RNA–Protein interactions for RNA: snR47

snR47, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR47, Length 99 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR47	snR47	YPK1	P12688	680 aa	Known RBP	0.2	□□□□□ -2.38
snR47	snR47	RRP43	P25359	394 aa	Predicted RBP	0.2	□□□□□ -2.38
snR47	snR47	IMG2	P25642	146 aa	Predicted RBP	0.2	□□□□□ -2.38
snR47	snR47	PRE4	P30657	266 aa		0.2	□□□□□ -2.38
snR47	snR47	MNN4	P36044	1178 aa		0.2	□□□□□ -2.38
snR47	snR47	NUG1	P40010	520 aa	Known RBP	0.2	□□□□□ -2.38
snR47	snR47	PXA1	P41909	870 aa		0.2	□□□□□ -2.38
snR47	snR47	SNP1	Q00916	300 aa	Predicted RBP	0.2	□□□□□ -2.38
snR47	snR47	TAF8	Q03750	510 aa		0.2	□□□□□ -2.38
snR47	snR47	YOR389W	Q08912	624 aa		0.2	□□□□□ -2.38
snR47	snR47	OSH2	Q12451	1283 aa		0.2	□□□□□ -2.38
snR47	snR47	YCR061W	P25639	631 aa		0.19	□□□□□ -2.38
snR47	snR47	CDC5	P32562	705 aa		0.19	□□□□□ -2.38
snR47	snR47	NOP15	P53927	220 aa	Predicted RBP	0.19	□□□□□ -2.38
snR47	snR47	PPN1	Q04119	674 aa		0.19	□□□□□ -2.38
snR47	snR47	HEL2	Q05580	639 aa	Known RBP	0.19	□□□□□ -2.38
snR47	snR47	TDA5	Q06417	326 aa	Known RBP	0.19	□□□□□ -2.38
snR47	snR47	POS5	Q06892	414 aa		0.19	□□□□□ -2.38
snR47	snR47	YDL124W	Q07551	312 aa	Known RBP	0.19	□□□□□ -2.38
snR47	snR47	DCS2	Q12123	353 aa		0.19	□□□□□ -2.38
snR47	snR47	CIT2	P08679	460 aa		0.18	□□□□□ -2.38
snR47	snR47	MGR1	P25573	417 aa		0.18	□□□□□ -2.38
snR47	snR47	ARE1	P25628	610 aa		0.18	□□□□□ -2.38
snR47	snR47	BET3	P36149	193 aa		0.18	□□□□□ -2.38
snR47	snR47	TIF5	P38431	405 aa	Known RBP	0.18	□□□□□ -2.38
snR47	snR47	YIR014W	P40570	242 aa		0.18	□□□□□ -2.38
snR47	snR47	CAF16	P43569	289 aa		0.18	□□□□□ -2.38
snR47	snR47	NHX1	Q04121	633 aa		0.18	□□□□□ -2.38
snR47	snR47	PIG1	Q06216	648 aa		0.18	□□□□□ -2.38
snR47	snR47	LCB4	Q12246	624 aa		0.18	□□□□□ -2.38
snR47	snR47	GDH1	P07262	454 aa	Known RBP	0.17	□□□□□ -2.38
snR47	snR47	YKU70	P32807	602 aa		0.17	□□□□□ -2.38
snR47	snR47	STO1	P34160	861 aa	Known RBP	0.17	□□□□□ -2.38
snR47	snR47	LEU5	P38702	357 aa		0.17	□□□□□ -2.38
snR47	snR47	COG2	P53271	262 aa		0.17	□□□□□ -2.38
snR47	snR47	YNL181W	P53878	407 aa		0.17	□□□□□ -2.38
snR47	snR47	GPD1	Q00055	391 aa	Known RBP	0.17	□□□□□ -2.38
snR47	snR47	SMA1	Q02651	245 aa		0.17	□□□□□ -2.38
snR47	snR47	PSR2	Q07949	397 aa		0.17	□□□□□ -2.38
snR47	snR47	SES1	P07284	462 aa	Known RBP	0.16	□□□□□ -2.38
snR47	snR47	MRS3	P10566	314 aa		0.16	□□□□□ -2.38
snR47	snR47	POL3	P15436	1097 aa		0.16	□□□□□ -2.38
snR47	snR47	ISY1	P21374	235 aa	Predicted RBP	0.16	□□□□□ -2.38
snR47	snR47	PLC1	P32383	869 aa		0.16	□□□□□ -2.38
snR47	snR47	SFP1	P32432	683 aa		0.16	□□□□□ -2.38
snR47	snR47	TRS65	P32893	560 aa		0.16	□□□□□ -2.38
snR47	snR47	YBP1	P38315	674 aa		0.16	□□□□□ -2.38
snR47	snR47	LAS21	P40367	830 aa		0.16	□□□□□ -2.38
snR47	snR47	CDC1	P40986	491 aa		0.16	□□□□□ -2.38
snR47	snR47	ASK10	P48361	1146 aa		0.16	□□□□□ -2.38
snR47	snR47	YGL036W	P53185	909 aa	Predicted RBP	0.16	□□□□□ -2.38
snR47	snR47	BTN2	P53286	410 aa		0.16	□□□□□ -2.38
snR47	snR47	PLM2	Q04383	521 aa		0.16	□□□□□ -2.38
snR47	snR47	BSC1	Q12140	328 aa		0.16	□□□□□ -2.38
snR47	snR47	PGI1	P12709	554 aa	Known RBP	0.15	□□□□□ -2.39
snR47	snR47	AMD2	P22580	549 aa		0.15	□□□□□ -2.39
snR47	snR47	AGA1	P32323	725 aa		0.15	□□□□□ -2.39
snR47	snR47	ASF1	P32447	279 aa		0.15	□□□□□ -2.39
snR47	snR47	YKL097C	P34245	136 aa		0.15	□□□□□ -2.39
snR47	snR47	EHT1	P38295	451 aa		0.15	□□□□□ -2.39
snR47	snR47	RRP8	P38961	392 aa	Known RBP	0.15	□□□□□ -2.39
snR47	snR47	VPS8	P39702	1274 aa		0.15	□□□□□ -2.39
snR47	snR47	SAP1	P39955	897 aa	Known RBP	0.15	□□□□□ -2.39
snR47	snR47	PRM2	P40534	656 aa		0.15	□□□□□ -2.39
snR47	snR47	MAD1	P40957	749 aa		0.15	□□□□□ -2.39
snR47	snR47	YDL183C	P48569	320 aa		0.15	□□□□□ -2.39
snR47	snR47	YAT1	P80235	687 aa		0.15	□□□□□ -2.39
snR47	snR47	YMR178W	Q03219	274 aa	Known RBP	0.15	□□□□□ -2.39
snR47	snR47	RSF1	Q05043	376 aa		0.15	□□□□□ -2.39
snR47	snR47	HCR1	Q05775	265 aa	Known RBP	0.15	□□□□□ -2.39
snR47	snR47	PDR8	Q06149	701 aa		0.15	□□□□□ -2.39
snR47	snR47	RFM1	Q12192	310 aa		0.15	□□□□□ -2.39
snR47	snR47	YPS3	Q12303	508 aa		0.15	□□□□□ -2.39
snR47	snR47	CIT1	P00890	479 aa		0.14	□□□□□ -2.39
snR47	snR47	HSP60	P19882	572 aa	Known RBP	0.14	□□□□□ -2.39
snR47	snR47	VPS33	P20795	691 aa		0.14	□□□□□ -2.39
snR47	snR47	SGF29	P25554	259 aa		0.14	□□□□□ -2.39
snR47	snR47	HOG1	P32485	435 aa		0.14	□□□□□ -2.39
snR47	snR47	MTC7	P32633	139 aa		0.14	□□□□□ -2.39
snR47	snR47	AGP2	P38090	596 aa		0.14	□□□□□ -2.39
snR47	snR47	YJL193W	P39542	402 aa		0.14	□□□□□ -2.39
snR47	snR47	YJL213W	P40896	331 aa		0.14	□□□□□ -2.39
snR47	snR47	UBP8	P50102	471 aa		0.14	□□□□□ -2.39
snR47	snR47	COS10	P52924	374 aa		0.14	□□□□□ -2.39
snR47	snR47	NSE5	Q03718	556 aa		0.14	□□□□□ -2.39
snR47	snR47	YLR407W	Q06070	228 aa		0.14	□□□□□ -2.39
snR47	snR47	YRM1	Q12340	786 aa		0.14	□□□□□ -2.39
snR47	snR47	CBP1	P07252	654 aa		0.13	□□□□□ -2.39
snR47	snR47	GLN3	P18494	730 aa		0.13	□□□□□ -2.39
snR47	snR47	HEM3	P28789	327 aa		0.13	□□□□□ -2.39
snR47	snR47	MSS51	P32335	436 aa		0.13	□□□□□ -2.39
snR47	snR47	MRP21	P38175	177 aa		0.13	□□□□□ -2.39
snR47	snR47	RCK2	P38623	610 aa		0.13	□□□□□ -2.39
snR47	snR47	STB5	P38699	743 aa		0.13	□□□□□ -2.39
snR47	snR47	DIM1	P41819	318 aa	Known RBP	0.13	□□□□□ -2.39
snR47	snR47	TAF4	P50105	388 aa		0.13	□□□□□ -2.39
snR47	snR47	RTA1	P53047	317 aa		0.13	□□□□□ -2.39
snR47	snR47	MET13	P53128	600 aa		0.13	□□□□□ -2.39
snR47	snR47	HST1	P53685	503 aa		0.13	□□□□□ -2.39
snR47	snR47	YML119W	Q03208	357 aa		0.13	□□□□□ -2.39

Retrieved 100 of 5,963 RNA–protein pairs in 32.8 ms