RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Gm17359A0A0G2JEB7 487 aa7.91□□□□□ -1.14
Ubr1-201ENSMUST00000028728 Zc2hc1aQ8BJH1 324 aa7.91□□□□□ -1.14
Ubr1-201ENSMUST00000028728 P01739 132 aa7.91□□□□□ -1.14
Ubr1-201ENSMUST00000028728 Gm9961Q8BNV2 113 aa7.91□□□□□ -1.14
Ubr1-201ENSMUST00000028728 Igf2rQ07113 2483 aaKnown RBP7.91□□□□□ -1.14
Ubr1-201ENSMUST00000028728 Gm15217A2CG07 155 aa7.91□□□□□ -1.14
Ubr1-201ENSMUST00000028728 Gm20726G3UX18 150 aa7.91□□□□□ -1.14
Ubr1-201ENSMUST00000028728 P01738 130 aa7.91□□□□□ -1.14
Ubr1-201ENSMUST00000028728 Vmo1Q5SXG7 201 aa7.9□□□□□ -1.14
Ubr1-201ENSMUST00000028728 MplkipQ9D011 178 aa7.9□□□□□ -1.14
Ubr1-201ENSMUST00000028728 Trip12G5E870 2025 aaKnown RBP7.9□□□□□ -1.14
Ubr1-201ENSMUST00000028728 Nckap5E9QAE1 1909 aa7.9□□□□□ -1.14
Ubr1-201ENSMUST00000028728 Trav14d-3-dv8A0A075B619 120 aa7.9□□□□□ -1.14
Ubr1-201ENSMUST00000028728 Trbv16A0A0B4J1H3 115 aa7.9□□□□□ -1.14
Ubr1-201ENSMUST00000028728 BC107364E9Q5A2 140 aa7.9□□□□□ -1.14
Ubr1-201ENSMUST00000028728 P01802 115 aa7.9□□□□□ -1.14
Ubr1-201ENSMUST00000028728 Prok1Q14A28 105 aa7.9□□□□□ -1.14
Ubr1-201ENSMUST00000028728 P01786 117 aa7.9□□□□□ -1.14
Ubr1-201ENSMUST00000028728 Gata4Q08369 441 aa7.9□□□□□ -1.14
Ubr1-201ENSMUST00000028728 Ahctf1Q8CJF7 2243 aaKnown RBP7.9□□□□□ -1.14
Ubr1-201ENSMUST00000028728 Igkv8-24A0A140T8P5 121 aa7.9□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Bub3Q9WVA3 326 aa7.9□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Fam208bQ5DTT3 2382 aa7.89□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Igkv4-68A0A0B4J1I7 117 aa7.89□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Gm815Q3UWS2 115 aa7.89□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Ndufa4l2Q4FZG9 87 aa7.89□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Trav7-6A0A075B640 112 aa7.89□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Trav9d-4A0A0G2JG37 103 aa7.89□□□□□ -1.15
Ubr1-201ENSMUST00000028728 E030018B13RikJ3QMS9 113 aa7.89□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Crip1P63254 77 aa7.89□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Spink12Q9D256 87 aa7.89□□□□□ -1.15
Ubr1-201ENSMUST00000028728 SvipQ3UZP4 77 aa7.89□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Snai3Q9QY31 287 aa7.89□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Synj2bpQ9D6K5 145 aa7.89□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Arfgef3Q3UGY8 2170 aa7.88□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Arhgap21Q6DFV3 1944 aa7.88□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Heatr5aQ5PRF0 2038 aa7.88□□□□□ -1.15
Ubr1-201ENSMUST00000028728 CadB2RQC6 2225 aa7.88□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Egr2P08152 470 aa7.88□□□□□ -1.15
Ubr1-201ENSMUST00000028728 1700010B08RikQ9DAI7 102 aa7.88□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Tmem254aP0DN89 123 aa7.88□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Tmem254bP0DN90 123 aa7.88□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Tmem254cP0DN91 123 aa7.88□□□□□ -1.15
Ubr1-201ENSMUST00000028728 P01750 117 aa7.88□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Defb29Q8BGW9 78 aa7.88□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Gm12253Q5NC48 229 aa7.87□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Ube2e2Q91W82 201 aa7.87□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Tmem210Q9D2F0 147 aa7.87□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Ncoa6Q9JL19 2067 aa7.87□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Ighv1-4A0A075B5T4 117 aa7.87□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Gm20708H3BKF4 155 aa7.87□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Ccl19O70460 108 aa7.87□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Dazap2Q9DCP9 168 aa7.87□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Reg3dQ9QUS9 175 aa7.87□□□□□ -1.15
Ubr1-201ENSMUST00000028728 P06330 118 aa7.87□□□□□ -1.15
Ubr1-201ENSMUST00000028728 E130218I03RikA0A0U1RNU5 63 aa7.87□□□□□ -1.15
Ubr1-201ENSMUST00000028728 AngP21570 145 aa7.87□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Col24a1Q30D77 1733 aa7.87□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Fgf6P21658 208 aa7.87□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Anapc1P53995 1944 aaKnown RBP7.87□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Gm2564F6Z9S8 108 aa7.86□□□□□ -1.15
Ubr1-201ENSMUST00000028728 P01748 117 aa7.86□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Gm9747Q810H1 104 aa7.86□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Mrpl52Q9D0Y8 121 aa7.86□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Tmem263Q9DAM7 115 aa7.86□□□□□ -1.15
Ubr1-201ENSMUST00000028728 P01659 112 aa7.86□□□□□ -1.15
Ubr1-201ENSMUST00000028728 BC048562Q80ZQ7 204 aa7.86□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Ighv12-3A0A075B5T1 117 aa7.86□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Hoxd3P09027 433 aa7.86□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Gm42674D3YUT9 64 aa7.86□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Prr14lE9Q7C4 1971 aa7.86□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Igkv4-61A0A0G2JH00 117 aa7.85□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Gm17455G3UW87 128 aa7.85□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Spink8Q09TK9 105 aa7.85□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Brk1Q91VR8 75 aa7.85□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Prpf8Q99PV0 2335 aaKnown RBP7.85□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Gm20730A0A075B5J6 119 aa7.85□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Igkv3-1A0A075B5P1 119 aa7.85□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Gm14137Q8CE97 175 aa7.85□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Ccl24Q9JKC0 119 aa7.85□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Ighv1-52A0A0A6YXC3 117 aa7.85□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Ighv8-12A0A0G2JDE1 119 aa7.85□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Igkv3-9A0A140T8P4 119 aa7.85□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Igkv4-59A0A0B4J1I8 117 aa7.85□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Lypd6Q8BPP5 171 aa7.85□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Igkv8-16A0A0G2JDG9 121 aa7.85□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Ighv3-4A0A0A6YXF1 117 aa7.85□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Cox6b1P56391 86 aaKnown RBP7.85□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Mrpl35Q9CQL6 188 aa7.85□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Hoxb4P10284 250 aa7.85□□□□□ -1.15
Ubr1-201ENSMUST00000028728 A230072I06RikQ3UUJ8 172 aa7.85□□□□□ -1.15
Ubr1-201ENSMUST00000028728 ArtnQ9Z0L2 224 aa7.85□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Ighv3-1A0A075B5S6 116 aa7.84□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Fam19a4Q7TPG5 135 aa7.84□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Ndufb4Q9CQC7 129 aa7.84□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Ndufc1Q9CQY9 76 aa7.84□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Dennd4cA6H8H2 1906 aa7.84□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Odf3Q920N1 254 aa7.84□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Ighv8-5A0A0A6YY60 119 aa7.84□□□□□ -1.15
Ubr1-201ENSMUST00000028728 Gm5878E9PUB3 99 aa7.84□□□□□ -1.15
Retrieved 100 of 22,080 RNA–protein pairs in 10.1 ms