RNA–Protein interactions for RNA: YLR307W

CDA1, Transcript of Chitin deacetylase, yeast

Gene CDA1, Length 906 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDA1	YLR307W	TPK1	P06244	397 aa		7.7	□□□□□ -1.18
CDA1	YLR307W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	7.7	□□□□□ -1.18	not detected
CDA1	YLR307W	HSP60	P19882	572 aa	Known RBP	7.7	□□□□□ -1.18
CDA1	YLR307W	SEC14	P24280	304 aa	Known RBP	7.7	□□□□□ -1.18
CDA1	YLR307W	HRR25	P29295	494 aa	Known RBP	7.7	□□□□□ -1.18
CDA1	YLR307W	PMI40	P29952	429 aa	Known RBP	7.7	□□□□□ -1.18
CDA1	YLR307W	PHA2	P32452	334 aa		7.7	□□□□□ -1.18
CDA1	YLR307W	AIM26	P32858	118 aa		7.7	□□□□□ -1.18
CDA1	YLR307W	HSP78	P33416	811 aa		7.7	□□□□□ -1.18
CDA1	YLR307W	NUP120	P35729	1037 aa		7.7	□□□□□ -1.18
CDA1	YLR307W	TGL4	P36165	910 aa		7.7	□□□□□ -1.18
CDA1	YLR307W	PRM9	P39551	298 aa		7.7	□□□□□ -1.18
CDA1	YLR307W	YAT2	P40017	923 aa		7.7	□□□□□ -1.18
CDA1	YLR307W	FIR1	P40020	876 aa		7.7	□□□□□ -1.18
CDA1	YLR307W	MIG2	P53035	382 aa		7.7	□□□□□ -1.18
CDA1	YLR307W	IST1	P53843	298 aa	Predicted RBP	7.7	□□□□□ -1.18
CDA1	YLR307W	KTR6	P54070	446 aa		7.7	□□□□□ -1.18
CDA1	YLR307W	OSH6	Q02201	448 aa		7.7	□□□□□ -1.18
CDA1	YLR307W	RCR2	Q03446	210 aa	Known RBP	7.7	□□□□□ -1.18
CDA1	YLR307W	DIA2	Q08496	732 aa	Predicted RBP	7.7	□□□□□ -1.18
CDA1	YLR307W	SAM3	Q08986	587 aa		7.7	□□□□□ -1.18
CDA1	YLR307W	NBP2	Q12163	236 aa		7.7	□□□□□ -1.18
CDA1	YLR307W	RPL24A	P04449	155 aa	Known RBP	7.69	□□□□□ -1.18
CDA1	YLR307W	CLB4	P24871	460 aa		7.69	□□□□□ -1.18
CDA1	YLR307W	RAD14	P28519	371 aa		7.69	□□□□□ -1.18
CDA1	YLR307W	NDI1	P32340	513 aa		7.69	□□□□□ -1.18
CDA1	YLR307W	HEM12	P32347	362 aa	Predicted RBP	7.69	□□□□□ -1.18
CDA1	YLR307W	SMI1	P32566	505 aa		7.69	□□□□□ -1.18
CDA1	YLR307W	CSE2	P33308	149 aa		7.69	□□□□□ -1.18
CDA1	YLR307W	SIP2	P34164	415 aa	Known RBP	7.69	□□□□□ -1.18
CDA1	YLR307W	DCW1	P36091	449 aa		7.69	□□□□□ -1.18
CDA1	YLR307W	YBR053C	P38235	358 aa		7.69	□□□□□ -1.18
CDA1	YLR307W	YHL026C	P38740	315 aa		7.69	□□□□□ -1.18
CDA1	YLR307W	TRM5	P38793	499 aa		7.69	□□□□□ -1.18
CDA1	YLR307W	RAD55	P38953	406 aa		7.69	□□□□□ -1.18
CDA1	YLR307W	ALD5	P40047	520 aa	Known RBP	7.69	□□□□□ -1.18
CDA1	YLR307W	INP51	P40559	946 aa	Known RBP	7.69	□□□□□ -1.18
CDA1	YLR307W	SEC26	P41810	973 aa	Known RBP	7.69	□□□□□ -1.18
CDA1	YLR307W	AZR1	P50080	613 aa		7.69	□□□□□ -1.18
CDA1	YLR307W	TEL2	P53038	688 aa		7.69	□□□□□ -1.18
CDA1	YLR307W	NCS6	P53088	359 aa		7.69	□□□□□ -1.18
CDA1	YLR307W	UTP8	P53276	713 aa	Known RBP	7.69	□□□□□ -1.18
CDA1	YLR307W	COS6	P53344	381 aa		7.69	□□□□□ -1.18
CDA1	YLR307W	SPC98	P53540	846 aa		7.69	□□□□□ -1.18
CDA1	YLR307W	YNL011C	P53980	444 aa		7.69	□□□□□ -1.18
CDA1	YLR307W	ACL4	Q03771	387 aa		7.69	□□□□□ -1.18
CDA1	YLR307W	CDC123	Q05791	360 aa		7.69	□□□□□ -1.18
CDA1	YLR307W	RSC2	Q06488	889 aa		7.69	□□□□□ -1.18
CDA1	YLR307W	PEX15	Q08215	383 aa		7.69	□□□□□ -1.18
CDA1	YLR307W	REC8	Q12188	680 aa		7.69	□□□□□ -1.18
CDA1	YLR307W	LDB17	Q12342	491 aa		7.69	□□□□□ -1.18
CDA1	YLR307W	STB3	Q12427	513 aa		7.69	□□□□□ -1.18
CDA1	YLR307W	RRP36	Q12481	300 aa	Predicted RBP	7.69	□□□□□ -1.18
CDA1	YLR307W	ENO2	P00925	437 aa	Known RBP	7.68	□□□□□ -1.18
CDA1	YLR307W	CIT2	P08679	460 aa		7.68	□□□□□ -1.18
CDA1	YLR307W	MPH2	P0CD99	609 aa		7.68	□□□□□ -1.18
CDA1	YLR307W	MSD1	P15179	658 aa	Known RBP	7.68	□□□□□ -1.18
CDA1	YLR307W	MET16	P18408	261 aa	Predicted RBP	7.68	□□□□□ -1.18
CDA1	YLR307W	PRP6	P19735	899 aa	Predicted RBP	7.68	□□□□□ -1.18
CDA1	YLR307W	AMD2	P22580	549 aa		7.68	□□□□□ -1.18
CDA1	YLR307W	DGR2	P32330	852 aa		7.68	□□□□□ -1.18
CDA1	YLR307W	RTG1	P32607	177 aa		7.68	□□□□□ -1.18
CDA1	YLR307W	TKL2	P33315	681 aa		7.68	□□□□□ -1.18
CDA1	YLR307W	EAP1	P36041	632 aa	Known RBP	7.68	□□□□□ -1.18
CDA1	YLR307W	TSC10	P38342	320 aa		7.68	□□□□□ -1.18
CDA1	YLR307W	FSH1	P38777	243 aa	Known RBP	7.68	□□□□□ -1.18
CDA1	YLR307W	ATM1	P40416	690 aa		7.68	□□□□□ -1.18
CDA1	YLR307W	YJL132W	P47014	750 aa		7.68	□□□□□ -1.18
CDA1	YLR307W	RNY1	Q02933	434 aa	Known RBP	7.68	□□□□□ -1.18
CDA1	YLR307W	YDR476C	Q03362	224 aa		7.68	□□□□□ -1.18
CDA1	YLR307W	BCP1	Q06338	283 aa		7.68	□□□□□ -1.18
CDA1	YLR307W	TMA46	Q12000	345 aa	Known RBP	7.68	□□□□□ -1.18
CDA1	YLR307W	GPM2	Q12008	311 aa		7.68	□□□□□ -1.18
CDA1	YLR307W	OCA6	Q12454	224 aa		7.68	□□□□□ -1.18
CDA1	YLR307W	INO1	P11986	533 aa		7.67	□□□□□ -1.18
CDA1	YLR307W	MSH2	P25847	964 aa		7.67	□□□□□ -1.18
CDA1	YLR307W	SPR1	P32603	445 aa		7.67	□□□□□ -1.18
CDA1	YLR307W	GDA1	P32621	518 aa		7.67	□□□□□ -1.18
CDA1	YLR307W	SLA2	P33338	968 aa		7.67	□□□□□ -1.18
CDA1	YLR307W	HES1	P35843	434 aa		7.67	□□□□□ -1.18
CDA1	YLR307W	CTP1	P38152	299 aa		7.67	□□□□□ -1.18
CDA1	YLR307W	RIM4	P38741	713 aa		7.67	□□□□□ -1.18
CDA1	YLR307W	LAM1	P38851	1228 aa		7.67	□□□□□ -1.18
CDA1	YLR307W	SHU2	P38957	223 aa		7.67	□□□□□ -1.18
CDA1	YLR307W	YEL028W	P39989	153 aa		7.67	□□□□□ -1.18
CDA1	YLR307W	CDC1	P40986	491 aa		7.67	□□□□□ -1.18
CDA1	YLR307W	RRN7	P40992	514 aa		7.67	□□□□□ -1.18
CDA1	YLR307W	SUM1	P46676	1062 aa		7.67	□□□□□ -1.18
CDA1	YLR307W	RPS10B	P46784	105 aa	Known RBP	7.67	□□□□□ -1.18
CDA1	YLR307W	CCT8	P47079	568 aa	Known RBP	7.67	□□□□□ -1.18
CDA1	YLR307W	NUP84	P52891	726 aa		7.67	□□□□□ -1.18
CDA1	YLR307W	NOP15	P53927	220 aa	Predicted RBP	7.67	□□□□□ -1.18
CDA1	YLR307W	AIM32	Q04689	311 aa		7.67	□□□□□ -1.18
CDA1	YLR307W	ARP9	Q05123	467 aa		7.67	□□□□□ -1.18
CDA1	YLR307W	HRD3	Q05787	833 aa		7.67	□□□□□ -1.18
CDA1	YLR307W	RPS10A	Q08745	105 aa	Predicted RBP	7.67	□□□□□ -1.18
CDA1	YLR307W	SNX3	Q08826	162 aa	Known RBP	7.67	□□□□□ -1.18
CDA1	YLR307W	YPR202W	Q08993	238 aa		7.67	□□□□□ -1.18
CDA1	YLR307W	APC9	Q12107	265 aa		7.67	□□□□□ -1.18
CDA1	YLR307W	RUP1	Q12242	671 aa		7.67	□□□□□ -1.18

Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms