RNA–Protein interactions for RNA: YLR214W

FRE1, Transcript of Ferric reductase and cupric reductase, yeast

Gene FRE1, Length 2,061 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FRE1	YLR214W	SGF73	P53165	657 aa		4.82	□□□□□ -1.64
FRE1	YLR214W	PGA2	P53903	129 aa		4.82	□□□□□ -1.64
FRE1	YLR214W	MEC3	Q02574	474 aa		4.82	□□□□□ -1.64
FRE1	YLR214W	SEG1	Q04279	960 aa		4.82	□□□□□ -1.64
FRE1	YLR214W	GYL1	Q04322	720 aa		4.82	□□□□□ -1.64
FRE1	YLR214W	SPC24	Q04477	213 aa		4.82	□□□□□ -1.64
FRE1	YLR214W	GIM5	Q04493	163 aa		4.82	□□□□□ -1.64
FRE1	YLR214W	PML1	Q07930	204 aa	Predicted RBP	4.82	□□□□□ -1.64
FRE1	YLR214W	TGS1	Q12052	315 aa		4.82	□□□□□ -1.64
FRE1	YLR214W	YDL109C	Q12103	647 aa		4.82	□□□□□ -1.64
FRE1	YLR214W	YOL114C	Q12322	202 aa		4.82	□□□□□ -1.64
FRE1	YLR214W	TUS1	Q06412	1307 aa		4.81	□□□□□ -1.64
FRE1	YLR214W	ADE3	P07245	946 aa	Known RBP	4.81	□□□□□ -1.64
FRE1	YLR214W	NGG1	P32494	702 aa		4.81	□□□□□ -1.64
FRE1	YLR214W	RRP1	P35178	278 aa	Predicted RBP	4.81	□□□□□ -1.64
FRE1	YLR214W	ADE17	P38009	592 aa	Known RBP	4.81	□□□□□ -1.64
FRE1	YLR214W	KSP1	P38691	1029 aa	Known RBP	4.81	□□□□□ -1.64
FRE1	YLR214W	YHL017W	P38745	532 aa		4.81	□□□□□ -1.64
FRE1	YLR214W	HXT13	P39924	564 aa		4.81	□□□□□ -1.64
FRE1	YLR214W	EDC3	P39998	551 aa	Known RBP	4.81	□□□□□ -1.64
FRE1	YLR214W	CCT5	P40413	562 aa	Known RBP	4.81	□□□□□ -1.64
FRE1	YLR214W	YIL165C	P40446	119 aa		4.81	□□□□□ -1.64
FRE1	YLR214W	UTP8	P53276	713 aa	Known RBP	4.81	□□□□□ -1.64
FRE1	YLR214W	HXT17	P53631	564 aa		4.81	□□□□□ -1.64
FRE1	YLR214W	HXT15	P54854	567 aa		4.81	□□□□□ -1.64
FRE1	YLR214W	FMP30	Q02883	468 aa		4.81	□□□□□ -1.64
FRE1	YLR214W	RSN1	Q03516	953 aa		4.81	□□□□□ -1.64
FRE1	YLR214W	YLR456W	Q06199	204 aa		4.81	□□□□□ -1.64
FRE1	YLR214W	TGL5	Q12043	749 aa		4.81	□□□□□ -1.64
FRE1	YLR214W	HER1	Q12276	1246 aa		4.81	□□□□□ -1.64
FRE1	YLR214W	SGS1	P35187	1447 aa		4.81	□□□□□ -1.64
FRE1	YLR214W	BI4	P03879	638 aa		4.81	□□□□□ -1.64
FRE1	YLR214W	SBP1	P10080	294 aa	Known RBP	4.81	□□□□□ -1.64
FRE1	YLR214W	DAL3	P32459	195 aa		4.81	□□□□□ -1.64
FRE1	YLR214W	ERG1	P32476	496 aa	Known RBP	4.81	□□□□□ -1.64
FRE1	YLR214W	SRP101	P32916	621 aa		4.81	□□□□□ -1.64
FRE1	YLR214W	OCT1	P35999	772 aa		4.81	□□□□□ -1.64
FRE1	YLR214W	OLA1	P38219	394 aa	Known RBP	4.81	□□□□□ -1.64
FRE1	YLR214W	YHR182W	P38870	785 aa		4.81	□□□□□ -1.64
FRE1	YLR214W	FLC2	P39719	783 aa		4.81	□□□□□ -1.64
FRE1	YLR214W	YIL089W	P40500	205 aa		4.81	□□□□□ -1.64
FRE1	YLR214W	CEP3	P40969	608 aa		4.81	□□□□□ -1.64
FRE1	YLR214W	AAD14	P42884	376 aa		4.81	□□□□□ -1.64
FRE1	YLR214W	ALB1	P47019	175 aa	Predicted RBP	4.81	□□□□□ -1.64
FRE1	YLR214W	MDV1	P47025	714 aa		4.81	□□□□□ -1.64
FRE1	YLR214W	MCM6	P53091	1017 aa	Known RBP	4.81	□□□□□ -1.64
FRE1	YLR214W	ART5	P53244	586 aa	Known RBP	4.81	□□□□□ -1.64
FRE1	YLR214W	FCP1	Q03254	732 aa		4.81	□□□□□ -1.64
FRE1	YLR214W	AIM32	Q04689	311 aa		4.81	□□□□□ -1.64
FRE1	YLR214W	HDA2	Q06629	674 aa		4.81	□□□□□ -1.64
FRE1	YLR214W	SNA4	Q07549	140 aa		4.81	□□□□□ -1.64
FRE1	YLR214W	LDB17	Q12342	491 aa		4.81	□□□□□ -1.64
FRE1	YLR214W	RTN2	Q12443	393 aa		4.81	□□□□□ -1.64
FRE1	YLR214W	HXK2	P04807	486 aa	Known RBP	4.8	□□□□□ -1.64
FRE1	YLR214W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.8	□□□□□ -1.64	not detected
FRE1	YLR214W	APE1	P14904	514 aa		4.8	□□□□□ -1.64
FRE1	YLR214W	SEC63	P14906	663 aa		4.8	□□□□□ -1.64
FRE1	YLR214W	BOS1	P25385	244 aa		4.8	□□□□□ -1.64
FRE1	YLR214W	YCR016W	P25617	290 aa	Known RBP	4.8	□□□□□ -1.64
FRE1	YLR214W	HXT1	P32465	570 aa		4.8	□□□□□ -1.64
FRE1	YLR214W	SUA5	P32579	426 aa		4.8	□□□□□ -1.64
FRE1	YLR214W	AFG2	P32794	780 aa		4.8	□□□□□ -1.64
FRE1	YLR214W	YKL063C	P35725	167 aa		4.8	□□□□□ -1.64
FRE1	YLR214W	BIT2	P38346	545 aa		4.8	□□□□□ -1.64
FRE1	YLR214W	PIK1	P39104	1066 aa		4.8	□□□□□ -1.64
FRE1	YLR214W	THO1	P40040	218 aa	Known RBP	4.8	□□□□□ -1.64
FRE1	YLR214W	ALG5	P40350	334 aa		4.8	□□□□□ -1.64
FRE1	YLR214W	LOH1	P47055	219 aa		4.8	□□□□□ -1.64
FRE1	YLR214W	ECL1	P48235	211 aa		4.8	□□□□□ -1.64
FRE1	YLR214W	GCV2	P49095	1034 aa		4.8	□□□□□ -1.64
FRE1	YLR214W	MET13	P53128	600 aa		4.8	□□□□□ -1.64
FRE1	YLR214W	CAF130	P53280	1122 aa	Predicted RBP	4.8	□□□□□ -1.64
FRE1	YLR214W	YNR040W	P53736	256 aa		4.8	□□□□□ -1.64
FRE1	YLR214W	KRE33	P53914	1056 aa	Known RBP	4.8	□□□□□ -1.64
FRE1	YLR214W	MOT3	P54785	490 aa	Known RBP	4.8	□□□□□ -1.64
FRE1	YLR214W	YLR455W	Q06188	304 aa		4.8	□□□□□ -1.64
FRE1	YLR214W	HIM1	Q06674	414 aa		4.8	□□□□□ -1.64
FRE1	YLR214W	ARG3	P05150	338 aa		4.79	□□□□□ -1.64
FRE1	YLR214W	SNF1	P06782	633 aa	Known RBP	4.79	□□□□□ -1.64
FRE1	YLR214W	SSC1	P0CS90	654 aa	Known RBP	4.79	□□□□□ -1.64
FRE1	YLR214W	YAK1	P14680	807 aa		4.79	□□□□□ -1.64
FRE1	YLR214W	OLE1	P21147	510 aa	Known RBP	4.79	□□□□□ -1.64
FRE1	YLR214W	UTR1	P21373	530 aa		4.79	□□□□□ -1.64
FRE1	YLR214W	DPB2	P24482	689 aa	Predicted RBP	4.79	□□□□□ -1.64
FRE1	YLR214W	ABD1	P32783	436 aa	Predicted RBP	4.79	□□□□□ -1.64
FRE1	YLR214W	COT1	P32798	439 aa		4.79	□□□□□ -1.64
FRE1	YLR214W	SLC1	P33333	303 aa		4.79	□□□□□ -1.64
FRE1	YLR214W	GCS1	P35197	352 aa		4.79	□□□□□ -1.64
FRE1	YLR214W	SHM2	P37291	469 aa	Known RBP	4.79	□□□□□ -1.64
FRE1	YLR214W	VRP1	P37370	817 aa		4.79	□□□□□ -1.64
FRE1	YLR214W	AXL2	P38928	823 aa		4.79	□□□□□ -1.64
FRE1	YLR214W	YER137C	P40083	148 aa	Known RBP	4.79	□□□□□ -1.64
FRE1	YLR214W	YER156C	P40093	338 aa	Known RBP	4.79	□□□□□ -1.64
FRE1	YLR214W	THI6	P41835	540 aa		4.79	□□□□□ -1.64
FRE1	YLR214W	YJR096W	P47137	282 aa		4.79	□□□□□ -1.64
FRE1	YLR214W	SKP1	P52286	194 aa		4.79	□□□□□ -1.64
FRE1	YLR214W	CBK1	P53894	756 aa		4.79	□□□□□ -1.64
FRE1	YLR214W	ARO80	Q04052	950 aa		4.79	□□□□□ -1.64
FRE1	YLR214W	YTM1	Q12024	460 aa	Predicted RBP	4.79	□□□□□ -1.64
FRE1	YLR214W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.79	□□□□□ -1.64	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms