aa13.12□□□□□ -0.31
Shroom3-204ENSMUST00000168878 Gm9949Q8C9F4 104 aa13.12□□□□□ -0.31
Shroom3-204ENSMUST00000168878 PkdrejQ9Z0T6 2126 aa13.12□□□□□ -0.31
Shroom3-204ENSMUST00000168878 Trav9d-3A0A075B695 113 aa13.12□□□□□ -0.31
Shroom3-204ENSMUST00000168878 Trav4-3A0A0B4J1K1 110 aa13.11□□□□□ -0.31
Shroom3-204ENSMUST00000168878 P01674 108 aa13.11□□□□□ -0.31
Shroom3-204ENSMUST00000168878 Parp4E9PYK3 1969 aa13.11□□□□□ -0.31
Shroom3-204ENSMUST00000168878 P0C913 63 aa13.11□□□□□ -0.31
Shroom3-204ENSMUST00000168878 Ndufs7Q9DC70 224 aa13.11□□□□□ -0.31
Shroom3-204ENSMUST00000168878 Trip12G5E870 2025 aaKnown RBP13.11□□□□□ -0.31
Shroom3-204ENSMUST00000168878 Rpl39P62892 51 aa13.11□□□□□ -0.31
Shroom3-204ENSMUST00000168878 Gm21060J3KMU4 56 aa13.1□□□□□ -0.31
Shroom3-204ENSMUST00000168878 Gm5468Q8C3D3 155 aa13.1□□□□□ -0.31
Shroom3-204ENSMUST00000168878 Q99M08 65 aa13.1□□□□□ -0.31
Shroom3-204ENSMUST00000168878 A230072I06RikQ3UUJ8 172 aa13.1□□□□□ -0.31
Shroom3-204ENSMUST00000168878 Ighv3-1A0A075B5S6 116 aa13.1□□□□□ -0.31
Shroom3-204ENSMUST00000168878 Igkv4-58A0A0G2JGI6 119 aa13.1□□□□□ -0.31
Shroom3-204ENSMUST00000168878 OdaphJ3QNT8 126 aa13.1□□□□□ -0.31
Shroom3-204ENSMUST00000168878 Ndufa1O35683 70 aa13.1□□□□□ -0.31
Shroom3-204ENSMUST00000168878 Rbm3O89086 153 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 46.7 ms