RNA–Protein interactions for RNA: YPR049C

ATG11, Transcript of Adapter protein for pexophagy and the Cvt targeting pathway, yeastyeast

Gene ATG11, Length 3,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG11YPR049C CBP3P21560 335 aa2.35□□□□□ -2.03
ATG11YPR049C EMC1P25574 760 aa2.35□□□□□ -2.03
ATG11YPR049C TYE7P33122 291 aaPredicted RBP2.35□□□□□ -2.03
ATG11YPR049C TCD2P36101 447 aaKnown RBP2.35□□□□□ -2.03
ATG11YPR049C OPY1P38271 328 aa2.35□□□□□ -2.03
ATG11YPR049C HSV2P50079 448 aaPredicted RBP2.35□□□□□ -2.03
ATG11YPR049C RAI1P53063 387 aaKnown RBP2.35□□□□□ -2.03
ATG11YPR049C TIM44Q01852 431 aa2.35□□□□□ -2.03
ATG11YPR049C SIZ1Q04195 904 aa2.35□□□□□ -2.03
ATG11YPR049C VID22Q05934 901 aa2.35□□□□□ -2.03
ATG11YPR049C SAM4Q08985 325 aaKnown RBP2.35□□□□□ -2.03
ATG11YPR049C SUL2Q12325 893 aa2.35□□□□□ -2.03
ATG11YPR049C SRD1P09007 221 aa2.34□□□□□ -2.03
ATG11YPR049C MPH2P0CD99 609 aa2.34□□□□□ -2.03
ATG11YPR049C MMS4P38257 691 aa2.34□□□□□ -2.03
ATG11YPR049C EXO1P39875 702 aa2.34□□□□□ -2.03
ATG11YPR049C ERG10P41338 398 aaKnown RBP2.34□□□□□ -2.03
ATG11YPR049C SET2P46995 733 aaKnown RBP2.34□□□□□ -2.03
ATG11YPR049C AIM23P47015 356 aa2.34□□□□□ -2.03
ATG11YPR049C NMA2P53204 395 aa2.34□□□□□ -2.03
ATG11YPR049C IMP4P53941 290 aaKnown RBP2.34□□□□□ -2.03
ATG11YPR049C ARK1P53974 638 aa2.34□□□□□ -2.03
ATG11YPR049C TRS130Q03660 1102 aa2.34□□□□□ -2.03
ATG11YPR049C CLU1Q03690 1277 aaKnown RBP2.34□□□□□ -2.03
ATG11YPR049C AIM32Q04689 311 aa2.34□□□□□ -2.03
ATG11YPR049C BRR2P32639 2163 aaKnown RBP2.34□□□□□ -2.03
ATG11YPR049C RNQ1P25367 405 aa2.34□□□□□ -2.03
ATG11YPR049C LNP1P38878 278 aa2.34□□□□□ -2.03
ATG11YPR049C FPR3P38911 411 aaKnown RBP2.34□□□□□ -2.03
ATG11YPR049C SIP5P40210 489 aaKnown RBP2.34□□□□□ -2.03
ATG11YPR049C IRR1P40541 1150 aa2.34□□□□□ -2.03
ATG11YPR049C ALG11P53954 548 aaKnown RBP2.34□□□□□ -2.03
ATG11YPR049C CTR9P89105 1077 aa2.34□□□□□ -2.03
ATG11YPR049C YPL113CQ02961 396 aa2.34□□□□□ -2.03
ATG11YPR049C PRP2P20095 876 aaPredicted RBP2.34□□□□□ -2.04
ATG11YPR049C SET5P38890 526 aaKnown RBP2.34□□□□□ -2.04
ATG11YPR049C YJL049WP47048 450 aa2.34□□□□□ -2.04
ATG11YPR049C YGR012WP53206 393 aa2.34□□□□□ -2.04
ATG11YPR049C ENT2Q05785 613 aa2.34□□□□□ -2.04
ATG11YPR049C YLR407WQ06070 228 aa2.34□□□□□ -2.04
ATG11YPR049C HIS4P00815 799 aaKnown RBP2.33□□□□□ -2.04
ATG11YPR049C RPS13P05756 151 aaKnown RBP2.33□□□□□ -2.04
ATG11YPR049C CYM1P32898 989 aa2.33□□□□□ -2.04
ATG11YPR049C SKG6P32900 734 aaPredicted RBP2.33□□□□□ -2.04
ATG11YPR049C REC104P33323 182 aa2.33□□□□□ -2.04
ATG11YPR049C PPE1P38796 400 aa2.33□□□□□ -2.04
ATG11YPR049C DUN1P39009 513 aa2.33□□□□□ -2.04
ATG11YPR049C FKH2P41813 862 aa2.33□□□□□ -2.04
ATG11YPR049C RIM8P53179 542 aa2.33□□□□□ -2.04
ATG11YPR049C APC5Q08683 685 aa2.33□□□□□ -2.04
ATG11YPR049C SGT2Q12118 346 aaKnown RBP2.33□□□□□ -2.04
ATG11YPR049C ADE4P04046 510 aaKnown RBP2.33□□□□□ -2.04
ATG11YPR049C ADH7P25377 361 aa2.33□□□□□ -2.04
ATG11YPR049C CIN8P27895 1000 aa2.33□□□□□ -2.04
ATG11YPR049C TRM2P33753 639 aa2.33□□□□□ -2.04
ATG11YPR049C LAM1P38851 1228 aa2.33□□□□□ -2.04
ATG11YPR049C GIP4P39732 760 aa2.33□□□□□ -2.04
ATG11YPR049C YJR061WP40355 935 aa2.33□□□□□ -2.04
ATG11YPR049C YIL161WP40449 235 aaKnown RBP2.33□□□□□ -2.04
ATG11YPR049C NOG2P53742 486 aaKnown RBP2.33□□□□□ -2.04
ATG11YPR049C TOF2Q02208 771 aa2.33□□□□□ -2.04
ATG11YPR049C NRG1Q03125 231 aa2.33□□□□□ -2.04
ATG11YPR049C ECM38Q05902 660 aaPredicted RBP2.33□□□□□ -2.04
ATG11YPR049C RIM20Q12033 661 aa2.33□□□□□ -2.04
ATG11YPR049C NDJ1Q12366 352 aa2.33□□□□□ -2.04
ATG11YPR049C DAL82P21705 255 aa2.33□□□□□ -2.04
ATG11YPR049C ERG6P25087 383 aaKnown RBP2.33□□□□□ -2.04
ATG11YPR049C AGP1P25376 633 aa2.33□□□□□ -2.04
ATG11YPR049C BMH2P34730 273 aaKnown RBP2.33□□□□□ -2.04
ATG11YPR049C NUP60P39705 539 aa2.33□□□□□ -2.04
ATG11YPR049C NPP2P39997 493 aa2.33□□□□□ -2.04
ATG11YPR049C TAN1P53072 289 aaPredicted RBP2.33□□□□□ -2.04
ATG11YPR049C DAM1P53267 343 aa2.33□□□□□ -2.04
ATG11YPR049C SDA1P53313 767 aaKnown RBP2.33□□□□□ -2.04
ATG11YPR049C SEC5P89102 971 aa2.33□□□□□ -2.04
ATG11YPR049C TPO1Q07824 586 aa2.33□□□□□ -2.04
ATG11YPR049C YOR097CQ12274 175 aaPredicted RBP2.33□□□□□ -2.04
ATG11YPR049C FRE7Q12333 620 aa2.33□□□□□ -2.04
ATG11YPR049C BEM2P39960 2167 aaKnown RBP2.32□□□□□ -2.04
ATG11YPR049C LDB16P25587 256 aa2.32□□□□□ -2.04
ATG11YPR049C YBR225WP38321 900 aa2.32□□□□□ -2.04
ATG11YPR049C DSE1P40077 573 aa2.32□□□□□ -2.04
ATG11YPR049C PCI8P40512 444 aa2.32□□□□□ -2.04
ATG11YPR049C YFL054CP43549 646 aa2.32□□□□□ -2.04
ATG11YPR049C FET5P43561 622 aa2.32□□□□□ -2.04
ATG11YPR049C SWS2P53937 143 aa2.32□□□□□ -2.04
ATG11YPR049C TRM82Q03774 444 aa2.32□□□□□ -2.04
ATG11YPR049C SNU56Q03782 492 aaKnown RBP2.32□□□□□ -2.04
ATG11YPR049C CEX1Q12453 761 aa2.32□□□□□ -2.04
ATG11YPR049C RPL11AP0C0W9 174 aaKnown RBP2.32□□□□□ -2.04
ATG11YPR049C MAS1P10507 462 aa2.32□□□□□ -2.04
ATG11YPR049C ENT3P47160 408 aa2.32□□□□□ -2.04
ATG11YPR049C RSC1P53236 928 aa2.32□□□□□ -2.04
ATG11YPR049C RPL11BQ3E757 174 aaPredicted RBP2.32□□□□□ -2.04
ATG11YPR049C SES1P07284 462 aaKnown RBP2.31□□□□□ -2.04
ATG11YPR049C PEP3P27801 918 aa2.31□□□□□ -2.04
ATG11YPR049C SKN7P38889 622 aa2.31□□□□□ -2.04
ATG11YPR049C ASN1P49089 572 aaKnown RBP2.31□□□□□ -2.04
ATG11YPR049C SUN4P53616 420 aa2.31□□□□□ -2.04
ATG11YPR049C IPI3P53877 555 aa2.31□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 113.4 ms