RNA–Protein interactions for RNA: YLR003C

CMS1, Transcript of Putative subunit of the 90S preribosome processome complex, yeastyeast

Gene CMS1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CMS1YLR003C BET4Q00618 327 aa3.28□□□□□ -1.88
CMS1YLR003C PFA4Q12006 378 aa3.28□□□□□ -1.88
CMS1YLR003C SEC18P18759 758 aaKnown RBP3.27□□□□□ -1.89
CMS1YLR003C BET2P20133 325 aa3.27□□□□□ -1.89
CMS1YLR003C CDC5P32562 705 aa3.27□□□□□ -1.89
CMS1YLR003C SER1P33330 395 aaKnown RBP3.27□□□□□ -1.89
CMS1YLR003C RMA1P36001 430 aaKnown RBP3.27□□□□□ -1.89
CMS1YLR003C RAD26P40352 1085 aa3.27□□□□□ -1.89
CMS1YLR003C YGL081WP53156 320 aa3.27□□□□□ -1.89
CMS1YLR003C FCP1Q03254 732 aa3.27□□□□□ -1.89
CMS1YLR003C YLR281CQ05863 155 aa3.27□□□□□ -1.89
CMS1YLR003C YER175W-AQ8TGU4 54 aa3.27□□□□□ -1.89
CMS1YLR003C PRP16P15938 1071 aaPredicted RBP3.26□□□□□ -1.89
CMS1YLR003C CNA1P23287 553 aa3.26□□□□□ -1.89
CMS1YLR003C GRX4P32642 244 aa3.26□□□□□ -1.89
CMS1YLR003C RKM3P38222 552 aa3.26□□□□□ -1.89
CMS1YLR003C UBP12P39538 1254 aa3.26□□□□□ -1.89
CMS1YLR003C GZF3P42944 551 aaKnown RBP3.26□□□□□ -1.89
CMS1YLR003C PTA1Q01329 785 aaPredicted RBP3.26□□□□□ -1.89
CMS1YLR003C ECM22Q05958 814 aaPredicted RBP3.26□□□□□ -1.89
CMS1YLR003C YOR389WQ08912 624 aa3.26□□□□□ -1.89
CMS1YLR003C RRI1Q12468 440 aa3.26□□□□□ -1.89
CMS1YLR003C APM4Q99186 491 aa3.26□□□□□ -1.89
CMS1YLR003C DSS4P32601 143 aa3.25□□□□□ -1.89
CMS1YLR003C YND1P40009 630 aa3.25□□□□□ -1.89
CMS1YLR003C GPG1P53130 126 aa3.25□□□□□ -1.89
CMS1YLR003C DIG1Q03063 452 aaKnown RBP3.25□□□□□ -1.89
CMS1YLR003C GSH2Q08220 491 aa3.25□□□□□ -1.89
CMS1YLR003C YTM1Q12024 460 aaPredicted RBP3.25□□□□□ -1.89
CMS1YLR003C SSB1P11484 613 aaKnown RBP3.24□□□□□ -1.89
CMS1YLR003C ATP12P22135 325 aa3.24□□□□□ -1.89
CMS1YLR003C DAL3P32459 195 aa3.24□□□□□ -1.89
CMS1YLR003C SSB2P40150 613 aaKnown RBP3.24□□□□□ -1.89
CMS1YLR003C NOP2P40991 618 aaKnown RBP3.24□□□□□ -1.89
CMS1YLR003C GPP1P41277 250 aaKnown RBP3.24□□□□□ -1.89
CMS1YLR003C COG2P53271 262 aa3.24□□□□□ -1.89
CMS1YLR003C SQS1P53866 767 aaKnown RBP3.24□□□□□ -1.89
CMS1YLR003C ARA2Q04212 335 aa3.24□□□□□ -1.89
CMS1YLR003C ECM16Q04217 1267 aaKnown RBP3.24□□□□□ -1.89
CMS1YLR003C LYS21Q12122 440 aaKnown RBP3.24□□□□□ -1.89
CMS1YLR003C RTC1Q08281 1341 aa3.23□□□□□ -1.89
CMS1YLR003C KES1P35844 434 aaKnown RBP3.23□□□□□ -1.89
CMS1YLR003C EXO84P38261 753 aa3.23□□□□□ -1.89
CMS1YLR003C LAS21P40367 830 aa3.23□□□□□ -1.89
CMS1YLR003C MNN11P46985 422 aaKnown RBP3.23□□□□□ -1.89
CMS1YLR003C YNL144CP53907 740 aa3.23□□□□□ -1.89
CMS1YLR003C YML119WQ03208 357 aa3.23□□□□□ -1.89
CMS1YLR003C NGL1Q08213 363 aaKnown RBP3.23□□□□□ -1.89
CMS1YLR003C TRE2Q08693 809 aa3.23□□□□□ -1.89
CMS1YLR003C TMA17Q12513 150 aa3.23□□□□□ -1.89
CMS1YLR003C DGR2P32330 852 aa3.22□□□□□ -1.89
CMS1YLR003C RRP8P38961 392 aaKnown RBP3.22□□□□□ -1.89
CMS1YLR003C YJR120WP47157 116 aa3.22□□□□□ -1.89
CMS1YLR003C RAD34Q06665 692 aa3.22□□□□□ -1.89
CMS1YLR003C RRP43P25359 394 aaPredicted RBP3.21□□□□□ -1.9
CMS1YLR003C IMP4P53941 290 aaKnown RBP3.21□□□□□ -1.9
CMS1YLR003C GPN2Q08726 347 aaPredicted RBP3.21□□□□□ -1.9
CMS1YLR003C RSA1Q08932 381 aa3.21□□□□□ -1.9
CMS1YLR003C YPR027CQ12079 277 aa3.21□□□□□ -1.9
CMS1YLR003C TIP41Q12199 356 aa3.21□□□□□ -1.9
CMS1YLR003C NOP56Q12460 504 aaKnown RBP RIP-Chip data3.21□□□□□ -1.9not detected
CMS1YLR003C RMP1Q12530 201 aa3.21□□□□□ -1.9
CMS1YLR003C RPL42AP0CX27 106 aaKnown RBP3.2□□□□□ -1.9
CMS1YLR003C RPL42BP0CX28 106 aaKnown RBP3.2□□□□□ -1.9
CMS1YLR003C DID4P36108 232 aa3.2□□□□□ -1.9
CMS1YLR003C SDH8P38345 138 aa3.2□□□□□ -1.9
CMS1YLR003C FAA2P39518 744 aa3.2□□□□□ -1.9
CMS1YLR003C YJL107CP42947 387 aa3.2□□□□□ -1.9
CMS1YLR003C RNR4P49723 345 aaKnown RBP3.2□□□□□ -1.9
CMS1YLR003C FOL1P53848 824 aa3.2□□□□□ -1.9
CMS1YLR003C FMP42Q04991 504 aa3.2□□□□□ -1.9
CMS1YLR003C Q0010Q9ZZX9 128 aa3.2□□□□□ -1.9
CMS1YLR003C CHO2P05374 869 aaKnown RBP3.19□□□□□ -1.9
CMS1YLR003C SEC12P11655 471 aa3.19□□□□□ -1.9
CMS1YLR003C KAR1P11927 433 aa3.19□□□□□ -1.9
CMS1YLR003C PLC1P32383 869 aa3.19□□□□□ -1.9
CMS1YLR003C TFC4P33339 1025 aa3.19□□□□□ -1.9
CMS1YLR003C STB5P38699 743 aa3.19□□□□□ -1.9
CMS1YLR003C ERV46P39727 415 aa3.19□□□□□ -1.9
CMS1YLR003C ROK1P45818 564 aaPredicted RBP3.19□□□□□ -1.9
CMS1YLR003C PEF1P53238 335 aa3.19□□□□□ -1.9
CMS1YLR003C PLM2Q04383 521 aa3.19□□□□□ -1.9
CMS1YLR003C CBP3P21560 335 aa3.18□□□□□ -1.9
CMS1YLR003C AEP2P22136 580 aa3.18□□□□□ -1.9
CMS1YLR003C AMD2P22580 549 aa3.18□□□□□ -1.9
CMS1YLR003C ARG1P22768 420 aa3.18□□□□□ -1.9
CMS1YLR003C NIC96P34077 839 aa3.18□□□□□ -1.9
CMS1YLR003C BZZ1P38822 633 aa3.18□□□□□ -1.9
CMS1YLR003C MAM1P40065 302 aa3.18□□□□□ -1.9
CMS1YLR003C PEA2P40091 420 aa3.18□□□□□ -1.9
CMS1YLR003C PEX14P53112 341 aa3.18□□□□□ -1.9
CMS1YLR003C SPC105P53148 917 aa3.18□□□□□ -1.9
CMS1YLR003C GRX7P38068 203 aa3.17□□□□□ -1.9
CMS1YLR003C PCL6P40038 420 aa3.17□□□□□ -1.9
CMS1YLR003C AZF1P41696 914 aa3.17□□□□□ -1.9
CMS1YLR003C ORC5P50874 479 aa3.17□□□□□ -1.9
CMS1YLR003C MDR1P53258 950 aa3.17□□□□□ -1.9
CMS1YLR003C SND1Q04007 877 aa3.17□□□□□ -1.9
CMS1YLR003C CDC23P16522 626 aa3.16□□□□□ -1.9
CMS1YLR003C GSH1P32477 678 aa3.16□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms