RNA–Protein interactions for RNA: YMR161W

HLJ1, Transcript of Co-chaperone for Hsp40p, yeast

Gene HLJ1, Length 675 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HLJ1	YMR161W	RBS1	Q05672	457 aa	Known RBP	5	□□□□□ -1.61
HLJ1	YMR161W	NSE1	Q07913	336 aa		5	□□□□□ -1.61
HLJ1	YMR161W	SMC5	Q08204	1093 aa		5	□□□□□ -1.61
HLJ1	YMR161W	MSC6	Q08818	692 aa	Known RBP	5	□□□□□ -1.61
HLJ1	YMR161W	TIP41	Q12199	356 aa		5	□□□□□ -1.61
HLJ1	YMR161W	RTR2	Q12378	196 aa		5	□□□□□ -1.61
HLJ1	YMR161W	SPO21	Q12411	609 aa		5	□□□□□ -1.61
HLJ1	YMR161W	DDP1	Q99321	188 aa	Known RBP	5	□□□□□ -1.61
HLJ1	YMR161W	FOB1	O13329	566 aa		4.99	□□□□□ -1.61
HLJ1	YMR161W	STF1	P01098	86 aa		4.99	□□□□□ -1.61
HLJ1	YMR161W	GAL1	P04385	528 aa		4.99	□□□□□ -1.61
HLJ1	YMR161W	THS1	P04801	734 aa	Known RBP	4.99	□□□□□ -1.61
HLJ1	YMR161W	CHO2	P05374	869 aa	Known RBP	4.99	□□□□□ -1.61
HLJ1	YMR161W	SNF1	P06782	633 aa	Known RBP	4.99	□□□□□ -1.61
HLJ1	YMR161W	MSD1	P15179	658 aa	Known RBP	4.99	□□□□□ -1.61
HLJ1	YMR161W	STF2	P16965	84 aa		4.99	□□□□□ -1.61
HLJ1	YMR161W	PRP6	P19735	899 aa	Predicted RBP	4.99	□□□□□ -1.61
HLJ1	YMR161W	DBP3	P20447	523 aa	Known RBP	4.99	□□□□□ -1.61
HLJ1	YMR161W	VMA6	P32366	345 aa	Known RBP	4.99	□□□□□ -1.61
HLJ1	YMR161W	BUD2	P33314	1104 aa		4.99	□□□□□ -1.61
HLJ1	YMR161W	CAF4	P36130	643 aa		4.99	□□□□□ -1.61
HLJ1	YMR161W	CCC2	P38995	1004 aa		4.99	□□□□□ -1.61
HLJ1	YMR161W	POP2	P39008	433 aa		4.99	□□□□□ -1.61
HLJ1	YMR161W	RPH1	P39956	796 aa		4.99	□□□□□ -1.61
HLJ1	YMR161W	IES5	P40060	125 aa		4.99	□□□□□ -1.61
HLJ1	YMR161W	MMM1	P41800	426 aa		4.99	□□□□□ -1.61
HLJ1	YMR161W	TMA22	P47089	198 aa	Predicted RBP	4.99	□□□□□ -1.61
HLJ1	YMR161W	GNP1	P48813	663 aa		4.99	□□□□□ -1.61
HLJ1	YMR161W	PAN2	P53010	1115 aa	Predicted RBP	4.99	□□□□□ -1.61
HLJ1	YMR161W	MRM2	P53123	320 aa		4.99	□□□□□ -1.61
HLJ1	YMR161W	PRO2	P54885	456 aa	Known RBP	4.99	□□□□□ -1.61
HLJ1	YMR161W	KIN4	Q01919	800 aa		4.99	□□□□□ -1.61
HLJ1	YMR161W	OYE2	Q03558	400 aa	Known RBP	4.99	□□□□□ -1.61
HLJ1	YMR161W	CDA2	Q06703	312 aa		4.99	□□□□□ -1.61
HLJ1	YMR161W	YDL124W	Q07551	312 aa	Known RBP	4.99	□□□□□ -1.61
HLJ1	YMR161W	SET6	Q12529	373 aa		4.99	□□□□□ -1.61
HLJ1	YMR161W	TOR1	P35169	2470 aa		4.98	□□□□□ -1.61
HLJ1	YMR161W	COQ4	O13525	335 aa		4.98	□□□□□ -1.61
HLJ1	YMR161W	JIP3	O13555	125 aa		4.98	□□□□□ -1.61
HLJ1	YMR161W	KIN2	P13186	1147 aa	Known RBP	4.98	□□□□□ -1.61
HLJ1	YMR161W	STE12	P13574	688 aa		4.98	□□□□□ -1.61
HLJ1	YMR161W	CKA2	P19454	339 aa		4.98	□□□□□ -1.61
HLJ1	YMR161W	RET1	P22276	1149 aa	Known RBP	4.98	□□□□□ -1.61
HLJ1	YMR161W	TRX2	P22803	104 aa	Known RBP	4.98	□□□□□ -1.61
HLJ1	YMR161W	SWI4	P25302	1093 aa	Known RBP	4.98	□□□□□ -1.61
HLJ1	YMR161W	RVS161	P25343	265 aa	Known RBP	4.98	□□□□□ -1.61
HLJ1	YMR161W	EUG1	P32474	517 aa		4.98	□□□□□ -1.61
HLJ1	YMR161W	PPG1	P32838	368 aa		4.98	□□□□□ -1.61
HLJ1	YMR161W	TSA1	P34760	196 aa	Known RBP	4.98	□□□□□ -1.61
HLJ1	YMR161W	GPT2	P36148	743 aa		4.98	□□□□□ -1.61
HLJ1	YMR161W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.98	□□□□□ -1.61	not detected
HLJ1	YMR161W	YMR262W	P38430	313 aa		4.98	□□□□□ -1.61
HLJ1	YMR161W	STM1	P39015	273 aa	Known RBP	4.98	□□□□□ -1.61
HLJ1	YMR161W	LSM1	P47017	172 aa	Known RBP	4.98	□□□□□ -1.61
HLJ1	YMR161W	YJL055W	P47044	245 aa		4.98	□□□□□ -1.61
HLJ1	YMR161W	COX16	P47081	118 aa		4.98	□□□□□ -1.61
HLJ1	YMR161W	BRO1	P48582	844 aa		4.98	□□□□□ -1.61
HLJ1	YMR161W	YGR016W	P53209	190 aa		4.98	□□□□□ -1.61
HLJ1	YMR161W	TMA20	P89886	181 aa	Predicted RBP	4.98	□□□□□ -1.61
HLJ1	YMR161W	RMI1	Q02685	241 aa		4.98	□□□□□ -1.61
HLJ1	YMR161W	YPL109C	Q02981	657 aa		4.98	□□□□□ -1.61
HLJ1	YMR161W	TAF12	Q03761	539 aa		4.98	□□□□□ -1.61
HLJ1	YMR161W	MLC2	Q06580	163 aa		4.98	□□□□□ -1.61
HLJ1	YMR161W	SUB2	Q07478	446 aa	Known RBP	4.98	□□□□□ -1.61
HLJ1	YMR161W	YEH2	Q07950	538 aa		4.98	□□□□□ -1.61
HLJ1	YMR161W	VPS54	Q12071	889 aa		4.98	□□□□□ -1.61
HLJ1	YMR161W	MED2	Q12124	431 aa		4.98	□□□□□ -1.61
HLJ1	YMR161W	NSI1	Q12457	570 aa		4.98	□□□□□ -1.61
HLJ1	YMR161W	CDC8	P00572	216 aa		4.97	□□□□□ -1.61
HLJ1	YMR161W	RPC40	P07703	335 aa	Known RBP	4.97	□□□□□ -1.61
HLJ1	YMR161W	MATALPHA2	P0CY08	210 aa		4.97	□□□□□ -1.61
HLJ1	YMR161W	HMLALPHA2	P0CY09	210 aa		4.97	□□□□□ -1.61
HLJ1	YMR161W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
HLJ1	YMR161W	GAS1	P22146	559 aa	Known RBP	4.97	□□□□□ -1.61
HLJ1	YMR161W	TRX1	P22217	103 aa	Known RBP	4.97	□□□□□ -1.61
HLJ1	YMR161W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
HLJ1	YMR161W	VAM7	P32912	316 aa		4.97	□□□□□ -1.61
HLJ1	YMR161W	PEX6	P33760	1030 aa		4.97	□□□□□ -1.61
HLJ1	YMR161W	WHI3	P34761	661 aa	Known RBP	4.97	□□□□□ -1.61
HLJ1	YMR161W	THI80	P35202	319 aa		4.97	□□□□□ -1.61
HLJ1	YMR161W	TEF4	P36008	412 aa	Known RBP	4.97	□□□□□ -1.61
HLJ1	YMR161W	UBP11	P36026	717 aa		4.97	□□□□□ -1.61
HLJ1	YMR161W	CUE2	P36075	443 aa	Known RBP	4.97	□□□□□ -1.61
HLJ1	YMR161W	YBR138C	P38277	524 aa		4.97	□□□□□ -1.61
HLJ1	YMR161W	BCD1	P38772	366 aa		4.97	□□□□□ -1.61
HLJ1	YMR161W	CTM1	P38818	585 aa		4.97	□□□□□ -1.61
HLJ1	YMR161W	MTG2	P38860	518 aa		4.97	□□□□□ -1.61
HLJ1	YMR161W	MSS4	P38994	779 aa		4.97	□□□□□ -1.61
HLJ1	YMR161W	CCT3	P39077	534 aa	Known RBP	4.97	□□□□□ -1.61
HLJ1	YMR161W	AIM10	P39965	576 aa	Known RBP	4.97	□□□□□ -1.61
HLJ1	YMR161W	PDS1	P40316	373 aa	Predicted RBP	4.97	□□□□□ -1.61
HLJ1	YMR161W	MIC19	P43594	170 aa		4.97	□□□□□ -1.61
HLJ1	YMR161W	CIT3	P43635	486 aa		4.97	□□□□□ -1.61
HLJ1	YMR161W	MNN11	P46985	422 aa	Known RBP	4.97	□□□□□ -1.61
HLJ1	YMR161W	LSM8	P47093	109 aa	Known RBP	4.97	□□□□□ -1.61
HLJ1	YMR161W	BIR1	P47134	954 aa		4.97	□□□□□ -1.61
HLJ1	YMR161W	ABM1	P47146	123 aa		4.97	□□□□□ -1.61
HLJ1	YMR161W	RFX1	P48743	811 aa		4.97	□□□□□ -1.61
HLJ1	YMR161W	TOM22	P49334	152 aa		4.97	□□□□□ -1.61
HLJ1	YMR161W	SOL4	P53315	255 aa		4.97	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 38.3 ms