RNA–Protein interactions for RNA: ENSMUST00000002412.8

Ncan-201, Transcript of Neurocan core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ncan, Length 7,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ncan-201ENSMUST00000002412 Gm42674D3YUT9 64 aa9.88□□□□□ -0.83
Ncan-201ENSMUST00000002412 Med12A2AGH6 2190 aa9.88□□□□□ -0.83
Ncan-201ENSMUST00000002412 Trav6-6A0A075B603 114 aa9.88□□□□□ -0.83
Ncan-201ENSMUST00000002412 Trbv14A0A140T8L9 115 aa9.88□□□□□ -0.83
Ncan-201ENSMUST00000002412 Fam241bQ9D882 120 aa9.88□□□□□ -0.83
Ncan-201ENSMUST00000002412 Dock1Q8BUR4 1865 aa9.88□□□□□ -0.83
Ncan-201ENSMUST00000002412 Tmem30bQ8BHG3 353 aa9.88□□□□□ -0.83
Ncan-201ENSMUST00000002412 Wipf1Q8K1I7 493 aa9.88□□□□□ -0.83
Ncan-201ENSMUST00000002412 Ifitm1Q9D103 106 aa9.87□□□□□ -0.83
Ncan-201ENSMUST00000002412 Pmaip1Q9JM54 103 aa9.87□□□□□ -0.83
Ncan-201ENSMUST00000002412 AtrxQ61687 2476 aaKnown RBP9.87□□□□□ -0.83
Ncan-201ENSMUST00000002412 FancmQ8BGE5 2021 aa9.87□□□□□ -0.83
Ncan-201ENSMUST00000002412 Gm4861Q8C5A4 106 aa9.87□□□□□ -0.83
Ncan-201ENSMUST00000002412 LenepQ9WVB6 61 aa9.87□□□□□ -0.83
Ncan-201ENSMUST00000002412 Baz2aQ91YE5 1889 aaKnown RBP9.87□□□□□ -0.83
Ncan-201ENSMUST00000002412 Ormdl1Q921I0 153 aa9.87□□□□□ -0.83
Ncan-201ENSMUST00000002412 Tfpi2O35536 230 aa9.87□□□□□ -0.83
Ncan-201ENSMUST00000002412 Tmem254aP0DN89 123 aa9.87□□□□□ -0.83
Ncan-201ENSMUST00000002412 Tmem254bP0DN90 123 aa9.87□□□□□ -0.83
Ncan-201ENSMUST00000002412 Tmem254cP0DN91 123 aa9.87□□□□□ -0.83
Ncan-201ENSMUST00000002412 Gphb5Q812B2 130 aa9.87□□□□□ -0.83
Ncan-201ENSMUST00000002412 Them7Q9DCP4 223 aa9.87□□□□□ -0.83
Ncan-201ENSMUST00000002412 Atp5eP56382 52 aa9.86□□□□□ -0.83
Ncan-201ENSMUST00000002412 CenpwQ3URR0 86 aa9.86□□□□□ -0.83
Ncan-201ENSMUST00000002412 Zgrf1Q0VGT4 1863 aa9.86□□□□□ -0.83
Ncan-201ENSMUST00000002412 Timm17bQ9Z0V7 172 aa9.86□□□□□ -0.83
Ncan-201ENSMUST00000002412 Gm10542F6XDR3 90 aa9.86□□□□□ -0.83
Ncan-201ENSMUST00000002412 Camk2n2Q78WH7 79 aa9.86□□□□□ -0.83
Ncan-201ENSMUST00000002412 Gm9936Q8C864 160 aa9.86□□□□□ -0.83
Ncan-201ENSMUST00000002412 Atp6v0e2Q91XE7 81 aa9.86□□□□□ -0.83
Ncan-201ENSMUST00000002412 Col6a6Q8C6K9 2265 aa9.86□□□□□ -0.83
Ncan-201ENSMUST00000002412 Asxl3Q8C4A5 2259 aa9.86□□□□□ -0.83
Ncan-201ENSMUST00000002412 Heatr5aQ5PRF0 2038 aa9.86□□□□□ -0.83
Ncan-201ENSMUST00000002412 Mbd6Q3TY92 1003 aa9.86□□□□□ -0.83
Ncan-201ENSMUST00000002412 Sptbn1Q62261 2363 aaKnown RBP9.85□□□□□ -0.83
Ncan-201ENSMUST00000002412 Ighv5-9-1A0A0A6YVS4 126 aa9.85□□□□□ -0.83
Ncan-201ENSMUST00000002412 Gm20499D3Z4G5 72 aa9.85□□□□□ -0.83
Ncan-201ENSMUST00000002412 Sh2d1aO88890 126 aa9.85□□□□□ -0.83
Ncan-201ENSMUST00000002412 Hoxb4P10284 250 aa9.85□□□□□ -0.83
Ncan-201ENSMUST00000002412 Znf672Q99LH4 468 aa9.85□□□□□ -0.83
Ncan-201ENSMUST00000002412 Gtsf1Q9DAN6 167 aa9.85□□□□□ -0.83
Ncan-201ENSMUST00000002412 Minos1Q7TNS2 76 aa9.85□□□□□ -0.83
Ncan-201ENSMUST00000002412 Tln2Q71LX4 2375 aa9.85□□□□□ -0.83
Ncan-201ENSMUST00000002412 Trav9-2A0A075B647 113 aa9.85□□□□□ -0.83
Ncan-201ENSMUST00000002412 Trav9-4A0A0B4J1K2 113 aa9.85□□□□□ -0.83
Ncan-201ENSMUST00000002412 Trav12d-3A0A075B6A4 115 aa9.85□□□□□ -0.83
Ncan-201ENSMUST00000002412 Igkv8-21A0A140T8P7 120 aa9.85□□□□□ -0.83
Ncan-201ENSMUST00000002412 Defb38Q7TNV7 63 aa9.85□□□□□ -0.83
Ncan-201ENSMUST00000002412 Sptbn2Q68FG2 2388 aa9.84□□□□□ -0.83
Ncan-201ENSMUST00000002412 Gm5129F6YHA9 99 aa9.84□□□□□ -0.83
Ncan-201ENSMUST00000002412 Cox7bP56393 80 aa9.84□□□□□ -0.83
Ncan-201ENSMUST00000002412 Defb40Q70KL2 73 aa9.84□□□□□ -0.83
Ncan-201ENSMUST00000002412 Sbf2E9PXF8 1872 aa9.84□□□□□ -0.83
Ncan-201ENSMUST00000002412 Fhl4Q8CDC8 279 aa9.84□□□□□ -0.83
Ncan-201ENSMUST00000002412 Cox7b2Q9D2H1 82 aa9.84□□□□□ -0.83
Ncan-201ENSMUST00000002412 Q9DAQ5 155 aa9.84□□□□□ -0.83
Ncan-201ENSMUST00000002412 Spta1P08032 2415 aa9.84□□□□□ -0.83
Ncan-201ENSMUST00000002412 A0A1L1SR50 188 aa9.84□□□□□ -0.83
Ncan-201ENSMUST00000002412 Gm20604F8WIA3 75 aa9.84□□□□□ -0.83
Ncan-201ENSMUST00000002412 Rhno1Q8K3A4 235 aa9.84□□□□□ -0.83
Ncan-201ENSMUST00000002412 Sox16Q62247 57 aa9.84□□□□□ -0.83
Ncan-201ENSMUST00000002412 Dock4P59764 1978 aa9.84□□□□□ -0.83
Ncan-201ENSMUST00000002412 Col4a3Q9QZS0 1669 aa9.84□□□□□ -0.84
Ncan-201ENSMUST00000002412 Msrb2Q78J03 175 aa9.83□□□□□ -0.84
Ncan-201ENSMUST00000002412 Dscaml1Q4VA61 2053 aa9.83□□□□□ -0.84
Ncan-201ENSMUST00000002412 Ltbp1Q8CG19 1712 aa9.83□□□□□ -0.84
Ncan-201ENSMUST00000002412 Igkv3-7A0A0G2JE31 119 aa9.83□□□□□ -0.84
Ncan-201ENSMUST00000002412 Igkv6-32A0A140T8N9 115 aa9.83□□□□□ -0.84
Ncan-201ENSMUST00000002412 Gm10553J3QPF1 123 aa9.83□□□□□ -0.84
Ncan-201ENSMUST00000002412 Mrps21P58059 87 aa9.83□□□□□ -0.84
Ncan-201ENSMUST00000002412 Gm19684G3UZ45 117 aa9.83□□□□□ -0.84
Ncan-201ENSMUST00000002412 Col18a1P39061 1774 aa9.82□□□□□ -0.84
Ncan-201ENSMUST00000002412 Casp8ap2Q9WUF3 1962 aa9.82□□□□□ -0.84
Ncan-201ENSMUST00000002412 Ighv1-64A0A075B5X3 117 aa9.82□□□□□ -0.84
Ncan-201ENSMUST00000002412 P06320 134 aa9.82□□□□□ -0.84
Ncan-201ENSMUST00000002412 AmelxP63277 210 aa9.82□□□□□ -0.84
Ncan-201ENSMUST00000002412 Klk5Q9D140 293 aa9.82□□□□□ -0.84
Ncan-201ENSMUST00000002412 Ighv10-3A0A075B5T6 119 aa9.82□□□□□ -0.84
Ncan-201ENSMUST00000002412 Ighv1-50A0A075B5W1 117 aa9.82□□□□□ -0.84
Ncan-201ENSMUST00000002412 Gm10762Q9CZN6 115 aa9.82□□□□□ -0.84
Ncan-201ENSMUST00000002412 Tmem210Q9D2F0 147 aa9.82□□□□□ -0.84
Ncan-201ENSMUST00000002412 Wdr38Q9D994 303 aa9.82□□□□□ -0.84
Ncan-201ENSMUST00000002412 Atox1O08997 68 aaKnown RBP9.81□□□□□ -0.84
Ncan-201ENSMUST00000002412 SisF8VQM5 1818 aa9.81□□□□□ -0.84
Ncan-201ENSMUST00000002412 Ighv1-76A0A0G2JFE9 117 aa9.81□□□□□ -0.84
Ncan-201ENSMUST00000002412 BC107364E9Q5A2 140 aa9.81□□□□□ -0.84
Ncan-201ENSMUST00000002412 Gm10735Q3US96 136 aa9.81□□□□□ -0.84
Ncan-201ENSMUST00000002412 Tsc2Q61037 1814 aa9.8□□□□□ -0.84
Ncan-201ENSMUST00000002412 Ighv8-5A0A0A6YY60 119 aa9.8□□□□□ -0.84
Ncan-201ENSMUST00000002412 Ighv1-82A0A0G2JEU7 117 aa9.8□□□□□ -0.84
Ncan-201ENSMUST00000002412 Wfdc3Q14AE4 130 aa9.8□□□□□ -0.84
Ncan-201ENSMUST00000002412 Gm1968Q3T9I3 115 aa9.8□□□□□ -0.84
Ncan-201ENSMUST00000002412 Myo7bQ99MZ6 2113 aa9.8□□□□□ -0.84
Ncan-201ENSMUST00000002412 Reg3bP35230 175 aa9.8□□□□□ -0.84
Ncan-201ENSMUST00000002412 Fam110aQ8R184 296 aa9.8□□□□□ -0.84
Ncan-201ENSMUST00000002412 Fam19a4Q7TPG5 135 aa9.8□□□□□ -0.84
Ncan-201ENSMUST00000002412 Fancd2osQ9D4K4 178 aa9.8□□□□□ -0.84
Ncan-201ENSMUST00000002412 Ighv1-74A0A0G2JGK2 117 aa9.8□□□□□ -0.84
Ncan-201ENSMUST00000002412 P01638 115 aa9.8□□□□□ -0.84
Ncan-201ENSMUST00000002412 Gm12253Q5NC48 229 aa9.8□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 11.1 ms