RNA–Protein interactions for RNA: YLR268W

SEC22, Transcript of R-SNARE protein, yeastyeast

Gene SEC22, Length 645 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC22YLR268W HOS2P53096 452 aaPredicted RBP2.97□□□□□ -1.93
SEC22YLR268W COG2P53271 262 aa2.97□□□□□ -1.93
SEC22YLR268W DOS2P54858 310 aa2.97□□□□□ -1.93
SEC22YLR268W MTQ2Q03920 221 aaPredicted RBP2.97□□□□□ -1.93
SEC22YLR268W ARA2Q04212 335 aa2.97□□□□□ -1.93
SEC22YLR268W YLR281CQ05863 155 aa2.97□□□□□ -1.93
SEC22YLR268W RAD34Q06665 692 aa2.97□□□□□ -1.93
SEC22YLR268W NUP145P49687 1317 aa2.96□□□□□ -1.93
SEC22YLR268W CNA1P23287 553 aa2.96□□□□□ -1.94
SEC22YLR268W PPZ1P26570 692 aa2.96□□□□□ -1.94
SEC22YLR268W YBR139WP38109 508 aa2.96□□□□□ -1.94
SEC22YLR268W PEA2P40091 420 aa2.96□□□□□ -1.94
SEC22YLR268W RNR4P49723 345 aaKnown RBP2.96□□□□□ -1.94
SEC22YLR268W PEF1P53238 335 aa2.96□□□□□ -1.94
SEC22YLR268W MDR1P53258 950 aa2.96□□□□□ -1.94
SEC22YLR268W PFA4Q12006 378 aa2.96□□□□□ -1.94
SEC22YLR268W SEC18P18759 758 aaKnown RBP2.95□□□□□ -1.94
SEC22YLR268W PLC1P32383 869 aa2.95□□□□□ -1.94
SEC22YLR268W RMA1P36001 430 aaKnown RBP2.95□□□□□ -1.94
SEC22YLR268W RKM3P38222 552 aa2.95□□□□□ -1.94
SEC22YLR268W FAT1P38225 669 aa2.95□□□□□ -1.94
SEC22YLR268W MAM1P40065 302 aa2.95□□□□□ -1.94
SEC22YLR268W SAD1P43589 448 aa2.95□□□□□ -1.94
SEC22YLR268W YPT11P48559 417 aa2.95□□□□□ -1.94
SEC22YLR268W DNM1P54861 757 aa2.95□□□□□ -1.94
SEC22YLR268W BET4Q00618 327 aa2.95□□□□□ -1.94
SEC22YLR268W UME1Q03010 460 aa2.95□□□□□ -1.94
SEC22YLR268W LCB4Q12246 624 aa2.95□□□□□ -1.94
SEC22YLR268W RRI1Q12468 440 aa2.95□□□□□ -1.94
SEC22YLR268W YER175W-AQ8TGU4 54 aa2.95□□□□□ -1.94
SEC22YLR268W Q0010Q9ZZX9 128 aa2.95□□□□□ -1.94
SEC22YLR268W RRP43P25359 394 aaPredicted RBP2.94□□□□□ -1.94
SEC22YLR268W YOR389WQ08912 624 aa2.94□□□□□ -1.94
SEC22YLR268W YGR161W-CQ3E744 92 aa2.94□□□□□ -1.94
SEC22YLR268W RTC1Q08281 1341 aa2.93□□□□□ -1.94
SEC22YLR268W RPS21AP0C0V8 87 aaKnown RBP2.93□□□□□ -1.94
SEC22YLR268W YJL107CP42947 387 aa2.93□□□□□ -1.94
SEC22YLR268W PLM2Q04383 521 aa2.93□□□□□ -1.94
SEC22YLR268W GSH2Q08220 491 aa2.93□□□□□ -1.94
SEC22YLR268W AMD2P22580 549 aa2.92□□□□□ -1.94
SEC22YLR268W ERV46P39727 415 aa2.92□□□□□ -1.94
SEC22YLR268W YND1P40009 630 aa2.92□□□□□ -1.94
SEC22YLR268W YJR142WP47173 342 aa2.92□□□□□ -1.94
SEC22YLR268W FAP7Q12055 197 aaPredicted RBP2.92□□□□□ -1.94
SEC22YLR268W SRP68P38687 599 aaKnown RBP2.91□□□□□ -1.94
SEC22YLR268W LNP1P38878 278 aa2.91□□□□□ -1.94
SEC22YLR268W DHH1P39517 506 aaKnown RBP2.91□□□□□ -1.94
SEC22YLR268W PCL6P40038 420 aa2.91□□□□□ -1.94
SEC22YLR268W YNL144CP53907 740 aa2.91□□□□□ -1.94
SEC22YLR268W YML119WQ03208 357 aa2.91□□□□□ -1.94
SEC22YLR268W ECM16Q04217 1267 aaKnown RBP2.91□□□□□ -1.94
SEC22YLR268W SMA2Q04658 369 aa2.91□□□□□ -1.94
SEC22YLR268W ECM22Q05958 814 aaPredicted RBP2.91□□□□□ -1.94
SEC22YLR268W NGL1Q08213 363 aaKnown RBP2.91□□□□□ -1.94
SEC22YLR268W NOP56Q12460 504 aaKnown RBP RIP-Chip data2.91□□□□□ -1.94not detected
SEC22YLR268W KGD2P19262 463 aaPredicted RBP2.9□□□□□ -1.95
SEC22YLR268W CWH43P25618 953 aa2.9□□□□□ -1.95
SEC22YLR268W HXT4P32467 576 aa2.9□□□□□ -1.95
SEC22YLR268W SAP1P39955 897 aaKnown RBP2.9□□□□□ -1.95
SEC22YLR268W ORC5P50874 479 aa2.9□□□□□ -1.95
SEC22YLR268W UBP16Q02863 499 aa2.9□□□□□ -1.95
SEC22YLR268W YPR027CQ12079 277 aa2.9□□□□□ -1.95
SEC22YLR268W VPS5Q92331 675 aa2.9□□□□□ -1.95
SEC22YLR268W ARN1P38731 627 aa2.89□□□□□ -1.95
SEC22YLR268W VPS8P39702 1274 aa2.89□□□□□ -1.95
SEC22YLR268W YGR237CP50089 785 aa2.89□□□□□ -1.95
SEC22YLR268W YGL081WP53156 320 aa2.89□□□□□ -1.95
SEC22YLR268W DIG1Q03063 452 aaKnown RBP2.89□□□□□ -1.95
SEC22YLR268W GPN2Q08726 347 aaPredicted RBP2.89□□□□□ -1.95
SEC22YLR268W HOS1Q12214 470 aa2.89□□□□□ -1.95
SEC22YLR268W RMP1Q12530 201 aa2.89□□□□□ -1.95
SEC22YLR268W SES1P07284 462 aaKnown RBP2.88□□□□□ -1.95
SEC22YLR268W PRP16P15938 1071 aaPredicted RBP2.88□□□□□ -1.95
SEC22YLR268W NIC96P34077 839 aa2.88□□□□□ -1.95
SEC22YLR268W IMP4P53941 290 aaKnown RBP2.88□□□□□ -1.95
SEC22YLR268W YAT1P80235 687 aa2.88□□□□□ -1.95
SEC22YLR268W ACS1Q01574 713 aa2.88□□□□□ -1.95
SEC22YLR268W SKY1Q03656 742 aa2.88□□□□□ -1.95
SEC22YLR268W FMP42Q04991 504 aa2.88□□□□□ -1.95
SEC22YLR268W RPL42AP0CX27 106 aaKnown RBP2.87□□□□□ -1.95
SEC22YLR268W RPL42BP0CX28 106 aaKnown RBP2.87□□□□□ -1.95
SEC22YLR268W CDC23P16522 626 aa2.87□□□□□ -1.95
SEC22YLR268W GSH1P32477 678 aa2.87□□□□□ -1.95
SEC22YLR268W BZZ1P38822 633 aa2.87□□□□□ -1.95
SEC22YLR268W GPP1P41277 250 aaKnown RBP2.87□□□□□ -1.95
SEC22YLR268W COS12P53053 380 aa2.87□□□□□ -1.95
SEC22YLR268W YNR029CP53729 429 aaKnown RBP2.87□□□□□ -1.95
SEC22YLR268W YDL242WQ07746 117 aa2.87□□□□□ -1.95
SEC22YLR268W TPA1P40032 644 aaKnown RBP2.86□□□□□ -1.95
SEC22YLR268W QRI7P43122 407 aa2.86□□□□□ -1.95
SEC22YLR268W FCP1Q03254 732 aa2.86□□□□□ -1.95
SEC22YLR268W SND1Q04007 877 aa2.86□□□□□ -1.95
SEC22YLR268W YPL191CQ08930 360 aa2.86□□□□□ -1.95
SEC22YLR268W PRP45P28004 379 aaPredicted RBP2.85□□□□□ -1.95
SEC22YLR268W SWC3P31376 625 aa2.85□□□□□ -1.95
SEC22YLR268W MNN2P38069 597 aa2.85□□□□□ -1.95
SEC22YLR268W IRC5P43610 853 aa2.85□□□□□ -1.95
SEC22YLR268W IDS2P46958 469 aa2.85□□□□□ -1.95
SEC22YLR268W SPC105P53148 917 aa2.85□□□□□ -1.95
SEC22YLR268W HOL1P53389 586 aa2.85□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms