RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Gpr82Q8BZR0 328 aa8.43□□□□□ -1.06
Msh3-201ENSMUST00000022220 CicQ924A2 2510 aa8.43□□□□□ -1.06
Msh3-201ENSMUST00000022220 Trav19A0A0B4J1K4 119 aa8.43□□□□□ -1.06
Msh3-201ENSMUST00000022220 Iglc1A0A0G2JE99 106 aa8.43□□□□□ -1.06
Msh3-201ENSMUST00000022220 Gm9925F6T2U3 160 aa8.43□□□□□ -1.06
Msh3-201ENSMUST00000022220 P01843 105 aa8.43□□□□□ -1.06
Msh3-201ENSMUST00000022220 Ighv5-6A0A075B5Q0 117 aa8.43□□□□□ -1.06
Msh3-201ENSMUST00000022220 P0C1Z5 52 aa8.43□□□□□ -1.06
Msh3-201ENSMUST00000022220 Runx1Q03347 451 aa8.43□□□□□ -1.06
Msh3-201ENSMUST00000022220 Gm9958Q8C9U4 106 aa8.43□□□□□ -1.06
Msh3-201ENSMUST00000022220 Odf3Q920N1 254 aa8.43□□□□□ -1.06
Msh3-201ENSMUST00000022220 Usp9yF8VPU6 2556 aa8.42□□□□□ -1.06
Msh3-201ENSMUST00000022220 Brd3osA0A1B0GRB6 84 aa8.42□□□□□ -1.06
Msh3-201ENSMUST00000022220 Fgf6P21658 208 aa8.42□□□□□ -1.06
Msh3-201ENSMUST00000022220 UrahQ9CRB3 118 aa8.42□□□□□ -1.06
Msh3-201ENSMUST00000022220 Obox1Q9D350 204 aa8.42□□□□□ -1.06
Msh3-201ENSMUST00000022220 DmdP11531 3678 aa8.42□□□□□ -1.06
Msh3-201ENSMUST00000022220 Gm9513B3GLJ6 99 aa8.42□□□□□ -1.06
Msh3-201ENSMUST00000022220 MrapQ9D159 127 aa8.42□□□□□ -1.06
Msh3-201ENSMUST00000022220 Ang5Q5GAN1 145 aa8.42□□□□□ -1.06
Msh3-201ENSMUST00000022220 Spag11Q8K4N2 71 aa8.42□□□□□ -1.06
Msh3-201ENSMUST00000022220 Plac1Q9JI83 173 aa8.42□□□□□ -1.06
Msh3-201ENSMUST00000022220 P06334 169 aa8.41□□□□□ -1.06
Msh3-201ENSMUST00000022220 MdfiP70331 251 aa8.41□□□□□ -1.06
Msh3-201ENSMUST00000022220 Zfp248Q640N4 576 aa8.41□□□□□ -1.06
Msh3-201ENSMUST00000022220 Ube2e2Q91W82 201 aa8.41□□□□□ -1.06
Msh3-201ENSMUST00000022220 Zfp119aQ9JIC0 545 aa8.41□□□□□ -1.06
Msh3-201ENSMUST00000022220 Gm29644A0A087WPG2 191 aa8.41□□□□□ -1.06
Msh3-201ENSMUST00000022220 Cox8cA6H666 72 aa8.41□□□□□ -1.06
Msh3-201ENSMUST00000022220 Defa1P11477 93 aa8.41□□□□□ -1.06
Msh3-201ENSMUST00000022220 Ighv1-74A0A0G2JGK2 117 aa8.41□□□□□ -1.06
Msh3-201ENSMUST00000022220 Gm15557A6PWY0 234 aa8.41□□□□□ -1.06
Msh3-201ENSMUST00000022220 Hoxb4P10284 250 aa8.41□□□□□ -1.06
Msh3-201ENSMUST00000022220 Ighv14-1A0A075B5R4 117 aa8.4□□□□□ -1.06
Msh3-201ENSMUST00000022220 Mllt11P97783 90 aa8.4□□□□□ -1.06
Msh3-201ENSMUST00000022220 Gm1968Q3T9I3 115 aa8.4□□□□□ -1.06
Msh3-201ENSMUST00000022220 Ifitm10Q8BR26 201 aa8.4□□□□□ -1.06
Msh3-201ENSMUST00000022220 Col27a1Q5QNQ9 1845 aa8.4□□□□□ -1.06
Msh3-201ENSMUST00000022220 Ighv2-6A0A075B6A7 116 aa8.4□□□□□ -1.06
Msh3-201ENSMUST00000022220 E030018B13RikJ3QMS9 113 aa8.4□□□□□ -1.06
Msh3-201ENSMUST00000022220 Defa2P28309 93 aa8.4□□□□□ -1.06
Msh3-201ENSMUST00000022220 Tcl1b4P56844 120 aa8.4□□□□□ -1.06
Msh3-201ENSMUST00000022220 Srsf1Q6PDM2 248 aaKnown RBP8.4□□□□□ -1.06
Msh3-201ENSMUST00000022220 Cd27P41272 250 aa8.4□□□□□ -1.07
Msh3-201ENSMUST00000022220 P06330 118 aa8.39□□□□□ -1.07
Msh3-201ENSMUST00000022220 Edn2P22389 175 aa8.39□□□□□ -1.07
Msh3-201ENSMUST00000022220 Ly86O88188 162 aa8.39□□□□□ -1.07
Msh3-201ENSMUST00000022220 P01812 117 aa8.39□□□□□ -1.07
Msh3-201ENSMUST00000022220 Odf3l1Q810P2 275 aa8.39□□□□□ -1.07
Msh3-201ENSMUST00000022220 Q9D131 166 aa8.39□□□□□ -1.07
Msh3-201ENSMUST00000022220 Dpm3Q9D1Q4 92 aa8.39□□□□□ -1.07
Msh3-201ENSMUST00000022220 NbeaQ9EPN1 2936 aa8.39□□□□□ -1.07
Msh3-201ENSMUST00000022220 Crip3Q6Q6R3 243 aa8.38□□□□□ -1.07
Msh3-201ENSMUST00000022220 Igkv4-91A0A075B5L2 119 aa8.38□□□□□ -1.07
Msh3-201ENSMUST00000022220 BC106179Q8C9L1 186 aa8.38□□□□□ -1.07
Msh3-201ENSMUST00000022220 Trdv5A0A075B661 115 aa8.38□□□□□ -1.07
Msh3-201ENSMUST00000022220 Nat8b-psE0CYC6 232 aa8.38□□□□□ -1.07
Msh3-201ENSMUST00000022220 Gata4Q08369 441 aa8.38□□□□□ -1.07
Msh3-201ENSMUST00000022220 Samd10Q7TST3 202 aa8.38□□□□□ -1.07
Msh3-201ENSMUST00000022220 H1fxQ80ZM5 188 aa8.38□□□□□ -1.07
Msh3-201ENSMUST00000022220 Cxcl14Q9WUQ5 99 aa8.38□□□□□ -1.07
Msh3-201ENSMUST00000022220 PtprqP0C5E4 2300 aa8.38□□□□□ -1.07
Msh3-201ENSMUST00000022220 Ighv1-4A0A075B5T4 117 aa8.37□□□□□ -1.07
Msh3-201ENSMUST00000022220 Samd5Q3V1H9 173 aa8.37□□□□□ -1.07
Msh3-201ENSMUST00000022220 Cysrt1Q9D1E4 142 aa8.37□□□□□ -1.07
Msh3-201ENSMUST00000022220 Muc2Q80Z19 2680 aa8.37□□□□□ -1.07
Msh3-201ENSMUST00000022220 Shisal2aA2A9G7 189 aa8.37□□□□□ -1.07
Msh3-201ENSMUST00000022220 Vsig4F6TUL9 280 aa8.37□□□□□ -1.07
Msh3-201ENSMUST00000022220 Gm5294J3QP53 216 aa8.37□□□□□ -1.07
Msh3-201ENSMUST00000022220 Rpl35aO55142 110 aa8.37□□□□□ -1.07
Msh3-201ENSMUST00000022220 PkigO70139 76 aa8.37□□□□□ -1.07
Msh3-201ENSMUST00000022220 Atp5lQ9CPQ8 103 aa8.37□□□□□ -1.07
Msh3-201ENSMUST00000022220 Ighv1-9A0A0A6YW37 117 aa8.37□□□□□ -1.07
Msh3-201ENSMUST00000022220 P01756 117 aa8.37□□□□□ -1.07
Msh3-201ENSMUST00000022220 P01757 117 aa8.37□□□□□ -1.07
Msh3-201ENSMUST00000022220 Spink10Q8CAC8 162 aa8.37□□□□□ -1.07
Msh3-201ENSMUST00000022220 Tac4Q99N14 128 aa8.37□□□□□ -1.07
Msh3-201ENSMUST00000022220 Gm5089A1L3C8 106 aa8.36□□□□□ -1.07
Msh3-201ENSMUST00000022220 Lypd1Q8BLC3 141 aa8.36□□□□□ -1.07
Msh3-201ENSMUST00000022220 Pradc1Q9D9N8 188 aa8.36□□□□□ -1.07
Msh3-201ENSMUST00000022220 Wfdc15bQ9JHY4 80 aa8.36□□□□□ -1.07
Msh3-201ENSMUST00000022220 Adgrg4B7ZCC9 3073 aa8.36□□□□□ -1.07
Msh3-201ENSMUST00000022220 Gm35549A0A0N4SUS7 141 aa8.36□□□□□ -1.07
Msh3-201ENSMUST00000022220 Ovol2Q8CIV7 274 aa8.36□□□□□ -1.07
Msh3-201ENSMUST00000022220 Lgals6O54891 301 aa8.36□□□□□ -1.07
Msh3-201ENSMUST00000022220 CckP09240 115 aa8.36□□□□□ -1.07
Msh3-201ENSMUST00000022220 Gm14137Q8CE97 175 aa8.36□□□□□ -1.07
Msh3-201ENSMUST00000022220 Mustn1Q99JI1 82 aa8.36□□□□□ -1.07
Msh3-201ENSMUST00000022220 Pde6hP61249 83 aa8.35□□□□□ -1.07
Msh3-201ENSMUST00000022220 D130052B06RikQ3UW13 202 aa8.35□□□□□ -1.07
Msh3-201ENSMUST00000022220 7420426K07RikQ3UX66 186 aa8.35□□□□□ -1.07
Msh3-201ENSMUST00000022220 Gm12689Q8BQU9 117 aa8.35□□□□□ -1.07
Msh3-201ENSMUST00000022220 Ccl24Q9JKC0 119 aa8.35□□□□□ -1.07
Msh3-201ENSMUST00000022220 FlnaQ8BTM8 2647 aaKnown RBP8.35□□□□□ -1.07
Msh3-201ENSMUST00000022220 Gm7075D3Z497 112 aa8.35□□□□□ -1.07
Msh3-201ENSMUST00000022220 Umad1E0CX23 159 aa8.35□□□□□ -1.07
Msh3-201ENSMUST00000022220 Gm2564F6Z9S8 108 aa8.35□□□□□ -1.07
Msh3-201ENSMUST00000022220 Ccl19O70460 108 aa8.35□□□□□ -1.07
Msh3-201ENSMUST00000022220 Znf575Q3TXZ1 239 aa8.35□□□□□ -1.07
Msh3-201ENSMUST00000022220 Mzt1Q8BUR9 78 aa8.35□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 36.1 ms