RNA–Protein interactions for RNA: YPL139C

UME1, Transcript of Component of both the Rpd3S and Rpd3L histone deacetylase complexes, yeastyeast

Gene UME1, Length 1,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UME1YPL139C FLC2P39719 783 aa7.42□□□□□ -1.22
UME1YPL139C SAW1P39735 261 aa7.42□□□□□ -1.22
UME1YPL139C YEL028WP39989 153 aa7.42□□□□□ -1.22
UME1YPL139C RPS10BP46784 105 aaKnown RBP7.42□□□□□ -1.22
UME1YPL139C AIM23P47015 356 aa7.42□□□□□ -1.22
UME1YPL139C YGR127WP53275 312 aa7.42□□□□□ -1.22
UME1YPL139C GND2P53319 492 aa7.42□□□□□ -1.22
UME1YPL139C COP1P53622 1201 aaKnown RBP7.42□□□□□ -1.22
UME1YPL139C ATG16Q03818 150 aa7.42□□□□□ -1.22
UME1YPL139C UTP5Q04177 643 aaKnown RBP7.42□□□□□ -1.22
UME1YPL139C ERV41Q04651 352 aa7.42□□□□□ -1.22
UME1YPL139C JIP5Q06214 492 aaPredicted RBP7.42□□□□□ -1.22
UME1YPL139C SWC7Q06707 132 aa7.42□□□□□ -1.22
UME1YPL139C OPY2Q06810 360 aa7.42□□□□□ -1.22
UME1YPL139C RPS10AQ08745 105 aaPredicted RBP7.42□□□□□ -1.22
UME1YPL139C CIR2Q08822 631 aa7.42□□□□□ -1.22
UME1YPL139C GPM3Q12326 303 aa7.42□□□□□ -1.22
UME1YPL139C TY1A-DR4O74302 440 aa7.41□□□□□ -1.22
UME1YPL139C RAD3P06839 778 aa7.41□□□□□ -1.22
UME1YPL139C TY1A-HP0C2I4 478 aaKnown RBP7.41□□□□□ -1.22
UME1YPL139C TY1A-AP0CX57 440 aa7.41□□□□□ -1.22
UME1YPL139C TY1A-PR1P0CX58 440 aa7.41□□□□□ -1.22
UME1YPL139C TY1A-ORP0CX59 440 aa7.41□□□□□ -1.22
UME1YPL139C TY1A-PR2P0CX60 440 aa7.41□□□□□ -1.22
UME1YPL139C TY1A-DR5P0CX65 440 aa7.41□□□□□ -1.22
UME1YPL139C TY1A-ER2P0CX66 440 aa7.41□□□□□ -1.22
UME1YPL139C TY1A-GR3P0CX67 440 aa7.41□□□□□ -1.22
UME1YPL139C TY1A-LR1P0CX68 440 aa7.41□□□□□ -1.22
UME1YPL139C TY1A-MR2P0CX69 440 aa7.41□□□□□ -1.22
UME1YPL139C SEC23P15303 768 aaKnown RBP7.41□□□□□ -1.22
UME1YPL139C SPC110P32380 944 aa7.41□□□□□ -1.22
UME1YPL139C YBL055CP34220 418 aaPredicted RBP7.41□□□□□ -1.22
UME1YPL139C APM3P38153 483 aa7.41□□□□□ -1.22
UME1YPL139C PPE1P38796 400 aa7.41□□□□□ -1.22
UME1YPL139C AIM18P38884 321 aa7.41□□□□□ -1.22
UME1YPL139C PIK1P39104 1066 aa7.41□□□□□ -1.22
UME1YPL139C STL1P39932 569 aa7.41□□□□□ -1.22
UME1YPL139C PAN6P40459 309 aa7.41□□□□□ -1.22
UME1YPL139C TY1A-JR2P47099 440 aa7.41□□□□□ -1.22
UME1YPL139C BTN2P53286 410 aa7.41□□□□□ -1.22
UME1YPL139C RTS3P53289 263 aa7.41□□□□□ -1.22
UME1YPL139C TIM13P53299 105 aa7.41□□□□□ -1.22
UME1YPL139C TY1A-DR1Q03856 440 aa7.41□□□□□ -1.22
UME1YPL139C TY1A-ML1Q04706 440 aaKnown RBP7.41□□□□□ -1.22
UME1YPL139C TY1A-BRQ12217 440 aa7.41□□□□□ -1.22
UME1YPL139C TY1A-NL2Q12470 440 aa7.41□□□□□ -1.22
UME1YPL139C TY1A-GR2Q12485 440 aa7.41□□□□□ -1.22
UME1YPL139C AFI1Q99222 893 aa7.41□□□□□ -1.22
UME1YPL139C COX5AP00424 153 aa7.4□□□□□ -1.22
UME1YPL139C SEC2P17065 759 aa7.4□□□□□ -1.22
UME1YPL139C SPT5P27692 1063 aaKnown RBP7.4□□□□□ -1.22
UME1YPL139C BIT2P38346 545 aa7.4□□□□□ -1.22
UME1YPL139C RCK2P38623 610 aa7.4□□□□□ -1.22
UME1YPL139C PPX1P38698 397 aa7.4□□□□□ -1.22
UME1YPL139C PMC1P38929 1173 aaPredicted RBP7.4□□□□□ -1.22
UME1YPL139C LCP5P40079 357 aaPredicted RBP7.4□□□□□ -1.22
UME1YPL139C KAP114P53067 1004 aa7.4□□□□□ -1.22
UME1YPL139C YNL108CP53929 270 aa7.4□□□□□ -1.22
UME1YPL139C MSH6Q03834 1242 aa7.4□□□□□ -1.22
UME1YPL139C CBC2Q08920 208 aaKnown RBP RIP-Chip data7.4□□□□□ -1.22not detected
UME1YPL139C PEX11Q12462 236 aa7.4□□□□□ -1.22
UME1YPL139C LEU1P07264 779 aaKnown RBP7.39□□□□□ -1.23
UME1YPL139C MPH2P0CD99 609 aa7.39□□□□□ -1.23
UME1YPL139C GFA1P14742 717 aaKnown RBP7.39□□□□□ -1.23
UME1YPL139C MRPL8P22353 238 aa7.39□□□□□ -1.23
UME1YPL139C GCD11P32481 527 aaKnown RBP7.39□□□□□ -1.23
UME1YPL139C STO1P34160 861 aaKnown RBP7.39□□□□□ -1.23
UME1YPL139C SRX1P36077 127 aa7.39□□□□□ -1.23
UME1YPL139C IRS4P36115 615 aaKnown RBP7.39□□□□□ -1.23
UME1YPL139C UTH1P36135 365 aa7.39□□□□□ -1.23
UME1YPL139C MRPL40P36534 297 aa7.39□□□□□ -1.23
UME1YPL139C VAC8P39968 578 aa7.39□□□□□ -1.23
UME1YPL139C MVP1P40959 511 aaKnown RBP7.39□□□□□ -1.23
UME1YPL139C AIM14P53109 570 aa7.39□□□□□ -1.23
UME1YPL139C PRM1P53835 661 aa7.39□□□□□ -1.23
UME1YPL139C VAC7P53950 1165 aa7.39□□□□□ -1.23
UME1YPL139C DOS2P54858 310 aa7.39□□□□□ -1.23
UME1YPL139C GRX8Q05926 109 aa7.39□□□□□ -1.23
UME1YPL139C IRA1P18963 3092 aa7.38□□□□□ -1.23
UME1YPL139C YLR462WO13556 202 aa7.38□□□□□ -1.23
UME1YPL139C AAT2P23542 418 aaKnown RBP7.38□□□□□ -1.23
UME1YPL139C PCA1P38360 1216 aa7.38□□□□□ -1.23
UME1YPL139C SRP68P38687 599 aaKnown RBP7.38□□□□□ -1.23
UME1YPL139C YHL049CP38722 271 aa7.38□□□□□ -1.23
UME1YPL139C PFS1P38872 237 aa7.38□□□□□ -1.23
UME1YPL139C BAT1P38891 393 aaKnown RBP7.38□□□□□ -1.23
UME1YPL139C PCF11P39081 626 aaPredicted RBP7.38□□□□□ -1.23
UME1YPL139C YFL064CP43540 174 aa7.38□□□□□ -1.23
UME1YPL139C DLD2P46681 530 aaKnown RBP7.38□□□□□ -1.23
UME1YPL139C RFX1P48743 811 aa7.38□□□□□ -1.23
UME1YPL139C MTO1P53070 669 aa7.38□□□□□ -1.23
UME1YPL139C YGL140CP53120 1219 aa7.38□□□□□ -1.23
UME1YPL139C JJJ1P53863 590 aa7.38□□□□□ -1.23
UME1YPL139C REG1Q00816 1014 aa7.38□□□□□ -1.23
UME1YPL139C NGL3Q03210 505 aa7.38□□□□□ -1.23
UME1YPL139C THI7Q05998 598 aa7.38□□□□□ -1.23
UME1YPL139C YDR018CQ12185 396 aa7.38□□□□□ -1.23
UME1YPL139C EFG1Q3E705 233 aaKnown RBP7.38□□□□□ -1.23
UME1YPL139C YBL111CQ3E7Y5 667 aa7.38□□□□□ -1.23
UME1YPL139C MIS1P09440 975 aaKnown RBP7.37□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms