RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Vmn1r197Q8R265 298 aa17.05■□□□□ 0.32
Upf3a-201ENSMUST00000043767 Psmb8P28063 276 aa17.05■□□□□ 0.32
Upf3a-201ENSMUST00000043767 Cox6b1P56391 86 aaKnown RBP17.05■□□□□ 0.32
Upf3a-201ENSMUST00000043767 Ighv1-9A0A0A6YW37 117 aa17.04■□□□□ 0.32
Upf3a-201ENSMUST00000043767 Gm3443F7CCV5 94 aa17.04■□□□□ 0.32
Upf3a-201ENSMUST00000043767 Cacng7P62956 275 aa17.04■□□□□ 0.32
Upf3a-201ENSMUST00000043767 Olfr365Q8VFT2 312 aa17.04■□□□□ 0.32
Upf3a-201ENSMUST00000043767 Ndufc2Q9CQ54 120 aa17.04■□□□□ 0.32
Upf3a-201ENSMUST00000043767 Ube2l6Q9QZU9 153 aa17.04■□□□□ 0.32
Upf3a-201ENSMUST00000043767 Fmc1Q9CR13 113 aa17.03■□□□□ 0.32
Upf3a-201ENSMUST00000043767 Gtsf1lQ9CWD0 151 aa17.03■□□□□ 0.32
Upf3a-201ENSMUST00000043767 Tmem160Q9D938 188 aa17.03■□□□□ 0.32
Upf3a-201ENSMUST00000043767 PdfS4R2K0 231 aa17.03■□□□□ 0.32
Upf3a-201ENSMUST00000043767 Ighv2-3A0A075B696 115 aa17.03■□□□□ 0.32
Upf3a-201ENSMUST00000043767 7420426K07RikQ3UX66 186 aa17.03■□□□□ 0.32
Upf3a-201ENSMUST00000043767 Olfr1437Q7TQR7 312 aa17.03■□□□□ 0.32
Upf3a-201ENSMUST00000043767 Defa30E9QPZ2 93 aa17.02■□□□□ 0.32
Upf3a-201ENSMUST00000043767 NpsP0C0P8 89 aa17.02■□□□□ 0.32
Upf3a-201ENSMUST00000043767 Cd69P37217 199 aa17.02■□□□□ 0.32
Upf3a-201ENSMUST00000043767 Crip3Q6Q6R3 243 aa17.02■□□□□ 0.32
Upf3a-201ENSMUST00000043767 H1fxQ80ZM5 188 aa17.02■□□□□ 0.32
Upf3a-201ENSMUST00000043767 Spink2Q8BMY7 86 aa17.02■□□□□ 0.32
Upf3a-201ENSMUST00000043767 Esm1Q9QYY7 184 aa17.01■□□□□ 0.31
Upf3a-201ENSMUST00000043767 Tmem238lA0A1B0GS74 79 aa17.01■□□□□ 0.31
Upf3a-201ENSMUST00000043767 Ca1P13634 261 aa17.01■□□□□ 0.31
Upf3a-201ENSMUST00000043767 Rnf152Q8BG47 203 aa17.01■□□□□ 0.31
Upf3a-201ENSMUST00000043767 Ighv9-1A0A0B4J1P3 117 aa17■□□□□ 0.31
Upf3a-201ENSMUST00000043767 Esp38A8R0X1 80 aa17■□□□□ 0.31
Upf3a-201ENSMUST00000043767 Ube2tQ9CQ37 204 aa17■□□□□ 0.31
Upf3a-201ENSMUST00000043767 PpdpfQ9CR37 115 aa17■□□□□ 0.31
Upf3a-201ENSMUST00000043767 Ighv1-50A0A075B5W1 117 aa17■□□□□ 0.31
Upf3a-201ENSMUST00000043767 Reg3gO09049 174 aa17■□□□□ 0.31
Upf3a-201ENSMUST00000043767 P01756 117 aa17■□□□□ 0.31
Upf3a-201ENSMUST00000043767 P01757 117 aa17■□□□□ 0.31
Upf3a-201ENSMUST00000043767 Tenm1Q9WTS4 2731 aa16.99■□□□□ 0.31
Upf3a-201ENSMUST00000043767 Defa6P50704 93 aa16.99■□□□□ 0.31
Upf3a-201ENSMUST00000043767 PdpnQ62011 172 aa16.99■□□□□ 0.31
Upf3a-201ENSMUST00000043767 MycbQ6P8Z1 170 aa16.99■□□□□ 0.31
Upf3a-201ENSMUST00000043767 Map1lc3aQ91VR7 121 aa16.99■□□□□ 0.31
Upf3a-201ENSMUST00000043767 Rnf185Q91YT2 192 aa16.99■□□□□ 0.31
Upf3a-201ENSMUST00000043767 Klk1b4P00757 256 aa16.98■□□□□ 0.31
Upf3a-201ENSMUST00000043767 Snrpd3P62320 126 aaKnown RBP16.98■□□□□ 0.31
Upf3a-201ENSMUST00000043767 Rnf114Q9ET26 229 aa16.98■□□□□ 0.31
Upf3a-201ENSMUST00000043767 A0A1Y7VMQ4 148 aa16.98■□□□□ 0.31
Upf3a-201ENSMUST00000043767 Omt2bD3YX29 119 aa16.98■□□□□ 0.31
Upf3a-201ENSMUST00000043767 A830031A19RikQ8BNT5 113 aa16.98■□□□□ 0.31
Upf3a-201ENSMUST00000043767 Olfr498Q8VEW2 330 aa16.98■□□□□ 0.31
Upf3a-201ENSMUST00000043767 PerpQ9JK95 193 aa16.98■□□□□ 0.31
Upf3a-201ENSMUST00000043767 PlnP61014 52 aa16.97■□□□□ 0.31
Upf3a-201ENSMUST00000043767 Odf3Q920N1 254 aa16.97■□□□□ 0.31
Upf3a-201ENSMUST00000043767 Wfdc2Q9DAU7 174 aa16.97■□□□□ 0.31
Upf3a-201ENSMUST00000043767 Stab1Q8R4Y4 2571 aa16.97■□□□□ 0.31
Upf3a-201ENSMUST00000043767 Sap30O88574 220 aa16.97■□□□□ 0.31
Upf3a-201ENSMUST00000043767 Gm10604Q3V0X7 143 aa16.97■□□□□ 0.31
Upf3a-201ENSMUST00000043767 Pxt1Q8K459 51 aa16.97■□□□□ 0.31
Upf3a-201ENSMUST00000043767 1810032O08RikE9PZV8 113 aa16.96■□□□□ 0.31
Upf3a-201ENSMUST00000043767 Vsig8Q6P3A4 417 aa16.96■□□□□ 0.31
Upf3a-201ENSMUST00000043767 Rbfox3Q8BIF2 374 aa16.96■□□□□ 0.31
Upf3a-201ENSMUST00000043767 Tppp3Q9CRB6 176 aaKnown RBP16.96■□□□□ 0.31
Upf3a-201ENSMUST00000043767 Trav14-2A0A075B694 121 aa16.95■□□□□ 0.3
Upf3a-201ENSMUST00000043767 Ndufa4l2Q4FZG9 87 aa16.95■□□□□ 0.3
Upf3a-201ENSMUST00000043767 Olfr317Q5NCD6 327 aa16.95■□□□□ 0.3
Upf3a-201ENSMUST00000043767 Nbeal2Q6ZQA0 2742 aa16.95■□□□□ 0.3
Upf3a-201ENSMUST00000043767 Ighv5-9-1A0A0A6YVS4 126 aa16.95■□□□□ 0.3
Upf3a-201ENSMUST00000043767 Smim13E9Q942 88 aa16.95■□□□□ 0.3
Upf3a-201ENSMUST00000043767 Emp2O88662 172 aa16.95■□□□□ 0.3
Upf3a-201ENSMUST00000043767 Npc2Q9Z0J0 149 aa16.95■□□□□ 0.3
Upf3a-201ENSMUST00000043767 Dmbt1Q60997 2085 aa16.94■□□□□ 0.3
Upf3a-201ENSMUST00000043767 BC107364E9Q5A2 140 aa16.94■□□□□ 0.3
Upf3a-201ENSMUST00000043767 Nhlrc1Q8BR37 401 aa16.94■□□□□ 0.3
Upf3a-201ENSMUST00000043767 Ighv1-23A0A0A6YVW3 117 aa16.93■□□□□ 0.3
Upf3a-201ENSMUST00000043767 Olfr311Q5NC59 308 aa16.93■□□□□ 0.3
Upf3a-201ENSMUST00000043767 Gphb5Q812B2 130 aa16.93■□□□□ 0.3
Upf3a-201ENSMUST00000043767 Q9D131 166 aa16.93■□□□□ 0.3
Upf3a-201ENSMUST00000043767 Trbv30A0A0B4J1P1 111 aa16.93■□□□□ 0.3
Upf3a-201ENSMUST00000043767 Gm26727M0QWT1 121 aa16.93■□□□□ 0.3
Upf3a-201ENSMUST00000043767 Gm94Q3V2D2 93 aa16.93■□□□□ 0.3
Upf3a-201ENSMUST00000043767 G0s2Q61585 103 aa16.93■□□□□ 0.3
Upf3a-201ENSMUST00000043767 Hspe1Q64433 102 aaKnown RBP16.93■□□□□ 0.3
Upf3a-201ENSMUST00000043767 LhbO09108 141 aa16.92■□□□□ 0.3
Upf3a-201ENSMUST00000043767 Ly6c2P0CW03 131 aa16.92■□□□□ 0.3
Upf3a-201ENSMUST00000043767 Il22ra1Q80XZ4 581 aa16.92■□□□□ 0.3
Upf3a-201ENSMUST00000043767 Dusp14Q9JLY7 198 aa16.92■□□□□ 0.3
Upf3a-201ENSMUST00000043767 Gm5157A0A087WRH8 301 aa16.92■□□□□ 0.3
Upf3a-201ENSMUST00000043767 1520401A03RikA0A0J9YVH6 598 aa16.92■□□□□ 0.3
Upf3a-201ENSMUST00000043767 Tmem136Q3TYE7 245 aa16.92■□□□□ 0.3
Upf3a-201ENSMUST00000043767 Smim15Q3UTD9 74 aa16.92■□□□□ 0.3
Upf3a-201ENSMUST00000043767 Smim10l1A0A087WNQ7 89 aa16.91■□□□□ 0.3
Upf3a-201ENSMUST00000043767 Olfr312Q7TRZ9 308 aa16.91■□□□□ 0.3
Upf3a-201ENSMUST00000043767 Obox1Q9D350 204 aa16.91■□□□□ 0.3
Upf3a-201ENSMUST00000043767 Fam216aQ9DB54 251 aa16.91■□□□□ 0.3
Upf3a-201ENSMUST00000043767 Ighv8-8A0A0A6YXQ0 119 aa16.9■□□□□ 0.3
Upf3a-201ENSMUST00000043767 Vsig4F6TUL9 280 aa16.9■□□□□ 0.3
Upf3a-201ENSMUST00000043767 Gm933J3QPC1 141 aa16.9■□□□□ 0.3
Upf3a-201ENSMUST00000043767 Gng4P50153 75 aa16.9■□□□□ 0.3
Upf3a-201ENSMUST00000043767 Fam110dQ80X91 271 aa16.9■□□□□ 0.3
Upf3a-201ENSMUST00000043767 OtorQ9JIE3 128 aa16.9■□□□□ 0.3
Upf3a-201ENSMUST00000043767 Slc25a20Q9Z2Z6 301 aaKnown RBP16.9■□□□□ 0.3
Upf3a-201ENSMUST00000043767 Snx22Q8C084 192 aa16.9■□□□□ 0.3
Upf3a-201ENSMUST00000043767 Khdc1aQ3UWR2 166 aa16.89■□□□□ 0.29
Retrieved 100 of 22,080 RNA–protein pairs in 122.7 ms