RNA–Protein interactions for RNA: YMR179W

SPT21, Transcript of Protein with a role in transcriptional silencing, yeastyeast

Gene SPT21, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT21YMR179W ATX2Q12067 313 aa1.95□□□□□ -2.1
SPT21YMR179W YPR027CQ12079 277 aa1.95□□□□□ -2.1
SPT21YMR179W RTK1Q12100 620 aaPredicted RBP1.95□□□□□ -2.1
SPT21YMR179W URA3P03962 267 aa1.94□□□□□ -2.1
SPT21YMR179W RPT3P33298 428 aaKnown RBP1.94□□□□□ -2.1
SPT21YMR179W TOM71P38825 639 aaKnown RBP1.94□□□□□ -2.1
SPT21YMR179W RRP8P38961 392 aaKnown RBP1.94□□□□□ -2.1
SPT21YMR179W ERV46P39727 415 aa1.94□□□□□ -2.1
SPT21YMR179W YAT2P40017 923 aa1.94□□□□□ -2.1
SPT21YMR179W PEA2P40091 420 aa1.94□□□□□ -2.1
SPT21YMR179W MAD2P40958 196 aa1.94□□□□□ -2.1
SPT21YMR179W DUG1P43616 481 aaKnown RBP1.94□□□□□ -2.1
SPT21YMR179W MDR1P53258 950 aa1.94□□□□□ -2.1
SPT21YMR179W GIS2P53849 153 aaKnown RBP RIP-Chip data1.94□□□□□ -2.1not detected
SPT21YMR179W VTC3Q02725 835 aa1.94□□□□□ -2.1
SPT21YMR179W PLM2Q04383 521 aa1.94□□□□□ -2.1
SPT21YMR179W DIN7Q12086 430 aa1.94□□□□□ -2.1
SPT21YMR179W PUF2Q12221 1075 aaKnown RBP RIP-Chip data1.94□□□□□ -2.1 RIP-Chip
SPT21YMR179W SAP1P39955 897 aaKnown RBP1.94□□□□□ -2.1
SPT21YMR179W EAF5P39995 279 aa1.94□□□□□ -2.1
SPT21YMR179W YDL242WQ07746 117 aa1.94□□□□□ -2.1
SPT21YMR179W SES1P07284 462 aaKnown RBP1.93□□□□□ -2.1
SPT21YMR179W KGD2P19262 463 aaPredicted RBP1.93□□□□□ -2.1
SPT21YMR179W YCR043CP25361 127 aa1.93□□□□□ -2.1
SPT21YMR179W STB5P38699 743 aa1.93□□□□□ -2.1
SPT21YMR179W MTG2P38860 518 aa1.93□□□□□ -2.1
SPT21YMR179W NIT2P47016 307 aa1.93□□□□□ -2.1
SPT21YMR179W YNR071CP53757 342 aa1.93□□□□□ -2.1
SPT21YMR179W BOP3P53958 396 aa1.93□□□□□ -2.1
SPT21YMR179W PFA4Q12006 378 aa1.93□□□□□ -2.1
SPT21YMR179W CWC2Q12046 339 aaPredicted RBP1.93□□□□□ -2.1
SPT21YMR179W UBX3Q12229 455 aa1.93□□□□□ -2.1
SPT21YMR179W RMP1Q12530 201 aa1.93□□□□□ -2.1
SPT21YMR179W ILS1P09436 1072 aaKnown RBP1.93□□□□□ -2.1
SPT21YMR179W ARO9P38840 513 aaPredicted RBP1.93□□□□□ -2.1
SPT21YMR179W YIR016WP40572 265 aa1.93□□□□□ -2.1
SPT21YMR179W YOR111WQ99210 232 aa1.93□□□□□ -2.1
SPT21YMR179W YCR061WP25639 631 aa1.92□□□□□ -2.1
SPT21YMR179W PET309P32522 965 aaPredicted RBP1.92□□□□□ -2.1
SPT21YMR179W UBP7P40453 1071 aa1.92□□□□□ -2.1
SPT21YMR179W TES1P41903 349 aaKnown RBP1.92□□□□□ -2.1
SPT21YMR179W GSM1P42950 618 aa1.92□□□□□ -2.1
SPT21YMR179W ACS1Q01574 713 aa1.92□□□□□ -2.1
SPT21YMR179W MLH2Q07980 695 aa1.92□□□□□ -2.1
SPT21YMR179W DSE3Q08729 430 aa1.92□□□□□ -2.1
SPT21YMR179W SEC18P18759 758 aaKnown RBP1.92□□□□□ -2.1
SPT21YMR179W CNA1P23287 553 aa1.92□□□□□ -2.1
SPT21YMR179W GSH1P32477 678 aa1.92□□□□□ -2.1
SPT21YMR179W ARC40P38328 384 aaKnown RBP1.92□□□□□ -2.1
SPT21YMR179W YJL107CP42947 387 aa1.92□□□□□ -2.1
SPT21YMR179W YAT1P80235 687 aa1.92□□□□□ -2.1
SPT21YMR179W YML053CQ04978 212 aa1.92□□□□□ -2.1
SPT21YMR179W YTH1Q06102 208 aaPredicted RBP1.92□□□□□ -2.1
SPT21YMR179W HOS1Q12214 470 aa1.92□□□□□ -2.1
SPT21YMR179W YGR161W-CQ3E744 92 aa1.92□□□□□ -2.1
SPT21YMR179W YFL068WP0CX99 160 aa1.91□□□□□ -2.1
SPT21YMR179W YLL066W-AP0CY00 160 aa1.91□□□□□ -2.1
SPT21YMR179W YLL067W-AP0CY01 160 aa1.91□□□□□ -2.1
SPT21YMR179W COX11P19516 300 aaKnown RBP1.91□□□□□ -2.1
SPT21YMR179W STL1P39932 569 aa1.91□□□□□ -2.1
SPT21YMR179W YOR389WQ08912 624 aa1.91□□□□□ -2.1
SPT21YMR179W PRE2P30656 287 aaKnown RBP1.91□□□□□ -2.1
SPT21YMR179W SSP120P39931 234 aaKnown RBP1.91□□□□□ -2.1
SPT21YMR179W IDS2P46958 469 aa1.91□□□□□ -2.1
SPT21YMR179W YMR034CQ05131 434 aaPredicted RBP1.91□□□□□ -2.1
SPT21YMR179W ECM38Q05902 660 aaPredicted RBP1.91□□□□□ -2.1
SPT21YMR179W RRI1Q12468 440 aa1.91□□□□□ -2.1
SPT21YMR179W HEM12P32347 362 aaPredicted RBP1.9□□□□□ -2.11
SPT21YMR179W VBA2P38358 474 aaKnown RBP1.9□□□□□ -2.11
SPT21YMR179W YPT11P48559 417 aa1.9□□□□□ -2.11
SPT21YMR179W SPC105P53148 917 aa1.9□□□□□ -2.11
SPT21YMR179W GRS2Q06817 618 aa1.9□□□□□ -2.11
SPT21YMR179W YPL191CQ08930 360 aa1.9□□□□□ -2.11
SPT21YMR179W YER175W-AQ8TGU4 54 aa1.9□□□□□ -2.11
SPT21YMR179W PHO2P07269 559 aa1.89□□□□□ -2.11
SPT21YMR179W ARN1P38731 627 aa1.89□□□□□ -2.11
SPT21YMR179W FPR3P38911 411 aaKnown RBP1.89□□□□□ -2.11
SPT21YMR179W MET30P39014 640 aa1.89□□□□□ -2.11
SPT21YMR179W ORC5P50874 479 aa1.89□□□□□ -2.11
SPT21YMR179W TRS31Q03337 283 aa1.89□□□□□ -2.11
SPT21YMR179W NRT1Q08485 598 aa1.89□□□□□ -2.11
SPT21YMR179W DBP10Q12389 995 aaKnown RBP1.89□□□□□ -2.11
SPT21YMR179W SCO2P38072 301 aa1.89□□□□□ -2.11
SPT21YMR179W CDC1P40986 491 aa1.89□□□□□ -2.11
SPT21YMR179W SLD3P53135 668 aa1.89□□□□□ -2.11
SPT21YMR179W TRI1Q05024 226 aa1.89□□□□□ -2.11
SPT21YMR179W ECM22Q05958 814 aaPredicted RBP1.89□□□□□ -2.11
SPT21YMR179W GSH2Q08220 491 aa1.89□□□□□ -2.11
SPT21YMR179W ERC1P38767 581 aa1.88□□□□□ -2.11
SPT21YMR179W RTT107P38850 1070 aa1.88□□□□□ -2.11
SPT21YMR179W ARB1P40024 610 aaKnown RBP1.88□□□□□ -2.11
SPT21YMR179W YIL169CP40442 995 aa1.88□□□□□ -2.11
SPT21YMR179W POL31P46957 487 aa1.88□□□□□ -2.11
SPT21YMR179W HOL1P53389 586 aa1.88□□□□□ -2.11
SPT21YMR179W EAF7P53911 425 aaKnown RBP1.88□□□□□ -2.11
SPT21YMR179W CRF1Q04930 467 aa1.88□□□□□ -2.11
SPT21YMR179W PTC6P25646 442 aa1.88□□□□□ -2.11
SPT21YMR179W LNP1P38878 278 aa1.88□□□□□ -2.11
SPT21YMR179W VPS41P38959 992 aa1.88□□□□□ -2.11
SPT21YMR179W TPA1P40032 644 aaKnown RBP1.88□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms