RNA–Protein interactions for RNA: YMR039C

SUB1, Transcript of Transcriptional coactivator, yeast

Gene SUB1, Length 879 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUB1	YMR039C	KES1	P35844	434 aa	Known RBP	4.25	□□□□□ -1.73
SUB1	YMR039C	VFA1	P40080	203 aa		4.25	□□□□□ -1.73
SUB1	YMR039C	UBP16	Q02863	499 aa		4.25	□□□□□ -1.73
SUB1	YMR039C	TRS31	Q03337	283 aa		4.25	□□□□□ -1.73
SUB1	YMR039C	ASK1	P35734	292 aa		4.24	□□□□□ -1.73
SUB1	YMR039C	FTH1	P38310	465 aa		4.24	□□□□□ -1.73
SUB1	YMR039C	YLF2	P38746	405 aa		4.24	□□□□□ -1.73
SUB1	YMR039C	MTG2	P38860	518 aa		4.24	□□□□□ -1.73
SUB1	YMR039C	LNP1	P38878	278 aa		4.24	□□□□□ -1.73
SUB1	YMR039C	VPS8	P39702	1274 aa		4.24	□□□□□ -1.73
SUB1	YMR039C	SCS2	P40075	244 aa	Known RBP	4.24	□□□□□ -1.73
SUB1	YMR039C	IRC8	P47046	822 aa		4.24	□□□□□ -1.73
SUB1	YMR039C	CNM67	P53865	581 aa	Known RBP	4.24	□□□□□ -1.73
SUB1	YMR039C	PLM2	Q04383	521 aa		4.24	□□□□□ -1.73
SUB1	YMR039C	VAS1	P07806	1104 aa	Known RBP	4.23	□□□□□ -1.73
SUB1	YMR039C	SDS22	P36047	338 aa		4.23	□□□□□ -1.73
SUB1	YMR039C	CFD1	P40558	293 aa		4.23	□□□□□ -1.73
SUB1	YMR039C	NOP2	P40991	618 aa	Known RBP	4.23	□□□□□ -1.73
SUB1	YMR039C	POL31	P46957	487 aa		4.23	□□□□□ -1.73
SUB1	YMR039C	COP1	P53622	1201 aa	Known RBP	4.23	□□□□□ -1.73
SUB1	YMR039C	RAD34	Q06665	692 aa		4.23	□□□□□ -1.73
SUB1	YMR039C	YDL242W	Q07746	117 aa		4.23	□□□□□ -1.73
SUB1	YMR039C	NUR1	Q12066	484 aa		4.23	□□□□□ -1.73
SUB1	YMR039C	YER175W-A	Q8TGU4	54 aa		4.23	□□□□□ -1.73
SUB1	YMR039C	YER190C-B	P0CX94	160 aa		4.22	□□□□□ -1.73
SUB1	YMR039C	YEL077W-A	P0CX95	160 aa		4.22	□□□□□ -1.73
SUB1	YMR039C	YGR296C-B	P0CX96	160 aa		4.22	□□□□□ -1.73
SUB1	YMR039C	YPL283W-B	P0CX97	160 aa		4.22	□□□□□ -1.73
SUB1	YMR039C	YPR204C-A	P0CX98	160 aa		4.22	□□□□□ -1.73
SUB1	YMR039C	SSB1	P11484	613 aa	Known RBP	4.22	□□□□□ -1.73
SUB1	YMR039C	PRE2	P30656	287 aa	Known RBP	4.22	□□□□□ -1.73
SUB1	YMR039C	IMD2	P38697	523 aa	Known RBP	4.22	□□□□□ -1.73
SUB1	YMR039C	ARO9	P38840	513 aa	Predicted RBP	4.22	□□□□□ -1.73
SUB1	YMR039C	SAP1	P39955	897 aa	Known RBP	4.22	□□□□□ -1.73
SUB1	YMR039C	SSB2	P40150	613 aa	Known RBP	4.22	□□□□□ -1.73
SUB1	YMR039C	YIL024C	P40543	189 aa		4.22	□□□□□ -1.73
SUB1	YMR039C	IMD3	P50095	523 aa	Known RBP	4.22	□□□□□ -1.73
SUB1	YMR039C	SCW4	P53334	386 aa	Known RBP	4.22	□□□□□ -1.73
SUB1	YMR039C	LYS21	Q12122	440 aa	Known RBP	4.22	□□□□□ -1.73
SUB1	YMR039C	RTC1	Q08281	1341 aa		4.21	□□□□□ -1.73
SUB1	YMR039C	YPR089W	O13585	888 aa		4.21	□□□□□ -1.74
SUB1	YMR039C	YUR1	P26725	428 aa		4.21	□□□□□ -1.74
SUB1	YMR039C	COQ3	P27680	312 aa		4.21	□□□□□ -1.74
SUB1	YMR039C	SAW1	P39735	261 aa		4.21	□□□□□ -1.74
SUB1	YMR039C	CIN1	P40987	1014 aa		4.21	□□□□□ -1.74
SUB1	YMR039C	SNU56	Q03782	492 aa	Known RBP	4.21	□□□□□ -1.74
SUB1	YMR039C	CRD1	Q07560	283 aa		4.21	□□□□□ -1.74
SUB1	YMR039C	CTT1	P06115	562 aa		4.2	□□□□□ -1.74
SUB1	YMR039C	SES1	P07284	462 aa	Known RBP	4.2	□□□□□ -1.74
SUB1	YMR039C	ILS1	P09436	1072 aa	Known RBP	4.2	□□□□□ -1.74
SUB1	YMR039C	ADH4	P10127	382 aa		4.2	□□□□□ -1.74
SUB1	YMR039C	YMR124W	P39523	943 aa	Known RBP	4.2	□□□□□ -1.74
SUB1	YMR039C	SWD1	P39706	426 aa		4.2	□□□□□ -1.74
SUB1	YMR039C	IMA5	P40884	581 aa		4.2	□□□□□ -1.74
SUB1	YMR039C	FOL1	P53848	824 aa		4.2	□□□□□ -1.74
SUB1	YMR039C	AAT1	Q01802	451 aa		4.2	□□□□□ -1.74
SUB1	YMR039C	MRPL1	Q04599	285 aa		4.2	□□□□□ -1.74
SUB1	YMR039C	CRF1	Q04930	467 aa		4.2	□□□□□ -1.74
SUB1	YMR039C	YML053C	Q04978	212 aa		4.2	□□□□□ -1.74
SUB1	YMR039C	AAD4	Q07747	329 aa		4.2	□□□□□ -1.74
SUB1	YMR039C	YPL191C	Q08930	360 aa		4.2	□□□□□ -1.74
SUB1	YMR039C	RPS7A	P26786	190 aa	Known RBP	4.19	□□□□□ -1.74
SUB1	YMR039C	ARB1	P40024	610 aa	Known RBP	4.19	□□□□□ -1.74
SUB1	YMR039C	SCS3	P53012	380 aa		4.19	□□□□□ -1.74
SUB1	YMR039C	YAT1	P80235	687 aa		4.19	□□□□□ -1.74
SUB1	YMR039C	ACS1	Q01574	713 aa		4.19	□□□□□ -1.74
SUB1	YMR039C	VPS64	Q03944	604 aa		4.19	□□□□□ -1.74
SUB1	YMR039C	GET3	Q12154	354 aa	Known RBP	4.19	□□□□□ -1.74
SUB1	YMR039C	MGM1	P32266	881 aa		4.18	□□□□□ -1.74
SUB1	YMR039C	VBA2	P38358	474 aa	Known RBP	4.18	□□□□□ -1.74
SUB1	YMR039C	ASK10	P48361	1146 aa		4.18	□□□□□ -1.74
SUB1	YMR039C	AIM6	Q07716	390 aa		4.18	□□□□□ -1.74
SUB1	YMR039C	YOR389W	Q08912	624 aa		4.18	□□□□□ -1.74
SUB1	YMR039C	HER1	Q12276	1246 aa		4.18	□□□□□ -1.74
SUB1	YMR039C	ARP7	Q12406	477 aa		4.18	□□□□□ -1.74
SUB1	YMR039C	PXL1	P36166	706 aa		4.17	□□□□□ -1.74
SUB1	YMR039C	STB2	P46679	850 aa		4.17	□□□□□ -1.74
SUB1	YMR039C	YNL034W	P53963	612 aa		4.17	□□□□□ -1.74
SUB1	YMR039C	VTC3	Q02725	835 aa		4.17	□□□□□ -1.74
SUB1	YMR039C	ARA2	Q04212	335 aa		4.17	□□□□□ -1.74
SUB1	YMR039C	TDA9	Q04545	1251 aa		4.17	□□□□□ -1.74
SUB1	YMR039C	YBR255C-A	Q3E776	120 aa		4.17	□□□□□ -1.74
SUB1	YMR039C	YPT1	P01123	206 aa	Known RBP	4.16	□□□□□ -1.74
SUB1	YMR039C	PDE1	P22434	369 aa		4.16	□□□□□ -1.74
SUB1	YMR039C	AIM17	P23180	465 aa	Known RBP	4.16	□□□□□ -1.74
SUB1	YMR039C	YCP4	P25349	247 aa	Known RBP	4.16	□□□□□ -1.74
SUB1	YMR039C	RPF2	P36160	344 aa	Known RBP	4.16	□□□□□ -1.74
SUB1	YMR039C	ERC1	P38767	581 aa		4.16	□□□□□ -1.74
SUB1	YMR039C	TOM71	P38825	639 aa	Known RBP	4.16	□□□□□ -1.74
SUB1	YMR039C	RPL15B	P54780	204 aa	Predicted RBP	4.16	□□□□□ -1.74
SUB1	YMR039C	SWC3	P31376	625 aa		4.15	□□□□□ -1.75
SUB1	YMR039C	GSH1	P32477	678 aa		4.15	□□□□□ -1.75
SUB1	YMR039C	ERV46	P39727	415 aa		4.15	□□□□□ -1.75
SUB1	YMR039C	ESF2	P53743	316 aa	Known RBP	4.15	□□□□□ -1.75
SUB1	YMR039C	CEG1	Q01159	459 aa	Predicted RBP	4.15	□□□□□ -1.75
SUB1	YMR039C	FLO5	P38894	1075 aa		4.14	□□□□□ -1.75
SUB1	YMR039C	TGL2	P54857	326 aa		4.14	□□□□□ -1.75
SUB1	YMR039C	GAL4	P04386	881 aa		4.13	□□□□□ -1.75
SUB1	YMR039C	ILV2	P07342	687 aa	Known RBP	4.13	□□□□□ -1.75
SUB1	YMR039C	PTC6	P25646	442 aa		4.13	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms